Kimmen V. Sjölander
Affiliations: | Bioengineering, Plant & Microbial Biology | University of California, Berkeley, Berkeley, CA, United States |
Area:
Phylogenomics, protein informaticsWebsite:
http://phylogenomics.berkeley.edu/members/kimmen/Google:
"Kimmen Sjölander"Cross-listing: BME Tree
Children
Sign in to add trainee| Carolina Dallett | grad student | UC Berkeley | |
| Ruchira S. Datta | post-doc | 2007- | UC Berkeley |
| Bryan Kolaczkowski | post-doc | 2008-2009 | UC Berkeley (Evolution Tree) |
BETA: Related publications
See more...
Publications
|
You can help our author matching system! If you notice any publications incorrectly attributed to this author, please sign in and mark matches as correct or incorrect. |
| Afrasiabi C, Samad B, Dineen D, et al. (2013) The PhyloFacts FAT-CAT web server: ortholog identification and function prediction using fast approximate tree classification. Nucleic Acids Research. 41: W242-8 |
| Liberles DA, Teichmann SA, Bahar I, et al. (2012) The interface of protein structure, protein biophysics, and molecular evolution. Protein Science : a Publication of the Protein Society. 21: 769-85 |
| Alterovitz R, Arvey A, Sankararaman S, et al. (2009) ResBoost: characterizing and predicting catalytic residues in enzymes. Bmc Bioinformatics. 10: 197 |
| Sankararaman S, Kolaczkowski B, Sjölander K. (2009) INTREPID: a web server for prediction of functionally important residues by evolutionary analysis. Nucleic Acids Research. 37: W390-5 |
| Sankararaman S, Sjölander K. (2008) INTREPID--INformation-theoretic TREe traversal for Protein functional site IDentification. Bioinformatics (Oxford, England). 24: 2445-52 |
| Brown DP, Krishnamurthy N, Sjölander K. (2007) Automated protein subfamily identification and classification. Plos Computational Biology. 3: e160 |
| Krishnamurthy N, Brown DP, Kirshner D, et al. (2006) PhyloFacts: an online structural phylogenomic encyclopedia for protein functional and structural classification. Genome Biology. 7: R83 |
| Chisholm ST, Dahlbeck D, Krishnamurthy N, et al. (2005) Molecular characterization of proteolytic cleavage sites of the Pseudomonas syringae effector AvrRpt2. Proceedings of the National Academy of Sciences of the United States of America. 102: 2087-92 |
| Middleton R, Sjölander K, Krishnamurthy N, et al. (2005) Predicted hexameric structure of the Agrobacterium VirB4 C terminus suggests VirB4 acts as a docking site during type IV secretion. Proceedings of the National Academy of Sciences of the United States of America. 102: 1685-90 |
| Kleffmann T, Russenberger D, von Zychlinski A, et al. (2004) The Arabidopsis thaliana chloroplast proteome reveals pathway abundance and novel protein functions. Current Biology : Cb. 14: 354-62 |