Bernhard O. Palsson, PhD

Affiliations: 
1984-1995 Chemical Engineering University of Michigan, Ann Arbor, Ann Arbor, MI 
 1995- Bioengineering University of California, San Diego, La Jolla, CA 
Website:
http://systemsbiology.ucsd.edu/Researchers/Palsson
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"Bernhard Palsson"
Bio:

Department of Bioengineering, University of California, San Diego La Jolla, CA 92093-0412, USA

Children

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Abhay Joshi grad student 1988 University of Michigan
Gyun Min Lee grad student 1990 University of Michigan
Sadettin Ozturk grad student 1990 University of Michigan
Craig Halberstadt grad student 1991 University of Michigan
Minoo Javanmardian grad student 1991 University of Michigan
Jay D. Keasling grad student 1991 University of Michigan (Chemistry Tree)
Joanne Savinell grad student 1991 University of Michigan
Richard M. Schwartz grad student 1991 University of Michigan
Amit Varma grad student 1993 University of Michigan
Choul Gyun Lee grad student 1994 University of Michigan
Ramkumar Mandalam grad student 1994 University of Michigan
Alice Chuck grad student 1995 University of Michigan
Ching An Peng grad student 1995 University of Michigan
Stylianos Andreadis grad student 1996 University of Michigan
Jeremy S. Edwards grad student 1999 UCSD
Karl Francis grad student 1999 UCSD
Christophe Schilling grad student 2000 UCSD
Markus Willard Covert grad student 2003 UCSD
Sharon Jane Wiback grad student 2003 UCSD
Iman Famili grad student 2004 UCSD
Stephen Sailoong Fong grad student 2004 UCSD
Markus Juhana Herrgard grad student 2004 UCSD
Jason A. Papin grad student 2004 UCSD
Timothy Eric Allen grad student 2005 UCSD
Nathan Daniel Price grad student 2005 UCSD
Jennifer Leanne Reed grad student 2005 UCSD
Natalie Christine Hurlen grad student 2006 UCSD
Thuy D. Vo grad student 2006 UCSD
Scott Anthony Becker grad student 2007 UCSD
Andrew Robert Joyce grad student 2007 UCSD
Adam Michael Feist grad student 2008 UCSD
Neema Jamshidi grad student 2009 UCSD
Monica L. Mo grad student 2009 UCSD
Ines Thiele grad student 2009 UCSD
Margaret Kenyon Applebee grad student 2010 UCSD
Thomas Conrad grad student 2010 UCSD
Vasiliy A. Portnoy grad student 2010 UCSD
Jan Schellenberger grad student 2010 UCSD
Roger Larken Chang grad student 2012 UCSD
Nathan Enoch Lewis grad student 2012 UCSD
Harish Nagarajan grad student 2012 UCSD
Jeffrey David Orth grad student 2012 UCSD
Aarash Bordbar grad student 2014 UCSD
Mallory Embree grad student 2014 UCSD
Stephen Federowicz grad student 2014 UCSD
Donghyuk Kim grad student 2014 UCSD
Haythem Latif grad student 2014 UCSD
Joshua Adam Lerman grad student 2014 UCSD
Jonathan Monk grad student 2015 UCSD
Edward J. O'Brien grad student 2015 UCSD
Daniel Zielinski grad student 2015 UCSD
Ali Ebrahim grad student 2016 UCSD
Ryan LaCroix grad student 2016 UCSD
Nikolaus Sonnenschein post-doc 2011-2013 UCSD
Sang Woo Seo post-doc 2013-2015 UCSD

Collaborators

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Jason H. Yang collaborator 2015-2017 UCSD
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Publications

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Heckmann D, Campeau A, Lloyd CJ, et al. (2020) Kinetic profiling of metabolic specialists demonstrates stability and consistency of in vivo enzyme turnover numbers. Proceedings of the National Academy of Sciences of the United States of America
Phaneuf PV, Yurkovich JT, Heckmann D, et al. (2020) Causal mutations from adaptive laboratory evolution are outlined by multiple scales of genome annotations and condition-specificity. Bmc Genomics. 21: 514
Lieven C, Beber ME, Olivier BG, et al. (2020) Publisher Correction: MEMOTE for standardized genome-scale metabolic model testing. Nature Biotechnology. 38: 504
Salazar MJ, Machado H, Dillon NA, et al. (2020) Genetic Determinants Enabling Medium-Dependent Adaptation to Nafcillin in Methicillin-Resistant Staphylococcus aureus. Msystems. 5
Luo H, Yang L, Kim SH, et al. (2020) Directed Metabolic Pathway Evolution Enables Functional Pterin-Dependent Aromatic-Amino-Acid Hydroxylation in . Acs Synthetic Biology
Lieven C, Beber ME, Olivier BG, et al. (2020) MEMOTE for standardized genome-scale metabolic model testing. Nature Biotechnology
Rajput A, Poudel S, Tsunemoto H, et al. (2019) Profiling the effect of nafcillin on HA-MRSA D712 using bacteriological and physiological media. Scientific Data. 6: 322
Anand A, Chen K, Yang L, et al. (2019) Adaptive evolution reveals a tradeoff between growth rate and oxidative stress during naphthoquinone-based aerobic respiration. Proceedings of the National Academy of Sciences of the United States of America
Nogales J, Mueller J, Gudmundsson S, et al. (2019) High-quality genome-scale metabolic modeling of Pseudomonas putida highlights its broad metabolic capabilities. Environmental Microbiology
Anand A, Chen K, Catoiu E, et al. (2019) OxyR is a convergent target for mutations acquired during adaptation to oxidative stress-prone metabolic states. Molecular Biology and Evolution
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