Thomas Hamelryck

Affiliations: 
Bioinformatics Centre University of Copenhagen, København, Denmark 
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"Thomas Hamelryck"

Children

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Simon Olsson grad student 2010-2013 Copenhagen University (Evolution Tree)

Collaborators

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Douglas Lowell Theobald collaborator 2011- Copenhagen University (Evolution Tree)
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Publications

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Golden M, Garcia-Portugues E, Sørensen M, et al. (2017) A generative angular model of protein structure evolution. Molecular Biology and Evolution
Johansson KE, Johansen NT, Christensen S, et al. (2016) Computational redesign of thioredoxin is hypersensitive towards minor conformational changes in the backbone template. Journal of Molecular Biology
Antonov LD, Olsson S, Boomsma W, et al. (2015) Bayesian inference of protein ensembles from SAXS data. Physical Chemistry Chemical Physics : Pccp
Bratholm LA, Christensen AS, Hamelryck T, et al. (2015) Bayesian inference of protein structure from chemical shift data. Peerj. 3: e861
Olsson S, Vögeli BR, Cavalli A, et al. (2014) Probabilistic Determination of Native State Ensembles of Proteins. Journal of Chemical Theory and Computation. 10: 3484-91
Boomsma W, Tian P, Frellsen J, et al. (2014) Equilibrium simulations of proteins using molecular fragment replacement and NMR chemical shifts. Proceedings of the National Academy of Sciences of the United States of America. 111: 13852-7
Christensen AS, Hamelryck T, Jensen JH. (2014) FragBuilder: an efficient Python library to setup quantum chemistry calculations on peptides models. Peerj. 2: e277
Valentin JB, Andreetta C, Boomsma W, et al. (2014) Formulation of probabilistic models of protein structure in atomic detail using the reference ratio method. Proteins. 82: 288-99
Christensen AS, Linnet TE, Borg M, et al. (2013) Protein structure validation and refinement using amide proton chemical shifts derived from quantum mechanics. Plos One. 8: e84123
Olsson S, Frellsen J, Boomsma W, et al. (2013) Inference of structure ensembles of flexible biomolecules from sparse, averaged data. Plos One. 8: e79439
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