John Tyson, Ph.D.

Biology Virginia Polytechnic and State University, United States 
cell cycle modeling
"John Tyson"


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John C. Light grad student Chicago (Chemistry Tree)


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Christian I. Hong grad student VirginiaTech
Laurence Calzone grad student 2003 Virginia Tech
Jason W. Zwolak grad student 2004 Virginia Tech
Shenghua Li grad student 2008 Virginia Tech
Tongli Zhang grad student 2008 Virginia Tech
Yan Fu grad student 2012 Virginia Tech
Iman Tavassoly grad student 2009-2013 Virginia Tech
Attila Csikász-Nagy post-doc
Debashis Barik post-doc 2007-2010 Virginia Tech (Chemistry Tree)
Sandip Kar post-doc 2007-2010 Virginia Tech (Chemistry Tree)


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Béla Novák collaborator
Jianhua Xing collaborator (Chemistry Tree)
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Ahmadian M, Tyson JJ, Cao Y. (2019) A stochastic model of size control in the budding yeast cell cycle. Bmc Bioinformatics. 20: 322
Clarke R, Tyson JJ, Tan M, et al. (2019) Systems biology: perspectives on multiscale modeling in research on endocrine-related cancers. Endocrine-Related Cancer
Palmisano A, Hoops S, Watson LT, et al. (2019) Efficiently Encoding Complex Biochemical Models with the Multistate Model Builder (MSMB). Methods in Molecular Biology (Clifton, N.J.). 1945: 119-139
Chen C, Whitney IP, Banerjee A, et al. (2019) Ectopic Activation of the Spindle Assembly Checkpoint Signaling Cascade Reveals Its Biochemical Design. Current Biology : Cb. 29: 104-119.e10
Jones TC, Hoops S, Watson LT, et al. (2018) JigCell Model Connector: building large molecular network models from components. Simulation. 94: 993-1008
Battogtokh D, Tyson JJ. (2018) Deciphering the Dynamics of Interlocked Feedback Loops in a Model of the Mammalian Circadian Clock. Biophysical Journal. 115: 2055-2066
Heldt FS, Lunstone R, Tyson JJ, et al. (2018) Dilution and titration of cell-cycle regulators may control cell size in budding yeast. Plos Computational Biology. 14: e1006548
Weston BR, Li L, Tyson JJ. (2018) Mathematical Analysis of Cytokine-Induced Differentiation of Granulocyte-Monocyte Progenitor Cells. Frontiers in Immunology. 9: 2048
Novák B, Heldt FS, Tyson JJ. (2018) Genome Stability during Cell Proliferation: A Systems Analysis of the Molecular Mechanisms Controlling Progression through the Eukaryotic Cell Cycle. Current Opinion in Systems Biology. 9: 22-31
Battogtokh D, Kojima S, Tyson JJ. (2018) Modeling the interactions of sense and antisense Period transcripts in the mammalian circadian clock network. Plos Computational Biology. 14: e1005957
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