Federico Baldini
Affiliations: | 2015- | Luxembourg Centre for Systems Biomedicine | University of Luxembourg |
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"Federico Baldini"
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| Meydan Y, Baldini F, Korem T. (2023) pymgpipe: microbiome metabolic modeling in Python. Journal of Open Source Software. 8 |
| Solfisburg QS, Baldini F, Baldwin-Hunter BL, et al. (2023) The Salivary Microbiome and Predicted Metabolite Production are Associated with Progression from Barrett's Esophagus to Esophageal Adenocarcinoma. Biorxiv : the Preprint Server For Biology |
| Kindschuh WF, Baldini F, Liu MC, et al. (2023) Preterm birth is associated with xenobiotics and predicted by the vaginal metabolome. Nature Microbiology |
| Baldini F, Hertel J, Sandt E, et al. (2020) Parkinson's disease-associated alterations of the gut microbiome predict disease-relevant changes in metabolic functions. Bmc Biology. 18: 62 |
| Hertel J, Harms AC, Heinken A, et al. (2019) Integrated Analyses of Microbiome and Longitudinal Metabolome Data Reveal Microbial-Host Interactions on Sulfur Metabolism in Parkinson's Disease. Cell Reports. 29: 1767-1777.e8 |
| Heinken A, Ravcheev DA, Baldini F, et al. (2019) Systematic assessment of secondary bile acid metabolism in gut microbes reveals distinct metabolic capabilities in inflammatory bowel disease. Microbiome. 7: 75 |
| Baldini F, Heinken A, Heirendt L, et al. (2018) The Microbiome Modeling Toolbox: from microbial interactions to personalized microbial communities. Bioinformatics (Oxford, England) |
| Bauer E, Zimmermann J, Baldini F, et al. (2017) BacArena: Individual-based metabolic modeling of heterogeneous microbes in complex communities. Plos Computational Biology. 13: e1005544 |