Casey S. Greene, Ph.D.

2012-2015 Genetics Geisel School of Medicine at Dartmouth, Hanover, NH, United States 
 2015-2020 Pharmacology University of Pennsylvania Perelman School of Medicine 
 2020- Biomedical Informatics University of Colorado Anschutz Medical Campus, Denver, Aurora, CO 
"Casey Greene"


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Jason H. Moore grad student 2009 Dartmouth
 (Relief-based bioinformatics methods for the analysis of epistasis in genetic association studies.)
Olga G. Troyanskaya post-doc (Cell Biology Tree)
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Zietz M, Himmelstein DS, Kloster K, et al. (2024) The probability of edge existence due to node degree: a baseline for network-based predictions. Gigascience. 13
Crawford J, Chikina M, Greene CS. (2024) Optimizer's dilemma: optimization strongly influences model selection in transcriptomic prediction. Bioinformatics Advances. 4: vbae004
Davidson NR, Barnard ME, Hippen AA, et al. (2023) Molecular subtypes of high grade serous ovarian cancer across racial groups and gene expression platforms. Biorxiv : the Preprint Server For Biology
Pividori M, Lu S, Li B, et al. (2023) Projecting genetic associations through gene expression patterns highlights disease etiology and drug mechanisms. Nature Communications. 14: 5562
Zhang S, Heil BJ, Mao W, et al. (2023) MousiPLIER: A Mouse Pathway-Level Information Extractor Model. Biorxiv : the Preprint Server For Biology
Himmelstein DS, Zietz M, Rubinetti V, et al. (2023) Hetnet connectivity search provides rapid insights into how biomedical entities are related. Gigascience. 12
Shapiro JA, Gaonkar KS, Spielman SJ, et al. (2023) OpenPBTA: The Open Pediatric Brain Tumor Atlas. Cell Genomics. 3: 100340
Banerjee J, Taroni JN, Allaway RJ, et al. (2023) Machine learning in rare disease. Nature Methods
Dang MT, Gonzalez MV, Gaonkar KS, et al. (2023) Macrophages in SHH subgroup medulloblastoma display dynamic heterogeneity that varies with treatment modality. Cell Reports. 42: 112600
Foltz SM, Greene CS, Taroni JN. (2023) Cross-platform normalization enables machine learning model training on microarray and RNA-seq data simultaneously. Communications Biology. 6: 222
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