Xinshu Grace Xiao, Ph.D
Affiliations: | 2009- | Bioinformatics | University of California, Los Angeles, Los Angeles, CA |
Area:
RNA, Computational Biology, BioinformaticsWebsite:
https://www.ibp.ucla.edu/research/xiao/Home.htmlGoogle:
"Xinshu Xiao"
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Publications
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| Yamamoto R, Liu Z, Choudhury M, et al. (2023) dsRID: in silico identification of dsRNA regions using long-read RNA-seq data. Bioinformatics (Oxford, England) |
| Liu Z, Quinones-Valdez G, Fu T, et al. (2023) L-GIREMI uncovers RNA editing sites in long-read RNA-seq. Genome Biology. 24: 171 |
| Yamamoto R, Liu Z, Choudhury M, et al. (2023) dsRID: Editing-free in silico identification of dsRNA region using long-read RNA-seq data. Biorxiv : the Preprint Server For Biology |
| Choudhury M, Fu T, Amoah K, et al. (2023) Widespread RNA hypoediting in schizophrenia and its relevance to mitochondrial function. Science Advances. 9: eade9997 |
| Zheng R, Dunlap M, Lyu J, et al. (2023) LINE-associated cryptic splicing induces dsRNA-mediated interferon response and tumor immunity. Biorxiv : the Preprint Server For Biology |
| Chan TW, Dodson JP, Arbet J, et al. (2022) Single-cell analysis in lung adenocarcinoma implicates RNA editing in cancer innate immunity and patient prognosis. Cancer Research |
| Quinones-Valdez G, Fu T, Chan TW, et al. (2022) scAllele: A versatile tool for the detection and analysis of variants in scRNA-seq. Science Advances. 8: eabn6398 |
| Fu T, Chan TW, Bahn JH, et al. (2022) Multifaceted role of RNA editing in promoting loss-of-function of PODXL in cancer. Iscience. 25: 104836 |
| He J, Fu T, Zhang L, et al. (2022) Improved Zebra Finch Brain Transcriptome identifies novel proteins with sex differences. Gene. 146803 |
| Wang H, Chan TW, Vashisht AA, et al. (2021) Lipin 1 modulates mRNA splicing during fasting adaptation in liver. Jci Insight. 6 |