Bo Li

Affiliations: 
2013- University of California, Berkeley, Berkeley, CA 
Area:
Bioinformatics, RNA, Sequencing
Website:
http://bli25ucb.github.io/
Google:
"Bo Li"

Parents

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Colin N. Dewey grad student 2008-2013 UW Madison (Evolution Tree)
Lior Pachter post-doc 2013- UC Berkeley (Evolution Tree)
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Publications

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Li B, Fu C, Zhou J, et al. (2022) Highly Efficient Genome Editing Using Geminivirus-Based CRISPR/Cas9 System in Cotton Plant. Cells. 11
Guo Z, Li B, Du J, et al. (2022) LettuceGDB: the community database for lettuce genetics and omics. Plant Communications. 100425
Wang L, Li B, Jiang J, et al. (2022) The complete mitochondrial genomes of (Ephemeroptera: Ephemeridae) and phylogenetic analysis. Mitochondrial Dna. Part B, Resources. 7: 461-463
Lozano R, Booth GT, Omar BY, et al. (2021) RNA polymerase mapping in plants identifies intergenic regulatory elements enriched in causal variants. G3 (Bethesda, Md.)
Li B, Gould J, Yang Y, et al. (2020) Cumulus provides cloud-based data analysis for large-scale single-cell and single-nucleus RNA-seq. Nature Methods
Slyper M, Porter CBM, Ashenberg O, et al. (2020) Author Correction: A single-cell and single-nucleus RNA-Seq toolbox for fresh and frozen human tumors. Nature Medicine
Slyper M, Porter CBM, Ashenberg O, et al. (2020) A single-cell and single-nucleus RNA-Seq toolbox for fresh and frozen human tumors. Nature Medicine. 26: 792-802
Lavaert M, Liang KL, Vandamme N, et al. (2020) Integrated scRNA-Seq Identifies Human Postnatal Thymus Seeding Progenitors and Regulatory Dynamics of Differentiating Immature Thymocytes. Immunity
Haas BJ, Dobin A, Li B, et al. (2019) Accuracy assessment of fusion transcript detection via read-mapping and de novo fusion transcript assembly-based methods. Genome Biology. 20: 213
Gaublomme JT, Li B, McCabe C, et al. (2019) Nuclei multiplexing with barcoded antibodies for single-nucleus genomics. Nature Communications. 10: 2907
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