Luis Pedro Coelho

European Molecular Biology Laborator (EMBL), Heidelberg, Baden-Württemberg, Germany 
Computational Biology
"Luis Pedro Coelho"


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Peer Bork post-doc 2013-2018
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Dmitrijeva M, Tackmann J, Matias Rodrigues JF, et al. (2024) A global survey of prokaryotic genomes reveals the eco-evolutionary pressures driving horizontal gene transfer. Nature Ecology & Evolution
Rodríguez Del Río Á, Giner-Lamia J, Cantalapiedra CP, et al. (2023) Functional and evolutionary significance of unknown genes from uncultivated taxa. Nature
Andrikopoulos P, Aron-Wisnewsky J, Chakaroun R, et al. (2023) Evidence of a causal and modifiable relationship between kidney function and circulating trimethylamine N-oxide. Nature Communications. 14: 5843
Bengtsson-Palme J, Abramova A, Berendonk TU, et al. (2023) Towards monitoring of antimicrobial resistance in the environment: For what reasons, how to implement it, and what are the data needs? Environment International. 178: 108089
Lai S, Pan S, Sun C, et al. (2022) metaMIC: reference-free misassembly identification and correction of de novo metagenomic assemblies. Genome Biology. 23: 242
Chong H, Zha Y, Yu Q, et al. (2022) EXPERT: transfer learning-enabled context-aware microbial community classification. Briefings in Bioinformatics
Schmidt TSB, Li SS, Maistrenko OM, et al. (2022) Drivers and determinants of strain dynamics following fecal microbiota transplantation. Nature Medicine. 28: 1902-1912
Pan S, Zhu C, Zhao XM, et al. (2022) A deep siamese neural network improves metagenome-assembled genomes in microbiome datasets across different environments. Nature Communications. 13: 2326
Khedkar S, Smyshlyaev G, Letunic I, et al. (2022) Landscape of mobile genetic elements and their antibiotic resistance cargo in prokaryotic genomes. Nucleic Acids Research
Fromentin S, Forslund SK, Chechi K, et al. (2022) Microbiome and metabolome features of the cardiometabolic disease spectrum. Nature Medicine
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