Jakub Truszkowski

Affiliations: 
European Bioinformatics Institute and CRUK CI 
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"Jakub Truszkowski"
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Publications

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Truszkowski J, Goldman N. (2015) Maximum likelihood phylogenetic inference is consistent on multiple sequence alignments, with or without gaps. Systematic Biology
Brown DG, Truszkowski J. (2013) LSHPlace: fast phylogenetic placement using locality-sensitive hashing. Pacific Symposium On Biocomputing. Pacific Symposium On Biocomputing. 310-319
Brown DG, Truszkowski J. (2013) Fast error-tolerant quartet phylogeny algorithms Theoretical Computer Science. 483: 104-114
Masella AP, Bartram AK, Truszkowski JM, et al. (2012) PANDAseq: paired-end assembler for illumina sequences. Bmc Bioinformatics. 13: 31
Truszkowski J, Hao Y, Brown DG. (2012) Towards a practical O(nlogn) phylogeny algorithm Algorithms For Molecular Biology. 7
Brown DG, Truszkowski J. (2012) Fast phylogenetic tree reconstruction using locality-sensitive hashing Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 7534: 14-29
Truszkowski J, Brown DG. (2011) More accurate recombination prediction in HIV-1 using a robust decoding algorithm for HMMs Bmc Bioinformatics. 12
Brown DG, Truszkowski J. (2011) Towards a practical O(n log n) phylogeny algorithm Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 6833: 14-25
Brown DG, Truszkowski J. (2010) New decoding algorithms for hidden markov models using distance measures on labellings Bmc Bioinformatics. 11
Omar F, Sinn M, Truszkowski J, et al. (2010) Comparative analysis of probabilistic models for activity recognition with an instrumented walker Proceedings of the 26th Conference On Uncertainty in Artificial Intelligence, Uai 2010. 392-400
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