Michael Baym, PhD
Affiliations: | 2003-2009 | Mathematics | Massachusetts Institute of Technology, Cambridge, MA, United States |
| 2009-2017 | Systems Biology | Harvard Medical School, Boston, MA, United States | |
| 2017- | Biomedical Informatics | Harvard Medical School, Boston, MA, United States |
Area:
Antibiotic resistance, evolution, algorithmsWebsite:
baymlab.hms.harvard.eduGoogle:
"Michael Baym"
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Publications
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| Russ D, Glaser F, Shaer Tamar E, et al. (2020) Escape mutations circumvent a tradeoff between resistance to a beta-lactam and resistance to a beta-lactamase inhibitor. Nature Communications. 11: 2029 |
| Břinda K, Callendrello A, Ma KC, et al. (2020) Rapid inference of antibiotic resistance and susceptibility by genomic neighbour typing. Nature Microbiology |
| Canals R, Chaudhuri RR, Steiner RE, et al. (2019) The fitness landscape of the African Salmonella Typhimurium ST313 strain D23580 reveals unique properties of the pBT1 plasmid. Plos Pathogens. 15: e1007948 |
| Anzai IA, Shaket L, Adesina O, et al. (2017) Rapid curation of gene disruption collections using Knockout Sudoku. Nature Protocols. 12: 2110-2137 |
| Baym M, Shaket L, Anzai IA, et al. (2016) Rapid construction of a whole-genome transposon insertion collection for Shewanella oneidensis by Knockout Sudoku. Nature Communications. 7: 13270 |
| Stone LK, Baym M, Lieberman TD, et al. (2016) Compounds that select against the tetracycline-resistance efflux pump. Nature Chemical Biology |
| Baym M, Lieberman TD, Kelsic ED, et al. (2016) Spatiotemporal microbial evolution on antibiotic landscapes. Science (New York, N.Y.). 353: 1147-51 |
| Baym M, Stone LK, Kishony R. (2016) Multidrug evolutionary strategies to reverse antibiotic resistance. Science (New York, N.Y.). 351: aad3292 |
| Palmer AC, Toprak E, Baym M, et al. (2015) Delayed commitment to evolutionary fate in antibiotic resistance fitness landscapes. Nature Communications. 6: 7385 |
| Baym M, Kryazhimskiy S, Lieberman TD, et al. (2015) Inexpensive multiplexed library preparation for megabase-sized genomes. Plos One. 10: e0128036 |