Ramya Raviram, PhD
Affiliations: | 2017-2020 | Ludwig Institute for Cancer Research, San Diego |
Area:
GenomicsGoogle:
"Ramya Raviram"Parents
Sign in to add mentor| Richard A. Bonneau | grad student | 2011-2017 | NYU Langone Medical Center |
| Jane A. Skok | grad student | 2011-2017 | NYU Langone Medical Center |
| Bing Ren | post-doc | 2017-2020 | Ludwig Institute for Cancer Research, San Diego (Chemistry Tree) |
Collaborators
Sign in to add collaborator| Pedro Rocha | collaborator | 2011-2017 | NYU Langone Medical Center |
BETA: Related publications
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Publications
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| Raviram R, Raman A, Preissl S, et al. (2023) Integrated analysis of single-cell chromatin state and transcriptome identified common vulnerability despite glioblastoma heterogeneity. Proceedings of the National Academy of Sciences of the United States of America. 120: e2210991120 |
| Raviram R, Raman A, Preissl S, et al. (2020) EPCO-19. INTEGRATED ANALYSIS OF INTRA-TUMORAL HETEROGENEITY IN GLIOBLASTOMAS THROUGH SINGLE NUCLEI ATAC-SEQ AND RNA-SEQ Neuro-Oncology. 22: ii73-ii73 |
| Wu S, Turner KM, Nguyen N, et al. (2019) Circular ecDNA promotes accessible chromatin and high oncogene expression. Nature |
| Belver L, Yang AY, Albero R, et al. (2019) Gata3-controlled nucleosome eviction drives Myc enhancer activity in T-cell development and leukemia. Cancer Discovery |
| Chowdhry S, Zanca C, Rajkumar U, et al. (2019) NAD metabolic dependency in cancer is shaped by gene amplification and enhancer remodelling. Nature |
| Juric I, Yu M, Abnousi A, et al. (2019) MAPS: Model-based analysis of long-range chromatin interactions from PLAC-seq and HiChIP experiments. Plos Computational Biology. 15: e1006982 |
| Patel L, Kang R, Rosenberg SC, et al. (2019) Dynamic reorganization of the genome shapes the recombination landscape in meiotic prophase. Nature Structural & Molecular Biology |
| Raviram R, Rocha PP, Luo VM, et al. (2018) Analysis of 3D genomic interactions identifies candidate host genes that transposable elements potentially regulate. Genome Biology. 19: 216 |
| Issuree PD, Day K, Au C, et al. (2018) Stage-specific epigenetic regulation of CD4 expression by coordinated enhancer elements during T cell development. Nature Communications. 9: 3594 |
| Oksuz O, Narendra V, Lee CH, et al. (2018) Capturing the Onset of PRC2-Mediated Repressive Domain Formation. Molecular Cell. 70: 1149-1162.e5 |