Mark Agostino

Affiliations: 
2013-2015 Barcelona Supercomputing Center, Barcelona, Catalunya, Spain 
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"Mark Agostino"
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Agostino M. (2020) Comprehensive analysis of carbohydrate-protein recognition in the Protein Data Bank. Carbohydrate Research. 498: 108180
Agostino M, Öther-Gee Pohl S, Dharmarajan A. (2017) Structure-based prediction of Wnt binding affinities for Frizzled-type cysteine-rich domain. The Journal of Biological Chemistry
Agostino M, Mancera RL, Ramsland PA, et al. (2016) Optimization of protein-protein docking for predicting Fc-protein interactions. Journal of Molecular Recognition : Jmr
Dingjan T, Agostino M, Ramsland PA, et al. (2016) Antibody-Carbohydrate Recognition from Docked Ensembles Using the AutoMap Procedure. Methods in Molecular Biology (Clifton, N.J.). 1331: 41-55
Agostino M, Velkov T, Dingjan T, et al. (2015) The carbohydrate-binding promiscuity of Euonymus europaeus lectin is predicted to involve a single binding site. Glycobiology. 25: 101-14
Agostino M, Gandhi NS, Mancera RL. (2014) Development and application of site mapping methods for the design of glycosaminoglycans. Glycobiology. 24: 840-51
Hutchinson AT, Malik A, Berkahn MB, et al. (2013) Formation of assemblies on cell membranes by secreted proteins: molecular studies of free λ light chain aggregates found on the surface of myeloma cells. The Biochemical Journal. 454: 479-89
Agostino M, Mancera RL, Ramsland PA, et al. (2013) AutoMap: a tool for analyzing protein-ligand recognition using multiple ligand binding modes. Journal of Molecular Graphics & Modelling. 40: 80-90
Agostino M, Yuriev E, Ramsland PA. (2012) Antibody recognition of cancer-related gangliosides and their mimics investigated using in silico site mapping. Plos One. 7: e35457
Agostino M, Yuriev E, Ramsland PA. (2011) A computational approach for exploring carbohydrate recognition by lectins in innate immunity. Frontiers in Immunology. 2: 23
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