Toni Gabaldon

Affiliations: 
Centre for Genomic Regulation (CRG), Spain 
Area:
Computational Biology, Evolutionary Biology, Genomics, Microbiology, Phylogenetics
Website:
http://big.crg.cat/people/toni_gabaldon
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Biography

1997-2001 Junior researcher at the Molecular Biology and Biochemistry department at the Universitat de València (www.uv.es)

2001-2005 PhD in Bioinformatics, at CMBI (www.cmbi.ru.nl) and NCMLS (www.ncmls.ru.nl) centres at Nijmegen University (The Netherlands) (www.ru.nl)

2005-2007 EMBO (www.embo.org) Postdoctoral fellow at the Bioinformatics Department at CIPF (Valencia). (http://bioinfo.cipf.es)

2007-2008 FIS contracted researcher at the Bioinformatics Department at CIPF (Valencia). (http://bioinfo.cipf.es)

Since Sept 2008 Junior Group Leader in the Bioinformatics and Genomics Programme, at the CRG (Barcelona) (www.crg.es)

Parents

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Martijn A. Huynen grad student 2001-2005 University of Nijmegen
 (First PhD student)
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Publications

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Marcet-Houben M, Cruz F, Gómez-Garrido J, et al. (2024) Genomics of the expanding pine pathogen reveals patterns of ongoing genetic admixture. Msystems. e0092823
Schiavinato M, Del Olmo V, Muya VN, et al. (2023) JLOH: Inferring loss of heterozygosity blocks from sequencing data. Computational and Structural Biotechnology Journal. 21: 5738-5750
Mixão V, Nunez-Rodriguez JC, Del Olmo V, et al. (2023) Evolution of loss of heterozygosity patterns in hybrid genomes of Candida yeast pathogens. Bmc Biology. 21: 105
Julca I, Vargas P, Gabaldón T. (2023) Phylogenomics of the Olea europaea complex using 15 whole genomes supports recurrent genetic admixture together with differentiation into seven subspecies. Bmc Biology. 21: 85
Marlétaz F, de la Calle-Mustienes E, Acemel RD, et al. (2023) The little skate genome and the evolutionary emergence of wing-like fins. Nature
Marcet-Houben M, Collado-Cala I, Fuentes-Palacios D, et al. (2023) EvolClustDB: Exploring Eukaryotic Gene Clusters with Evolutionarily Conserved Genomic Neighbourhoods. Journal of Molecular Biology. 168013
Gabaldón T, Hittinger CT. (2022) Editorial: Genomic insights on fungal hybrids. Frontiers in Fungal Biology. 3: 1063609
Marcet-Houben M, Alvarado M, Ksiezopolska E, et al. (2022) Chromosome-level assemblies from diverse clades reveal limited structural and gene content variation in the genome of Candida glabrata. Bmc Biology. 20: 226
Naranjo-Ortiz MA, Molina M, Fuentes D, et al. (2022) Karyon: a computational framework for the diagnosis of hybrids, aneuploids, and other nonstandard architectures in genome assemblies. Gigascience. 11
Foley S, Vlasova A, Marcet-Houben M, et al. (2022) Evolutionary analyses of genes in Echinodermata offer insights towards the origin of metazoan phyla. Genomics. 114: 110431
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