Shuyi Ma - Publications

Affiliations: 
2009-2014 Chemical  University of Illinois, Urbana-Champaign, Urbana-Champaign, IL 

18 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Peters JS, Ismail N, Dippenaar A, Ma S, Sherman DR, Warren RM, Kana BD. Genetic Diversity in Clinical Isolates and Resulting Outcomes of Tuberculosis Infection and Disease. Annual Review of Genetics. PMID 32926793 DOI: 10.1146/Annurev-Genet-022820-085940  0.318
2020 Wang Y, Ma S, Ruzzo WL. Spatial modeling of prostate cancer metabolic gene expression reveals extensive heterogeneity and selective vulnerabilities. Scientific Reports. 10: 3490. PMID 32103057 DOI: 10.1038/S41598-020-60384-W  0.44
2019 Ma S, Jaipalli S, Larkins-Ford J, Lohmiller J, Aldridge BB, Sherman DR, Chandrasekaran S. Transcriptomic Signatures Predict Regulators of Drug Synergy and Clinical Regimen Efficacy against Tuberculosis. Mbio. 10. PMID 31719182 DOI: 10.1128/Mbio.02627-19  0.512
2017 Wang Z, Danziger SA, Heavner BD, Ma S, Smith JJ, Li S, Herricks T, Simeonidis E, Baliga NS, Aitchison JD, Price ND. Combining inferred regulatory and reconstructed metabolic networks enhances phenotype prediction in yeast. Plos Computational Biology. 13: e1005489. PMID 28520713 DOI: 10.1371/Journal.Pcbi.1005489  0.523
2016 Peterson EJ, Ma S, Sherman DR, Baliga NS. Network analysis identifies Rv0324 and Rv0880 as regulators of bedaquiline tolerance in Mycobacterium tuberculosis. Nature Microbiology. 1: 16078. PMID 27573104 DOI: 10.1038/Nmicrobiol.2016.78  0.325
2016 Hong SI, Kwon SH, Hwang JY, Ma SX, Seo JY, Ko YH, Kim HC, Lee SY, Jang CG. Quinpirole Increases Melatonin-Augmented Pentobarbital Sleep via Cortical ERK, p38 MAPK, and PKC in Mice. Biomolecules & Therapeutics. 24: 115-122. PMID 26902082 DOI: 10.4062/biomolther.2015.097  0.352
2016 Hong SI, Kim MJ, You IJ, Kwon SH, Ma SX, Hwang JY, Seo JY, Ko YH, Lee BR, Lee SY, Jang CG. Phentermine induces conditioned rewarding effects via activation of the PI3K/Akt signaling pathway in the nucleus accumbens. Psychopharmacology. PMID 26887589 DOI: 10.1007/s00213-016-4231-z  0.381
2015 Ma S, Minch KJ, Rustad TR, Hobbs S, Zhou SL, Sherman DR, Price ND. Integrated Modeling of Gene Regulatory and Metabolic Networks in Mycobacterium tuberculosis. Plos Computational Biology. 11: e1004543. PMID 26618656 DOI: 10.1371/Journal.Pcbi.1004543  0.564
2015 Hwang JY, Kim JS, Oh JH, Hong SI, Ma SX, Jung YH, Ko YH, Lee SY, Kim HC, Jang CG. The new stimulant designer compound pentedrone exhibits rewarding properties and affects dopaminergic activity. Addiction Biology. PMID 26290055 DOI: 10.1111/adb.12299  0.388
2015 Turkarslan S, Peterson EJ, Rustad TR, Minch KJ, Reiss DJ, Morrison R, Ma S, Price ND, Sherman DR, Baliga NS. A comprehensive map of genome-wide gene regulation in Mycobacterium tuberculosis. Scientific Data. 2: 150010. PMID 25977815 DOI: 10.1038/Sdata.2015.10  0.531
2015 Minch KJ, Rustad TR, Peterson EJ, Winkler J, Reiss DJ, Ma S, Hickey M, Brabant W, Morrison B, Turkarslan S, Mawhinney C, Galagan JE, Price ND, Baliga NS, Sherman DR. The DNA-binding network of Mycobacterium tuberculosis. Nature Communications. 6: 5829. PMID 25581030 DOI: 10.1038/Ncomms6829  0.497
2014 Rustad TR, Minch KJ, Ma S, Winkler JK, Hobbs S, Hickey M, Brabant W, Turkarslan S, Price ND, Baliga NS, Sherman DR. Mapping and manipulating the Mycobacterium tuberculosis transcriptome using a transcription factor overexpression-derived regulatory network. Genome Biology. 15: 502. PMID 25380655 DOI: 10.1186/S13059-014-0502-3  0.53
2014 Ma S, Sung J, Magis AT, Wang Y, Geman D, Price ND. Measuring the effect of inter-study variability on estimating prediction error. Plos One. 9: e110840. PMID 25330348 DOI: 10.1371/Journal.Pone.0110840  0.717
2014 Ma S, Sung J, Magis AT, Wang Y, Geman D, Price ND. Measuring the effect of inter-study variability on estimating prediction error Plos One. 9. DOI: 10.1371/journal.pone.0110840  0.716
2013 Sung J, Kim PJ, Ma S, Funk CC, Magis AT, Wang Y, Hood L, Geman D, Price ND. Multi-study integration of brain cancer transcriptomes reveals organ-level molecular signatures. Plos Computational Biology. 9: e1003148. PMID 23935471 DOI: 10.1371/Journal.Pcbi.1003148  0.706
2011 Li Q, Singh CR, Ma S, Price ND, Jagannath C. Label-free proteomics and systems biology analysis of mycobacterial phagosomes in dendritic cells and macrophages. Journal of Proteome Research. 10: 2425-39. PMID 21413810 DOI: 10.1021/Pr101245U  0.482
2010 Ma S, Funk CC, Price ND. Systems approaches to molecular cancer diagnostics. Discovery Medicine. 10: 531-42. PMID 21189224  0.486
2010 Ma S, Sung J, Wang Y, Price ND. Lung disease diagnosis from gene expression profiles Aiche Annual Meeting, Conference Proceedings 0.552
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