Dov Greenbaum, Ph.D. - Publications

Yale University, New Haven, CT 
Computational Biology and Bioinformatics

57 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any innacuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2017 Greenbaum D, Rozowsky J, Stodden V, Gerstein M. Structuring supplemental materials in support of reproducibility. Genome Biology. 18: 64. PMID 28381262 DOI: 10.1186/s13059-017-1205-3  0.8
2015 Greenbaum D. Exoskeleton progress yields slippery slope. Science (New York, N.Y.). 350: 1176. PMID 26785467 DOI: 10.1126/science.350.6265.1176-a  0.8
2015 Hornstein D, Nakar S, Weinberger S, Greenbaum D. More Nuanced Informed Consent Is Not Necessarily Better Informed Consent. The American Journal of Bioethics : Ajob. 15: 51-3. PMID 26305755 DOI: 10.1080/15265161.2015.1062167  0.8
2015 Weinberger S, Greenbaum D. Genetic technology to prevent disabilities: how popular culture informs our understanding of the use of genetics to define and prevent undesirable traits. The American Journal of Bioethics : Ajob. 15: 32-4. PMID 26030494 DOI: 10.1080/15265161.2015.1028665  0.8
2015 Greenbaum D. Expanding ELSI to all areas of innovative science and technology. Nature Biotechnology. 33: 425-6. PMID 25850063 DOI: 10.1038/nbt.3193  0.8
2015 Greenbaum D. Cyber crime 2.0 Science. 348: 193. DOI: 10.1126/science.aaa7298  0.8
2015 Nakar S, Weinberger S, Greenbaum D. Legal and Social Implications of Predictive Brain Machine Interfaces: Duty of Care, Negligence, and Criminal Responsibility Ajob Neuroscience. 6: 40-42. DOI: 10.1080/21507740.2015.1094558  0.8
2014 Greenbaum D, Nakar S. Editorial: genomics and criminal law. Recent Advances in Dna & Gene Sequences. 8: 57-8. PMID 25860437  0.8
2014 Greenbaum D. If you don't know where you are going, you might wind up someplace else: incidental findings in recreational personal genomics. The American Journal of Bioethics : Ajob. 14: 12-4. PMID 24592830 DOI: 10.1080/15265161.2013.879946  0.8
2014 Greenbaum D. The importance of authentic science on screen Science. 344: 980. DOI: 10.1126/science.1255500  0.8
2014 Greenbaum D, Harmanci A, Gerstein M. Proposed social and technological solutions to issues of data privacy in personal genomics 2014 Ieee International Symposium On Ethics in Science, Technology and Engineering, Ethics 2014. DOI: 10.1109/ETHICS.2014.6893418  0.8
2013 Greenbaum D. If you can't walk the walk, do you have to talk the talk: ethical considerations for the emerging field of sports genomics. The American Journal of Bioethics : Ajob. 13: 19-21. PMID 24024800 DOI: 10.1080/15265161.2013.828121  0.8
2013 Greenbaum D. Grand challenge: ELSI in a changing global environment. Frontiers in Genetics. 4: 158. PMID 23990842 DOI: 10.3389/fgene.2013.00158  0.8
2013 Greenbaum D. Genomic data disclosure: time to reassess the realities. The American Journal of Bioethics : Ajob. 13: 47-50. PMID 23557049 DOI: 10.1080/15265161.2013.776134  0.8
2013 Greenbaum D, Chen J, Gerstein M. Deep inside champions, just genes? Science. 342: 560-561. DOI: 10.1126/science.1245795  0.8
2013 Gerstein M, Greenbaum D. Proceed with caution Scientist. 27.  0.8
2012 Greenbaum D. Editorial: Genetics And Athletics. Recent Patents On Dna & Gene Sequences. 6: 173-4. PMID 23106248  0.8
2012 Greenbaum D. Introducing personal genomics to college athletes: potentials and pitfalls. The American Journal of Bioethics : Ajob. 12: 45-7. PMID 22452478 DOI: 10.1080/15265161.2012.656811  0.8
2012 Greenbaum D. Patents and drug shortages: will the new congressional efforts save us from impending drug shortages? The American Journal of Bioethics : Ajob. 12: 18-20. PMID 22220953 DOI: 10.1080/15265161.2011.635835  0.8
2011 Greenbaum D, Sboner A, Mu XJ, Gerstein M. Genomics and privacy: implications of the new reality of closed data for the field. Plos Computational Biology. 7: e1002278. PMID 22144881 DOI: 10.1371/journal.pcbi.1002278  0.8
2011 Greenbaum D, Gerstein M. The role of cloud computing in managing the deluge of potentially private genetic data. The American Journal of Bioethics : Ajob. 11: 39-41. PMID 22047125 DOI: 10.1080/15265161.2011.608242  0.8
2011 Sboner A, Mu XJ, Greenbaum D, Auerbach RK, Gerstein MB. The real cost of sequencing: higher than you think! Genome Biology. 12: 125. PMID 21867570 DOI: 10.1186/gb-2011-12-8-125  0.8
2011 Greenbaum D. An analysis of federal circuit discrimination: the evolution of the written description requirement vis-a-vis DNA and biotechnological inventions concerns for synthetic biology. Recent Patents On Dna & Gene Sequences. 5: 153-65. PMID 21787273 DOI: 10.2174/187221511797636284  0.8
2011 Greenbaum D. Patentable subject matter: morally neutral and context free. Recent Patents On Dna & Gene Sequences. 5: 72-80. PMID 21592085 DOI: 10.2174/187221511796392042  0.8
2011 Greenbaum D, Gerstein M. Social considerations in research: consider them but don't use them. The American Journal of Bioethics : Ajob. 11: 31-2. PMID 21534147 DOI: 10.1080/15265161.2011.562598  0.8
2011 Greenbaum D, Gerstein M. The benefits of snooping Technology Review. 114: 6.  0.8
2010 Greenbaum D, Scott C. Hochschullehrerprivileg-a modern incarnation of the professor's privilege to promote university to industry technology transfer Science, Technology and Society. 15: 55-76. DOI: 10.1177/097172180901500103  0.8
2010 Greenbaum D. State neutrality and patentable subject matter: Developing controversial biotechnology Ajob Neuroscience. 1: 59-61. DOI: 10.1080/21507741003699363  0.8
2010 Greenbaum D, Gerstein M. Regulating the genome Forbes. 185: 8.  0.8
2009 Greenbaum D, Gerstein M. Social networking and personal genomics: suggestions for optimizing the interaction. The American Journal of Bioethics : Ajob. 9: 15-9. PMID 19998104 DOI: 10.1080/15265160902894039  0.8
2009 Brown T, Murphy ER, Gerstein M, Greenbaum D. When scientific data become legal evidence Science. 324: 335-336. DOI: 10.1126/science.324.5925.335  0.8
2009 Greenbaum D, Gerstein M. Can't run from DNA New Scientist. 203: 28-29. DOI: 10.1016/S0262-4079(09)62555-0  0.8
2009 Greenbaum D. Determining optimal levels of intellectual property protection in developing nations: Is less really more? is more really less? Current Science. 97: 1604-1620.  0.8
2008 Greenbaum D, Du J, Gerstein M. Genomic anonymity: have we already lost it? The American Journal of Bioethics : Ajob. 8: 71-4. PMID 19003717 DOI: 10.1080/15265160802478560  0.8
2007 Greenbaum D. An analysis of the evolution of the written description requirement vis-à-vis DNA and biotechnological inventions. Recent Patents On Dna & Gene Sequences. 1: 138-44. PMID 19075928  0.8
2007 Gerstein M, Greenbaum D, Cheung K, Miller PL. An interdepartmental Ph.D. program in computational biology and bioinformatics: the Yale perspective. Journal of Biomedical Informatics. 40: 73-9. PMID 16650809 DOI: 10.1016/j.jbi.2006.02.008  0.8
2007 Greenbaum D, Gerstein M. Semantic web standards: Legal and social issues and implications Semantic Web: Revolutionizing Knowledge Discovery in the Life Sciences. 413-433. DOI: 10.1007/978-0-387-48438-9_19  0.8
2005 Smith A, Greenbaum D, Douglas SM, Long M, Gerstein M. Network security and data integrity in academia: an assessment and a proposal for large-scale archiving. Genome Biology. 6: 119. PMID 16168090 DOI: 10.1186/gb-2005-6-9-119  0.8
2005 Greenbaum D, Smith A, Gerstein M. Impediments to database interoperation: legal issues and security concerns. Nucleic Acids Research. 33: D3-4. PMID 15608202 DOI: 10.1093/nar/gki134  0.8
2004 Edwards AM, Kus B, Jansen R, Greenbaum D, Greenblatt J, Gerstein M. Bridging structural biology and genomics: assessing protein interaction data with known complexes. Drug Discovery Today. 9: S32-40. PMID 23573642  0.8
2004 Xia Y, Yu H, Jansen R, Seringhaus M, Baxter S, Greenbaum D, Zhao H, Gerstein M. Analyzing cellular biochemistry in terms of molecular networks. Annual Review of Biochemistry. 73: 1051-87. PMID 15189167 DOI: 10.1146/annurev.biochem.73.011303.073950  0.8
2004 Greenbaum D, Douglas SM, Smith A, Lim J, Fischer M, Schultz M, Gerstein M. Computer security in academia-a potential roadblock to distributed annotation of the human genome. Nature Biotechnology. 22: 771-2. PMID 15175700 DOI: 10.1038/nbt0604-771  0.8
2004 Yu H, Greenbaum D, Xin Lu H, Zhu X, Gerstein M. Genomic analysis of essentiality within protein networks. Trends in Genetics : Tig. 20: 227-31. PMID 15145574 DOI: 10.1016/j.tig.2004.04.008  0.8
2004 Yu H, Zhu X, Greenbaum D, Karro J, Gerstein M. TopNet: a tool for comparing biological sub-networks, correlating protein properties with topological statistics. Nucleic Acids Research. 32: 328-37. PMID 14724320 DOI: 10.1093/nar/gkh164  0.8
2003 Jansen R, Yu H, Greenbaum D, Kluger Y, Krogan NJ, Chung S, Emili A, Snyder M, Greenblatt JF, Gerstein M. A Bayesian networks approach for predicting protein-protein interactions from genomic data. Science (New York, N.Y.). 302: 449-53. PMID 14564010 DOI: 10.1126/science.1087361  0.8
2003 Greenbaum D, Colangelo C, Williams K, Gerstein M. Comparing protein abundance and mRNA expression levels on a genomic scale. Genome Biology. 4: 117. PMID 12952525 DOI: 10.1186/gb-2003-4-9-117  0.8
2003 Greenbaum D, Gerstein M. A universal legal framework as a prerequisite for database interoperability. Nature Biotechnology. 21: 979-82. PMID 12949555 DOI: 10.1038/nbt0903-979  0.8
2003 Greenbaum D, Lim J, Gerstein M. An analysis of the present system of scientific publishing: What's wrong and where to go from here Interdisciplinary Science Reviews. 28: 293-302. DOI: 10.1179/030801803225005238  0.8
2002 Lin J, Qian J, Greenbaum D, Bertone P, Das R, Echols N, Senes A, Stenger B, Gerstein M. GeneCensus: genome comparisons in terms of metabolic pathway activity and protein family sharing. Nucleic Acids Research. 30: 4574-82. PMID 12384605  0.8
2002 Lian Z, Kluger Y, Greenbaum DS, Tuck D, Gerstein M, Berliner N, Weissman SM, Newburger PE. Genomic and proteomic analysis of the myeloid differentiation program: global analysis of gene expression during induced differentiation in the MPRO cell line. Blood. 100: 3209-20. PMID 12384419 DOI: 10.1182/blood-2002-03-0850  0.8
2002 Edwards AM, Kus B, Jansen R, Greenbaum D, Greenblatt J, Gerstein M. Bridging structural biology and genomics: assessing protein interaction data with known complexes. Trends in Genetics : Tig. 18: 529-36. PMID 12350343 DOI: 10.1016/S0168-9525(02)02763-4  0.8
2002 Greenbaum D, Jansen R, Gerstein M. Analysis of mRNA expression and protein abundance data: an approach for the comparison of the enrichment of features in the cellular population of proteins and transcripts. Bioinformatics (Oxford, England). 18: 585-96. PMID 12016056  0.8
2002 Hegyi H, Lin J, Greenbaum D, Gerstein M. Structural genomics analysis: characteristics of atypical, common, and horizontally transferred folds. Proteins. 47: 126-41. PMID 11933060 DOI: 10.1002/prot.10078  0.8
2002 Jansen R, Greenbaum D, Gerstein M. Relating whole-genome expression data with protein-protein interactions. Genome Research. 12: 37-46. PMID 11779829 DOI: 10.1101/gr.205602  0.8
2001 Das R, Junker J, Greenbaum D, Gerstein MB. Global perspectives on proteins: comparing genomes in terms of folds, pathways and beyond. The Pharmacogenomics Journal. 1: 115-25. PMID 11911438  0.72
2001 Luscombe NM, Greenbaum D, Gerstein M. What is bioinformatics? A proposed definition and overview of the field. Methods of Information in Medicine. 40: 346-58. PMID 11552348  0.8
2001 Greenbaum D, Luscombe NM, Jansen R, Qian J, Gerstein M. Interrelating different types of genomic data, from proteome to secretome: 'oming in on function. Genome Research. 11: 1463-8. PMID 11544189 DOI: 10.1101/gr.207401  0.8
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