Vadim Alexandrov, Ph.D. - Publications

Yale University, New Haven, CT 
Computational Biology and Bioinformatics

14 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any innacuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2010 Alexandrov VA, Didenco PI, Kulikauskas VS, Sabirov AS, Filippov GM, Chernysh VS. Ion motion in a system of partially ordered nanotubes Bulletin of the Russian Academy of Sciences: Physics. 74: 1633-1636. DOI: 10.3103/S1062873810110298  0.4
2006 Killeen AA, Ossina N, McGlennen RC, Minnerath S, Borgos J, Alexandrov V, Sarvazyan A. Protein self-organization patterns in dried serum reveal changes in B-cell disorders. Molecular Diagnosis & Therapy. 10: 371-80. PMID 17154654  0.4
2005 Alexandrov V, Lehnert U, Echols N, Milburn D, Engelman D, Gerstein M. Normal modes for predicting protein motions: a comprehensive database assessment and associated Web tool. Protein Science : a Publication of the Protein Society. 14: 633-43. PMID 15722444 DOI: 10.1110/ps.04882105  0.4
2004 Alexandrov V, Gerstein M. Using 3D Hidden Markov Models that explicitly represent spatial coordinates to model and compare protein structures. Bmc Bioinformatics. 5: 2. PMID 14715091 DOI: 10.1186/1471-2105-5-2  0.4
2003 Krebs WG, Tsai J, Alexandrov V, Junker J, Jansen R, Gerstein M. Tools and databases to analyze protein flexibility; approaches to mapping implied features onto sequences. Methods in Enzymology. 374: 544-84. PMID 14696388 DOI: 10.1016/S0076-6879(03)74023-3  0.4
2003 Pajak J, Ramaekers R, Rospenk M, Alexandrov V, Stepanian S, Adamowicz L, Maes G. Matrix-isolation FT-IR studies and theoretical calculations of the vibrational properties of 4-methyl-2′-hydroxy-4′-ethyloxyazobenzene Chemical Physics. 286: 193-204. DOI: 10.1016/S0301-0104(02)00922-9  0.4
2002 Krebs WG, Alexandrov V, Wilson CA, Echols N, Yu H, Gerstein M. Normal mode analysis of macromolecular motions in a database framework: developing mode concentration as a useful classifying statistic. Proteins. 48: 682-95. PMID 12211036 DOI: 10.1002/prot.10168  0.4
2002 Liu Y, Luscombe NM, Alexandrov V, Bertone P, Harrison P, Zhang Z, Gerstein M. Structural genomics: a new era for pharmaceutical research. Genome Biology. 3: REPORTS4004. PMID 11864367  0.4
2001 Qian J, Stenger B, Wilson CA, Lin J, Jansen R, Teichmann SA, Park J, Krebs WG, Yu H, Alexandrov V, Echols N, Gerstein M. PartsList: a web-based system for dynamically ranking protein folds based on disparate attributes, including whole-genome expression and interaction information. Nucleic Acids Research. 29: 1750-64. PMID 11292848  0.4
2001 Alexandrov V, Gerstein M. Calculating populations of subcellular compartments using density matrix formalism International Journal of Quantum Chemistry. 85: 693-696. DOI: 10.1002/qua.1704  0.4
1999 Alexandrov V, Filippov I, Adamowicz L, Salzman WR. Passing dynamic objects by reference in Fortran 90: Application to time-dependent quantum chemistry Computers and Chemistry. 23: 25-31.  0.4
1998 Alexandrov V, Stepanian S, Adamowicz L. Theoretical ab initio study of O-H vibrational band in gas-phase glycine conformers Chemical Physics Letters. 291: 110-120.  0.4
1998 Alexandrov V, Smith DMA, Rostkowska H, Nowak MJ, Adamowicz L, McCarthy W. Theoretical study of the O-H stretching band in 3-hydroxy-2-methyl-4-pyrone Journal of Chemical Physics. 108: 9685-9693.  0.4
1995 Alexandrov V, Piecuch P, Adamowicz L. State-selective multi-reference coupled-cluster theory employing the single-reference formalism: Application to an excited state of H8 The Journal of Chemical Physics. 102: 3301-3306.  0.4
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