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Kristofor J. Webb, Ph.D. - Publications

Affiliations: 
2010 University of California, Los Angeles, Los Angeles, CA 
Area:
macromolecular repair for DNA and proteins
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24 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Ding Y, Ball KA, Webb KJ, Gao Y, D'Alessandro A, Old WM, Stowell MHB, Ding X. On-Chip Acousto Thermal Shift Assay for Rapid and Sensitive Assessment of Protein Thermodynamic Stability. Small (Weinheim An Der Bergstrasse, Germany). e2003506. PMID 32893496 DOI: 10.1002/Smll.202003506  0.433
2018 Fu X, Sokolova V, Webb KJ, Old W, Park S. Ubiquitin-dependent switch during assembly of the proteasomal ATPases mediated by Not4 ubiquitin ligase. Proceedings of the National Academy of Sciences of the United States of America. PMID 30530678 DOI: 10.1073/Pnas.1805353115  0.375
2018 Lee CM, Feke A, Li MW, Adamchek C, Webb K, Pruneda-Paz J, Bennett EJ, Kay SA, Gendron JM. Decoys untangle complicated redundancy and reveal targets of circadian clock F-box proteins. Plant Physiology. PMID 29794020 DOI: 10.1104/Pp.18.00331  0.443
2016 Rotcheewaphan S, Belisle JT, Webb KJ, Kim HJ, Spencer JS, Borlee BR. Diguanylate cyclase activity of the Mycobacterium leprae T cell antigen ML1419c. Microbiology (Reading, England). PMID 27450520 DOI: 10.1099/Mic.0.000339  0.357
2016 Gendron JM, Webb K, Yang B, Rising L, Zuzow N, Bennett EJ. Using the ubiquitin-modified proteome to monitor distinct and spatially restricted protein homeostasis dysfunction. Molecular & Cellular Proteomics : McP. PMID 27185884 DOI: 10.1074/Mcp.M116.058420  0.505
2016 Fu R, Olsen MT, Webb K, Bennett EJ, Lykke-Andersen J. Recruitment of the 4EHP-GYF2 cap-binding complex to tetraproline motifs of tristetraprolin promotes repression and degradation of mRNAs with AU-rich elements. Rna (New York, N.Y.). PMID 26763119 DOI: 10.1261/Rna.054833.115  0.367
2015 Higgins R, Gendron JM, Rising L, Mak R, Webb K, Kaiser SE, Zuzow N, Riviere P, Yang B, Fenech E, Tang X, Lindsay SA, Christianson JC, Hampton RY, Wasserman SA, et al. The Unfolded Protein Response Triggers Site-Specific Regulatory Ubiquitylation of 40S Ribosomal Proteins. Molecular Cell. 59: 35-49. PMID 26051182 DOI: 10.1016/J.Molcel.2015.04.026  0.521
2014 Lyumkis D, Oliveira dos Passos D, Tahara EB, Webb K, Bennett EJ, Vinterbo S, Potter CS, Carragher B, Joazeiro CA. Structural basis for translational surveillance by the large ribosomal subunit-associated protein quality control complex. Proceedings of the National Academy of Sciences of the United States of America. 111: 15981-6. PMID 25349383 DOI: 10.1073/Pnas.1413882111  0.44
2014 Fonslow BR, Stein BD, Webb KJ, Xu T, Choi J, Park SK, Yates JR. Addendum: Digestion and depletion of abundant proteins improves proteomic coverage. Nature Methods. 11: 347-8. PMID 24724171 DOI: 10.1038/Nmeth0314-347  0.381
2013 Ziemba A, Hill S, Sandoval D, Webb K, Bennett EJ, Kleiger G. Multimodal mechanism of action for the Cdc34 acidic loop: a case study for why ubiquitin-conjugating enzymes have loops and tails. The Journal of Biological Chemistry. 288: 34882-96. PMID 24129577 DOI: 10.1074/Jbc.M113.509190  0.41
2013 Webb K, Bennett EJ. Eavesdropping on PTM cross-talk through serial enrichment. Nature Methods. 10: 620-1. PMID 23807195 DOI: 10.1038/Nmeth.2526  0.412
2013 Webb KJ, Xu T, Park SK, Yates JR. Modified MuDPIT separation identified 4488 proteins in a system-wide analysis of quiescence in yeast. Journal of Proteome Research. 12: 2177-84. PMID 23540446 DOI: 10.1021/Pr400027M  0.445
2013 Fonslow BR, Stein BD, Webb KJ, Xu T, Choi J, Park SK, Yates JR. Digestion and depletion of abundant proteins improves proteomic coverage. Nature Methods. 10: 54-6. PMID 23160281 DOI: 10.1038/Nmeth.2250  0.51
2012 Young BD, Weiss DI, Zurita-Lopez CI, Webb KJ, Clarke SG, McBride AE. Identification of methylated proteins in the yeast small ribosomal subunit: a role for SPOUT methyltransferases in protein arginine methylation. Biochemistry. 51: 5091-104. PMID 22650761 DOI: 10.1021/Bi300186G  0.83
2011 Webb KJ, Al-Hadid Q, Zurita-Lopez CI, Young BD, Lipson RS, Clarke SG. The ribosomal l1 protuberance in yeast is methylated on a lysine residue catalyzed by a seven-beta-strand methyltransferase. The Journal of Biological Chemistry. 286: 18405-13. PMID 21460220 DOI: 10.1074/Jbc.M110.200410  0.764
2010 Webb KJ, Zurita-Lopez CI, Al-Hadid Q, Laganowsky A, Young BD, Lipson RS, Souda P, Faull KF, Whitelegge JP, Clarke SG. A novel 3-methylhistidine modification of yeast ribosomal protein Rpl3 is dependent upon the YIL110W methyltransferase. The Journal of Biological Chemistry. 285: 37598-606. PMID 20864530 DOI: 10.1074/Jbc.M110.170787  0.77
2010 Lipson RS, Webb KJ, Clarke SG. Two novel methyltransferases acting upon eukaryotic elongation factor 1A in Saccharomyces cerevisiae. Archives of Biochemistry and Biophysics. 500: 137-43. PMID 20510667 DOI: 10.1016/J.Abb.2010.05.023  0.811
2010 Webb KJ, Lipson RS, Al-Hadid Q, Whitelegge JP, Clarke SG. Identification of protein N-terminal methyltransferases in yeast and humans. Biochemistry. 49: 5225-35. PMID 20481588 DOI: 10.1021/Bi100428X  0.811
2010 Lipson RS, Webb KJ, Clarke SG. Rmt1 catalyzes zinc-finger independent arginine methylation of ribosomal protein Rps2 in Saccharomyces cerevisiae. Biochemical and Biophysical Research Communications. 391: 1658-62. PMID 20035717 DOI: 10.1016/J.Bbrc.2009.12.112  0.81
2008 Webb KJ, Laganowsky A, Whitelegge JP, Clarke SG. Identification of two SET domain proteins required for methylation of lysine residues in yeast ribosomal protein Rpl42ab. The Journal of Biological Chemistry. 283: 35561-8. PMID 18957409 DOI: 10.1074/Jbc.M806006200  0.738
2008 Linster CL, Adler LN, Webb K, Christensen KC, Brenner C, Clarke SG. A second GDP-L-galactose phosphorylase in arabidopsis en route to vitamin C. Covalent intermediate and substrate requirements for the conserved reaction. The Journal of Biological Chemistry. 283: 18483-92. PMID 18463094 DOI: 10.1074/Jbc.M802594200  0.744
2007 Sayegh J, Webb K, Cheng D, Bedford MT, Clarke SG. Regulation of protein arginine methyltransferase 8 (PRMT8) activity by its N-terminal domain. The Journal of Biological Chemistry. 282: 36444-53. PMID 17925405 DOI: 10.1074/Jbc.M704650200  0.786
2007 Zou Y, Webb K, Perna AD, Zhang Q, Clarke S, Wang Y. A mass spectrometric study on the in vitro methylation of HMGA1a and HMGA1b proteins by PRMTs: methylation specificity, the effect of binding to AT-rich duplex DNA, and the effect of C-terminal phosphorylation. Biochemistry. 46: 7896-906. PMID 17550233 DOI: 10.1021/Bi6024897  0.717
2005 Miranda TB, Webb KJ, Edberg DD, Reeves R, Clarke S. Protein arginine methyltransferase 6 specifically methylates the nonhistone chromatin protein HMGA1a. Biochemical and Biophysical Research Communications. 336: 831-5. PMID 16157300 DOI: 10.1016/J.Bbrc.2005.08.179  0.817
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