Year |
Citation |
Score |
2015 |
Austin JM, Jha AK, Romano PS, Singer SJ, Vogus TJ, Wachter RM, Pronovost PJ. National hospital ratings systems share few common scores and may generate confusion instead of clarity. Health Affairs (Project Hope). 34: 423-30. PMID 25732492 DOI: 10.1377/Hlthaff.2014.0201 |
0.401 |
|
2012 |
Baxa MC, Haddadian EJ, Jha AK, Freed KF, Sosnick TR. Context and force field dependence of the loss of protein backbone entropy upon folding using realistic denatured and native state ensembles. Journal of the American Chemical Society. 134: 15929-36. PMID 22928488 DOI: 10.1021/Ja3064028 |
0.413 |
|
2012 |
Debartolo J, Jha A, Freed KF, Sosnick TR. Local Backbone Preferences and Nearest-Neighbor Effects in the Unfolded and Native States Protein and Peptide Folding, Misfolding, and Non-Folding. 79-98. DOI: 10.1002/9781118183373.ch3 |
0.356 |
|
2011 |
Haddadian EJ, Gong H, Jha AK, Yang X, Debartolo J, Hinshaw JR, Rice PA, Sosnick TR, Freed KF. Automated real-space refinement of protein structures using a realistic backbone move set. Biophysical Journal. 101: 899-909. PMID 21843481 DOI: 10.1016/J.Bpj.2011.06.063 |
0.596 |
|
2009 |
DeBartolo J, Colubri A, Jha AK, Fitzgerald JE, Freed KF, Sosnick TR. Mimicking the folding pathway to improve homology-free protein structure prediction. Proceedings of the National Academy of Sciences of the United States of America. 106: 3734-9. PMID 19237560 DOI: 10.1073/Pnas.0811363106 |
0.456 |
|
2008 |
Kent A, Jha AK, Fitzgerald JE, Freed KF. Benchmarking implicit solvent folding simulations of the amyloid β(10-35) fragment Journal of Physical Chemistry B. 112: 6175-6186. PMID 18348560 DOI: 10.1021/Jp077099H |
0.405 |
|
2008 |
Jha AK, Freed KF. Solvation effect on conformations of 1,2:dimethoxyethane: Charge-dependent nonlinear response in implicit solvent models Journal of Chemical Physics. 128. PMID 18205504 DOI: 10.1063/1.2815764 |
0.385 |
|
2007 |
Fitzgerald JE, Jha AK, Colubri A, Sosnick TR, Freed KF. Reduced C(beta) statistical potentials can outperform all-atom potentials in decoy identification. Protein Science : a Publication of the Protein Society. 16: 2123-39. PMID 17893359 DOI: 10.1110/Ps.072939707 |
0.39 |
|
2007 |
Fitzgerald JE, Jha AK, Sosnick TR, Freed KF. Polypeptide motions are dominated by peptide group oscillations resulting from dihedral angle correlations between nearest neighbors. Biochemistry. 46: 669-82. PMID 17223689 DOI: 10.1021/Bi061575X |
0.365 |
|
2006 |
Colubri A, Jha AK, Shen MY, Sali A, Berry RS, Sosnick TR, Freed KF. Minimalist representations and the importance of nearest neighbor effects in protein folding simulations. Journal of Molecular Biology. 363: 835-57. PMID 16982067 DOI: 10.1016/J.Jmb.2006.08.035 |
0.579 |
|
2006 |
Pandit AD, Jha A, Freed KF, Sosnick TR. Small proteins fold through transition states with native-like topologies. Journal of Molecular Biology. 361: 755-70. PMID 16876194 DOI: 10.1016/J.Jmb.2006.06.041 |
0.495 |
|
2005 |
Jha AK, Colubri A, Freed KF, Sosnick TR. Statistical coil model of the unfolded state: resolving the reconciliation problem. Proceedings of the National Academy of Sciences of the United States of America. 102: 13099-104. PMID 16131545 DOI: 10.1073/Pnas.0506078102 |
0.444 |
|
2005 |
Jha AK, Colubri A, Zaman MH, Koide S, Sosnick TR, Freed KF. Helix, sheet, and polyproline II frequencies and strong nearest neighbor effects in a restricted coil library. Biochemistry. 44: 9691-702. PMID 16008354 DOI: 10.1021/Bi0474822 |
0.402 |
|
1999 |
Datta SN, Nehra V, Jha A. Electronic Structure of a Rieske Iron−Sulfur Complex and the Calculation of Its Reduction Potential The Journal of Physical Chemistry B. 103: 8768-8772. DOI: 10.1021/Jp991758B |
0.327 |
|
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