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Chunhua Weng, Ph.D. - Publications

Affiliations: 
2005 University of Washington, Seattle, Seattle, WA 
Area:
biomedical and health informatics

62 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2017 Chakrabarti S, Sen A, Huser V, Hruby GW, Rusanov A, Albers DJ, Weng C. An Interoperable Similarity-based Cohort Identification Method Using the OMOP Common Data Model version 5.0. Journal of Healthcare Informatics Research. 1: 1-18. PMID 28776047 DOI: 10.1007/s41666-017-0005-6  0.32
2016 He Z, Ryan P, Hoxha J, Wang S, Carini S, Sim I, Weng C. Multivariate analysis of the population representativeness of related clinical studies. Journal of Biomedical Informatics. PMID 26820188 DOI: 10.1016/J.Jbi.2016.01.007  0.88
2015 Weng C. Optimizing Clinical Research Participant Selection with Informatics. Trends in Pharmacological Sciences. 36: 706-9. PMID 26549161 DOI: 10.1016/J.Tips.2015.08.007  0.88
2015 He Z, Wang S, Borhanian E, Weng C. Assessing the Collective Population Representativeness of Related Type 2 Diabetes Trials by Combining Public Data from ClinicalTrials.gov and NHANES. Studies in Health Technology and Informatics. 216: 569-73. PMID 26262115 DOI: 10.3233/978-1-61499-564-7-569  0.88
2015 Gordon CL, Weng C. Combining expert knowledge and knowledge automatically acquired from electronic data sources for continued ontology evaluation and improvement. Journal of Biomedical Informatics. PMID 26212414 DOI: 10.1016/J.Jbi.2015.07.014  0.88
2015 Hao T, Weng C. Adaptive semantic tag mining from heterogeneous clinical research texts. Methods of Information in Medicine. 54: 164-70. PMID 25327613 DOI: 10.3414/Me13-01-0130  0.88
2014 Weng C, Yaman A, Lin K, He Z. Trend and Network Analysis of Common Eligibility Features for Cancer Trials in ClinicalTrials.gov. Smart Health : International Conference, Icsh 2014, Beijing, China, July 10-11, 2014. Proceedings / Xiaolong Zheng...[and 5 More] (Eds.). Icsh (Conference : Smart Health) (2014 : Beijing, China). 8549: 130-141. PMID 26998530 DOI: 10.1007/978-3-319-08416-9_13  0.88
2014 He Z, Carini S, Hao T, Sim I, Weng C. A method for analyzing commonalities in clinical trial target populations. Amia ... Annual Symposium Proceedings / Amia Symposium. Amia Symposium. 2014: 1777-86. PMID 25954450  0.88
2014 Fort D, Wilcox AB, Weng C. Could Patient Self-reported Health Data Complement EHR for Phenotyping? Amia ... Annual Symposium Proceedings / Amia Symposium. Amia Symposium. 2014: 1738-47. PMID 25954446  0.88
2014 Hanauer DA, Hruby GW, Fort DG, Rasmussen LV, Mendonça EA, Weng C. What Is Asked in Clinical Data Request Forms? A Multi-site Thematic Analysis of Forms Towards Better Data Access Support. Amia ... Annual Symposium Proceedings / Amia Symposium. Amia Symposium. 2014: 616-25. PMID 25954367  0.32
2014 Bales ME, Dine DC, Merrill JA, Johnson SB, Bakken S, Weng C. Associating co-authorship patterns with publications in high-impact journals. Journal of Biomedical Informatics. 52: 311-8. PMID 25046832 DOI: 10.1016/J.Jbi.2014.07.015  0.88
2014 Weng C, Li Y, Ryan P, Zhang Y, Liu F, Gao J, Bigger JT, Hripcsak G. A distribution-based method for assessing the differences between clinical trial target populations and patient populations in electronic health records. Applied Clinical Informatics. 5: 463-79. PMID 25024761 DOI: 10.4338/Aci-2013-12-Ra-0105  0.88
2014 Weng C, Payne PR, Velez M, Johnson SB, Bakken S. Towards symbiosis in knowledge representation and natural language processing for structuring clinical practice guidelines. Studies in Health Technology and Informatics. 201: 461-9. PMID 24943582 DOI: 10.3233/978-1-61499-415-2-461  0.88
2014 Rusanov A, Weiskopf NG, Wang S, Weng C. Hidden in plain sight: bias towards sick patients when sampling patients with sufficient electronic health record data for research. Bmc Medical Informatics and Decision Making. 14: 51. PMID 24916006 DOI: 10.1186/1472-6947-14-51  0.88
2014 Hao T, Rusanov A, Boland MR, Weng C. Clustering clinical trials with similar eligibility criteria features. Journal of Biomedical Informatics. 52: 112-20. PMID 24496068 DOI: 10.1016/J.Jbi.2014.01.009  0.88
2014 Boland MR, Rusanov A, So Y, Lopez-Jimenez C, Busacca L, Steinman RC, Bakken S, Bigger JT, Weng C. From expert-derived user needs to user-perceived ease of use and usefulness: a two-phase mixed-methods evaluation framework. Journal of Biomedical Informatics. 52: 141-50. PMID 24333875 DOI: 10.1016/J.Jbi.2013.12.004  0.88
2013 Weiskopf NG, Rusanov A, Weng C. Sick patients have more data: the non-random completeness of electronic health records. Amia ... Annual Symposium Proceedings / Amia Symposium. Amia Symposium. 2013: 1472-7. PMID 24551421  0.88
2013 Gordon CL, Pouch S, Cowell LG, Boland MR, Platt HL, Goldfain A, Weng C. Design and evaluation of a bacterial clinical infectious diseases ontology. Amia ... Annual Symposium Proceedings / Amia Symposium. Amia Symposium. 2013: 502-11. PMID 24551353  0.88
2013 Overby CL, Kohane I, Kannry JL, Williams MS, Starren J, Bottinger E, Gottesman O, Denny JC, Weng C, Tarczy-Hornoch P, Hripcsak G. Opportunities for genomic clinical decision support interventions. Genetics in Medicine : Official Journal of the American College of Medical Genetics. 15: 817-23. PMID 24051479 DOI: 10.1038/Gim.2013.128  0.88
2013 Miotto R, Weng C. Unsupervised mining of frequent tags for clinical eligibility text indexing. Journal of Biomedical Informatics. 46: 1145-51. PMID 24036004 DOI: 10.1016/J.Jbi.2013.08.012  0.88
2013 Boland MR, Hripcsak G, Shen Y, Chung WK, Weng C. Defining a comprehensive verotype using electronic health records for personalized medicine. Journal of the American Medical Informatics Association : Jamia. 20: e232-8. PMID 24001516 DOI: 10.1136/Amiajnl-2013-001932  0.88
2013 Nakikj D, Weng C. Extending VIVO ontology to represent research and educational resources in an academic biomedical informatics department. Studies in Health Technology and Informatics. 192: 1206. PMID 23920980 DOI: 10.3233/978-1-61499-289-9-1206  0.88
2013 Boland MR, Miotto R, Weng C. A method for probing disease relatedness using common clinical eligibility criteria. Studies in Health Technology and Informatics. 192: 481-5. PMID 23920601 DOI: 10.3233/978-1-61499-289-9-481  0.88
2013 Miotto R, Jiang S, Weng C. eTACTS: a method for dynamically filtering clinical trial search results. Journal of Biomedical Informatics. 46: 1060-7. PMID 23916863 DOI: 10.1016/J.Jbi.2013.07.014  0.88
2013 Overby CL, Pathak J, Gottesman O, Haerian K, Perotte A, Murphy S, Bruce K, Johnson S, Talwalkar J, Shen Y, Ellis S, Kullo I, Chute C, Friedman C, Bottinger E, ... ... Weng C, et al. A collaborative approach to developing an electronic health record phenotyping algorithm for drug-induced liver injury. Journal of the American Medical Informatics Association : Jamia. 20: e243-52. PMID 23837993 DOI: 10.1136/Amiajnl-2013-001930  0.88
2013 Weiskopf NG, Hripcsak G, Swaminathan S, Weng C. Defining and measuring completeness of electronic health records for secondary use. Journal of Biomedical Informatics. 46: 830-6. PMID 23820016 DOI: 10.1016/J.Jbi.2013.06.010  0.88
2013 Weng C, Li Y, Berhe S, Boland MR, Gao J, Hruby GW, Steinman RC, Lopez-Jimenez C, Busacca L, Hripcsak G, Bakken S, Bigger JT. An Integrated Model for Patient Care and Clinical Trials (IMPACT) to support clinical research visit scheduling workflow for future learning health systems. Journal of Biomedical Informatics. 46: 642-52. PMID 23684593 DOI: 10.1016/J.Jbi.2013.05.001  0.88
2013 Boland MR, Miotto R, Gao J, Weng C. Feasibility of feature-based indexing, clustering, and search of clinical trials Methods of Information in Medicine. 52: 382-394. PMID 23666475 DOI: 10.3414/Me12-01-0092  0.88
2013 Boland MR, Hripcsak G, Albers DJ, Wei Y, Wilcox AB, Wei J, Li J, Lin S, Breene M, Myers R, Zimmerman J, Papapanou PN, Weng C. Discovering medical conditions associated with periodontitis using linked electronic health records. Journal of Clinical Periodontology. 40: 474-82. PMID 23495669 DOI: 10.1111/Jcpe.12086  0.88
2013 Hruby GW, McKiernan J, Bakken S, Weng C. A centralized research data repository enhances retrospective outcomes research capacity: a case report. Journal of the American Medical Informatics Association : Jamia. 20: 563-7. PMID 23322812 DOI: 10.1136/Amiajnl-2012-001302  0.88
2013 Luo Z, Miotto R, Weng C. A human-computer collaborative approach to identifying common data elements in clinical trial eligibility criteria. Journal of Biomedical Informatics. 46: 33-9. PMID 22846169 DOI: 10.1016/J.Jbi.2012.07.006  0.88
2013 Weiskopf NG, Weng C. Methods and dimensions of electronic health record data quality assessment: enabling reuse for clinical research. Journal of the American Medical Informatics Association : Jamia. 20: 144-51. PMID 22733976 DOI: 10.1136/Amiajnl-2011-000681  0.88
2013 Hao T, Rusanov A, Weng C. Extracting and normalizing temporal expressions in clinical data requests from researchers Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 8040: 41-51. DOI: 10.1007/978-3-642-39844-5_7  0.88
2012 Boland MR, Trembowelski S, Bakken S, Weng C. An initial log analysis of usage patterns on a research networking system. Clinical and Translational Science. 5: 340-7. PMID 22883612 DOI: 10.1111/J.1752-8062.2012.00418.X  0.88
2012 Weng C, Appelbaum P, Hripcsak G, Kronish I, Busacca L, Davidson KW, Bigger JT. Using EHRs to integrate research with patient care: promises and challenges. Journal of the American Medical Informatics Association : Jamia. 19: 684-7. PMID 22542813 DOI: 10.1136/Amiajnl-2012-000878  0.88
2012 Kahn MG, Weng C. Clinical research informatics: a conceptual perspective. Journal of the American Medical Informatics Association : Jamia. 19: e36-42. PMID 22523344 DOI: 10.1136/Amiajnl-2012-000968  0.88
2011 Weng C, Batres C, Borda T, Weiskopf NG, Wilcox AB, Bigger JT, Davidson KW. A real-time screening alert improves patient recruitment efficiency. Amia ... Annual Symposium Proceedings / Amia Symposium. Amia Symposium. 2011: 1489-98. PMID 22195213  0.88
2011 Weng C, Wu X, Luo Z, Boland MR, Theodoratos D, Johnson SB. EliXR: an approach to eligibility criteria extraction and representation. Journal of the American Medical Informatics Association : Jamia. 18: i116-24. PMID 21807647 DOI: 10.1136/Amiajnl-2011-000321  0.88
2011 Luo Z, Yetisgen-Yildiz M, Weng C. Dynamic categorization of clinical research eligibility criteria by hierarchical clustering. Journal of Biomedical Informatics. 44: 927-35. PMID 21689783 DOI: 10.1016/J.Jbi.2011.06.001  0.88
2011 Zhao D, Weng C. Combining PubMed knowledge and EHR data to develop a weighted bayesian network for pancreatic cancer prediction. Journal of Biomedical Informatics. 44: 859-68. PMID 21642013 DOI: 10.1016/J.Jbi.2011.05.004  0.88
2010 Botsis T, Anagnostou VK, Hartvigsen G, Hripcsak G, Weng C. Developing a multivariable prognostic model for pancreatic endocrine tumors using the clinical data warehouse resources of a single institution. Applied Clinical Informatics. 1: 38-49. PMID 21552466 DOI: 10.4338/Aci-2009-12-Ra-0026  0.88
2010 Gallagher D, Larson EL, Wang YH, Richards B, Weng C, Hametz P, Begg MD, Chung WK, Boden-Albala B, Akabas SR. Identifying interdisciplinary research priorities to prevent and treat pediatric obesity in New York City. Clinical and Translational Science. 3: 172-7. PMID 20718818 DOI: 10.1111/J.1752-8062.2010.00210.X  0.88
2010 Botsis T, Anagnostou VK, Hartvigsen G, Hripcsak G, Weng C. Modeling prognostic factors in resectable pancreatic adenocarcinomas. Cancer Informatics. 7: 281-91. PMID 20508721 DOI: 10.4137/Cin.S3835  0.88
2010 Weng C, Tu SW, Sim I, Richesson R. Formal representation of eligibility criteria: a literature review. Journal of Biomedical Informatics. 43: 451-67. PMID 20034594 DOI: 10.1016/J.Jbi.2009.12.004  0.88
2009 Thadani SR, Weng C, Bigger JT, Ennever JF, Wajngurt D. Electronic screening improves efficiency in clinical trial recruitment. Journal of the American Medical Informatics Association : Jamia. 16: 869-73. PMID 19717797 DOI: 10.1197/Jamia.M3119  0.88
2009 Zhu X, Fan JW, Baorto DM, Weng C, Cimino JJ. A review of auditing methods applied to the content of controlled biomedical terminologies. Journal of Biomedical Informatics. 42: 413-25. PMID 19285571 DOI: 10.1016/J.Jbi.2009.03.003  0.88
2008 Li L, Chase HS, Patel CO, Friedman C, Weng C. Comparing ICD9-encoded diagnoses and NLP-processed discharge summaries for clinical trials pre-screening: a case study. Amia ... Annual Symposium Proceedings / Amia Symposium. Amia Symposium. 404-8. PMID 18999285  0.88
2008 Weng C, Gallagher D, Bales ME, Bales ME, Bakken S, Ginsberg HN, Ginsberg H. Understanding interdisciplinary health sciences collaborations: a campus-wide survey of obesity experts. Amia ... Annual Symposium Proceedings / Amia Symposium. Amia Symposium. 798-802. PMID 18999235  0.88
2008 Patel CO, Weng C. ECRL: an eligibility criteria representation language based on the UMLS Semantic Network. Amia ... Annual Symposium Proceedings / Amia Symposium. Amia Symposium. 1084. PMID 18999200  0.88
2008 Bales M, Johnson SB, Weng C. Social network analysis of interdisciplinarity in obesity research. Amia ... Annual Symposium Proceedings / Amia Symposium. Amia Symposium. 870. PMID 18999104  0.88
2008 Bakken S, Yen PY, Weng C. Informatics tools for meeting information and communication needs related to interdisciplinary research competency development. Amia ... Annual Symposium Proceedings / Amia Symposium. Amia Symposium. 869. PMID 18998941  0.88
2007 Weng C, Gennari JH, Fridsma DB. User-centered semantic harmonization: a case study. Journal of Biomedical Informatics. 40: 353-64. PMID 17452021 DOI: 10.1016/J.Jbi.2007.03.004  0.88
2007 Weng C, McDonald DW, Sparks D, McCoy J, Gennari JH. Participatory design of a collaborative clinical trial protocol writing system. International Journal of Medical Informatics. 76: S245-51. PMID 16798070 DOI: 10.1016/J.Ijmedinf.2006.05.035  0.88
2006 Weng C, Fridsma DB. A call for collaborative semantics harmonization. Amia ... Annual Symposium Proceedings / Amia Symposium. Amia Symposium. 1142. PMID 17238761  0.88
2005 Weng C. Why it is hard to support group work in distributed healthcare organizations: empirical knowledge of the social-technical gap. Amia ... Annual Symposium Proceedings / Amia Symposium. Amia Symposium. 804-8. PMID 16779151  0.88
2005 Gennari JH, Weng C, Benedetti J, McDonald DW. Asynchronous communication among clinical researchers: a study for systems design. International Journal of Medical Informatics. 74: 797-807. PMID 16023408 DOI: 10.1016/J.Ijmedinf.2005.03.019  0.88
2004 Weng C, Gennari JH, McDonald DW. A collaborative clinical trial protocol writing system. Studies in Health Technology and Informatics. 107: 1481-6. PMID 15361061  0.88
2004 Gennari JH, Weng C, McDonald DW, Benedetti J, Green S. An ethnographic study of collaborative clinical trial protocol writing. Studies in Health Technology and Informatics. 107: 1461-5. PMID 15361057  0.88
2004 Weng C, Gennari JH. Asynchronous collaborative writing through annotations Proceedings of the Acm Conference On Computer Supported Cooperative Work, Cscw. 578-581.  0.88
2004 McDonald DW, Weng C, Gennari JH. The multiple views of inter-organizational authoring Proceedings of the Acm Conference On Computer Supported Cooperative Work, Cscw. 564-573.  0.88
2003 Weng C, Gennari JH, McDonald DW. Scenario-based participatory design of a collaborative clinical trial protocol authoring system. Amia ... Annual Symposium Proceedings / Amia Symposium. Amia Symposium. 1051. PMID 14728554  0.88
2002 Weng C, Kahn M, Gennari J. Temporal knowledge representation for scheduling tasks in clinical trial protocols. Proceedings / Amia ... Annual Symposium. Amia Symposium. 879-83. PMID 12463951  0.88
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