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David E. Konerding, Ph.D. - Publications

Affiliations: 
2001 University of California, San Francisco, San Francisco, CA 
Area:
Pharmaceutical Chemistry
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8 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2014 Kohlhoff KJ, Shukla D, Lawrenz M, Bowman GR, Konerding DE, Belov D, Altman RB, Pande VS. Cloud-based simulations on Google Exacycle reveal ligand modulation of GPCR activation pathways Nature Chemistry. 6: 15-21. PMID 24345941 DOI: 10.1038/Nchem.1821  0.322
2014 Conway P, Tyka MD, DiMaio F, Konerding DE, Baker D. Relaxation of backbone bond geometry improves protein energy landscape modeling. Protein Science : a Publication of the Protein Society. 23: 47-55. PMID 24265211 DOI: 10.1002/Pro.2389  0.335
2002 Konerding D, James TL, Trump E, Soto AM, Marky LA, Gmeiner WH. NMR structure of a gemcitabine-substituted model Okazaki fragment. Biochemistry. 41: 839-46. PMID 11790105 DOI: 10.1021/Bi015678L  0.521
2002 Chandonia J, Konerding DE, Allen DG, Choi I, Yokota H, Brenner SE. Computational Structural Genomics of a Complete Minimal Organism Genome Informatics. 13: 390-391. DOI: 10.11234/Gi1990.13.390  0.352
1999 Gmeiner WH, Cui W, Konerding DE, Keifer PA, Sharma SK, Soto AM, Marky LA, Lown JW. Shape-selective recognition of a model Okazaki fragment by geometrically-constrained bis-distamycins Journal of Biomolecular Structure and Dynamics. 17: 507-518. PMID 10636085 DOI: 10.1080/07391102.1999.10508381  0.425
1999 Konerding DE, Cheatham TE, Kollman PA, James TL. Restrained molecular dynamics of solvated duplex DNA using the particle mesh Ewald method. Journal of Biomolecular Nmr. 13: 119-31. PMID 10070753 DOI: 10.1023/A:1008353423074  0.525
1999 Gmeiner WH, Konerding D, James TL. Effect of cytarabine on the NMR structure of a model okazaki fragment from the SV40 genome. Biochemistry. 38: 1166-75. PMID 9930976 DOI: 10.1021/Bi981702S  0.545
1998 Ulyanov NB, Mujeeb A, Donati A, Furrer P, Liu H, Farr-Jones S, Konerding DE, Schmitz U, James TL. Determination of Structural Ensembles from NMR Data: Conformational Sampling and Probability Assessment Acs Symposium Series. 682: 181-194.  0.419
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