Xun Xu - Publications

Affiliations: 
BGI 

179 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Chen J, Jia Y, Sun Y, Liu K, Zhou C, Liu C, Li D, Liu G, Zhang C, Yang T, Huang L, Zhuang Y, Wang D, Xu D, Zhong Q, ... Xu X, et al. Global marine microbial diversity and its potential in bioprospecting. Nature. PMID 39232160 DOI: 10.1038/s41586-024-07891-2  0.376
2024 Liu L, Chen A, Li Y, Mulder J, Heyn H, Xu X. Spatiotemporal omics for biology and medicine. Cell. 187: 4488-4519. PMID 39178830 DOI: 10.1016/j.cell.2024.07.040  0.308
2024 Garg V, Bohra A, Mascher M, Spannagl M, Xu X, Bevan MW, Bennetzen JL, Varshney RK. Unlocking plant genetics with telomere-to-telomere genome assemblies. Nature Genetics. PMID 39048791 DOI: 10.1038/s41588-024-01830-7  0.393
2024 Liu X, Tong X, Zou L, Ju Y, Liu M, Han M, Lu H, Yang H, Wang J, Zong Y, Liu W, Xu X, Jin X, Xiao L, Jia H, et al. A genome-wide association study reveals the relationship between human genetic variation and the nasal microbiome. Communications Biology. 7: 139. PMID 38291185 DOI: 10.1038/s42003-024-05822-5  0.302
2023 Shen Y, Gao F, Wang Y, Wang Y, Zheng J, Gong J, Zhang J, Luo Z, Schindler D, Deng Y, Ding W, Lin T, Swidah R, Zhao H, Jiang S, ... ... Xu X, et al. Dissecting aneuploidy phenotypes by constructing Sc2.0 chromosome VII and SCRaMbLEing synthetic disomic yeast. Cell Genomics. 3: 100364. PMID 38020968 DOI: 10.1016/j.xgen.2023.100364  0.456
2023 Sahu SK, Liu M, Wang G, Chen Y, Li R, Fang D, Sahu DN, Mu W, Wei J, Liu J, Zhao Y, Zhang S, Lisby M, Liu X, Xu X, et al. Chromosome-scale genomes of commercially important mahoganies, Swietenia macrophylla and Khaya senegalensis. Scientific Data. 10: 832. PMID 38007506 DOI: 10.1038/s41597-023-02707-w  0.304
2023 Hao F, Liu X, Zhou B, Tian Z, Zhou L, Zong H, Qi J, He J, Zhang Y, Zeng P, Li Q, Wang K, Xia K, Guo X, Li L, ... ... Xu X, et al. Chromosome-level genomes of three key Allium crops and their trait evolution. Nature Genetics. 55: 1976-1986. PMID 37932434 DOI: 10.1038/s41588-023-01546-0  0.352
2023 Yang C, Zhou Y, Song Y, Wu D, Zeng Y, Nie L, Liu P, Zhang S, Chen G, Xu J, Zhou H, Zhou L, Qian X, Liu C, Tan S, ... Xu X, et al. The complete and fully-phased diploid genome of a male Han Chinese. Cell Research. PMID 37452091 DOI: 10.1038/s41422-023-00849-5  0.606
2023 Lin X, Hu T, Chen J, Liang H, Zhou J, Wu Z, Ye C, Jin X, Xu X, Zhang W, Jing X, Yang T, Wang J, Yang H, Kristiansen K, et al. The genomic landscape of reference genomes of cultivated human gut bacteria. Nature Communications. 14: 1663. PMID 36966151 DOI: 10.1038/s41467-023-37396-x  0.325
2023 Shao C, Sun S, Liu K, Wang J, Li S, Liu Q, Deagle BE, Seim I, Biscontin A, Wang Q, Liu X, Kawaguchi S, Liu Y, Jarman S, Wang Y, ... ... Xu X, et al. The enormous repetitive Antarctic krill genome reveals environmental adaptations and population insights. Cell. PMID 36868220 DOI: 10.1016/j.cell.2023.02.005  0.595
2022 Zhang L, Lan T, Lin C, Fu W, Yuan Y, Lin K, Li H, Kumar Sahu S, Liu Z, Chen D, Liu Q, Wang A, Wang X, Ma Y, Li S, ... ... Xu X, et al. Chromosome-scale genomes reveal genomic consequences of inbreeding in the South China tiger: a comparative study with the Amur tiger. Molecular Ecology Resources. PMID 35723950 DOI: 10.1111/1755-0998.13669  0.339
2022 Li Q, Wang M, Zhang P, Liu Y, Guo Q, Zhu Y, Wen T, Dai X, Zhang X, Nagel M, Dethlefsen BH, Xie N, Zhao J, Jiang W, Han L, ... ... Xu X, et al. A single-cell transcriptomic atlas tracking the neural basis of division of labour in an ant superorganism. Nature Ecology & Evolution. PMID 35711063 DOI: 10.1038/s41559-022-01784-1  0.411
2022 Yang Y, Zhao S, Sun G, Chen F, Zhang T, Song J, Yang W, Wang L, Zhan N, Yang X, Zhu X, Rao B, Yin Z, Zhou J, Yan H, ... ... Xu X, et al. Genomic architecture of fetal central nervous system anomalies using whole-genome sequencing. Npj Genomic Medicine. 7: 31. PMID 35562572 DOI: 10.1038/s41525-022-00301-4  0.301
2022 Wu Z, Chen H, Pan Y, Feng H, Fang D, Yang J, Wang Y, Yang J, Sahu SK, Liu J, Xing Y, Wang X, Liu M, Luo X, Gao P, ... ... Xu X, et al. The genome of Hippophae rhamnoides provides insights into a conserved molecular mechanism in actinorhizal and rhizobial symbiosis. The New Phytologist. PMID 35118662 DOI: 10.1111/nph.18017  0.322
2022 Lewin HA, Richards S, Lieberman Aiden E, Allende ML, Archibald JM, Bálint M, Barker KB, Baumgartner B, Belov K, Bertorelle G, Blaxter ML, Cai J, Caperello ND, Carlson K, Castilla-Rubio JC, ... ... Xu X, et al. The Earth BioGenome Project 2020: Starting the clock. Proceedings of the National Academy of Sciences of the United States of America. 119. PMID 35042800 DOI: 10.1073/pnas.2115635118  0.369
2022 Li L, Chen X, Fang D, Dong S, Guo X, Li N, Campos-Dominguez L, Wang W, Liu Y, Lang X, Peng Y, Tian D, Thomas DC, Mu W, Liu M, ... ... Xu X, et al. Genomes shed light on the evolution of Begonia, a mega-diverse genus. The New Phytologist. PMID 34997964 DOI: 10.1111/nph.17949  0.317
2021 Guang X, Lan T, Wan QH, Huang Y, Li H, Zhang M, Li R, Zhang Z, Lei Y, Zhang L, Zhang H, Li D, Li X, Li H, Xu Y, ... ... Xu X, et al. Chromosome-scale genomes provide new insights into subspecies divergence and evolutionary characteristics of the giant panda. Science Bulletin. 66: 2002-2013. PMID 36654170 DOI: 10.1016/j.scib.2021.02.002  0.348
2021 Guo X, Fang D, Sahu SK, Yang S, Guang X, Folk R, Smith SA, Chanderbali AS, Chen S, Liu M, Yang T, Zhang S, Liu X, Xu X, Soltis PS, et al. Chloranthus genome provides insights into the early diversification of angiosperms. Nature Communications. 12: 6930. PMID 34836973 DOI: 10.1038/s41467-021-26922-4  0.353
2021 Varshney RK, Roorkiwal M, Sun S, Bajaj P, Chitikineni A, Thudi M, Singh NP, Du X, Upadhyaya HD, Khan AW, Wang Y, Garg V, Fan G, Cowling WA, Crossa J, ... ... Xu X, et al. A chickpea genetic variation map based on the sequencing of 3,366 genomes. Nature. PMID 34759320 DOI: 10.1038/s41586-021-04066-1  0.362
2021 Han L, Lan T, Li D, Li H, Deng L, Peng Z, He S, Zhou Y, Han R, Li L, Lu Y, Lu H, Wang Q, Yang S, Zhu Y, ... ... Xu X, et al. Chromosome-scale assembly and whole-genome sequencing of 266 giant panda roundworms provide insights into their evolution, adaptation and potential drug targets. Molecular Ecology Resources. PMID 34549895 DOI: 10.1111/1755-0998.13504  0.328
2021 Zhao H, Sun S, Ding Y, Wang Y, Yue X, Du X, Wei Q, Fan G, Sun H, Lou Y, Yang H, Wang J, Xu X, Li L, Yang K, et al. Analysis of 427 genomes reveals moso bamboo population structure and genetic basis of property traits. Nature Communications. 12: 5466. PMID 34526499 DOI: 10.1038/s41467-021-25795-x  0.335
2021 Zhu J, Tian L, Chen P, Han M, Song L, Tong X, Sun X, Yang F, Lin Z, Liu X, Liu C, Wang X, Lin Y, Cai K, Hou Y, ... Xu X, et al. Over 50,000 Metagenomically Assembled Draft Genomes for the Human Oral Microbiome Reveal New Taxa. Genomics, Proteomics & Bioinformatics. PMID 34492339 DOI: 10.1016/j.gpb.2021.05.001  0.302
2021 Wei T, van Treuren R, Liu X, Zhang Z, Chen J, Liu Y, Dong S, Sun P, Yang T, Lan T, Wang X, Xiong Z, Liu Y, Wei J, Lu H, ... ... Xu X, et al. Whole-genome resequencing of 445 Lactuca accessions reveals the domestication history of cultivated lettuce. Nature Genetics. PMID 33846635 DOI: 10.1038/s41588-021-00831-0  0.328
2021 Wang K, Wang J, Zhu C, Yang L, Ren Y, Ruan J, Fan G, Hu J, Xu W, Bi X, Zhu Y, Song Y, Chen H, Ma T, Zhao R, ... ... Xu X, et al. African lungfish genome sheds light on the vertebrate water-to-land transition. Cell. PMID 33545087 DOI: 10.1016/j.cell.2021.01.047  0.602
2020 Mu W, Wei J, Yang T, Fan Y, Cheng L, Yang J, Mu R, Liu J, Zhao J, Sun W, Xu X, Liu X, Drmanac R, Liu H. The draft genome assembly of the critically endangered , a plant species with extremely small populations endemic to Yunnan Province, China. Gigabyte (Hong Kong, China). 2020: gigabyte4. PMID 36824597 DOI: 10.46471/gigabyte.4  0.315
2020 Fan Y, Sahu SK, Yang T, Mu W, Wei J, Cheng L, Yang J, Mu R, Liu J, Zhao J, Zhao Y, Xu X, Liu X, Liu H. Dissecting the genome of star fruit (Averrhoa carambola L.). Horticulture Research. 7: 94. PMID 34059631 DOI: 10.1038/s41438-020-0306-4  0.325
2020 Hao S, Han K, Meng L, Huang X, Cao W, Shi C, Zhang M, Wang Y, Liu Q, Zhang Y, Sun H, Seim I, Xu X, Liu X, Fan G. African Arowana Genome Provides Insights on Ancient Teleost Evolution. Iscience. 23: 101662. PMID 33134892 DOI: 10.1016/j.isci.2020.101662  0.331
2020 Zhang P, Zhao Y, Li C, Lin M, Dong L, Zhang R, Liu M, Li K, Zhang H, Liu X, Zhang Y, Yuan Y, Liu H, Seim I, Sun S, ... ... Xu X, et al. An Indo-Pacific Humpback Dolphin Genome Reveals Insights into Chromosome Evolution and the Demography of a Vulnerable Species. Iscience. 23: 101640. PMID 33103078 DOI: 10.1016/j.isci.2020.101640  0.505
2020 Fan G, Liu X, Sun S, Shi C, Du X, Han K, Yang B, Fu Y, Liu M, Seim I, Zhang H, Xu Q, Wang J, Su X, Shao L, ... ... Xu X, et al. The Chromosome Level Genome and Genome-wide Association Study for the Agronomic Traits of . Iscience. 23: 101538. PMID 33083766 DOI: 10.1016/J.Isci.2020.101538  0.675
2020 Han K, Shi C, Li L, Seim I, Lee SM, Xu X, Yang H, Fan G, Liu X. Lineage-specific evolution of mangrove plastid genomes. The Plant Genome. 13: e20019. PMID 33016609 DOI: 10.1002/Tpg2.20019  0.45
2020 Du Z, Kuang S, Li Y, Han P, Liu J, Wang Z, Huang Y, Guan Y, Xu X, Liu X, Banerjee S, Pan S. Family-Based Whole Genome Sequencing Identified Novel Variants in ABCA5 Gene in a Patient with Idiopathic Ventricular Tachycardia. Pediatric Cardiology. PMID 32939586 DOI: 10.1007/S00246-020-02446-4  0.384
2020 Xu M, Guo L, Gu S, Wang O, Zhang R, Peters BA, Fan G, Liu X, Xu X, Deng L, Zhang Y. TGS-GapCloser: A fast and accurate gap closer for large genomes with low coverage of error-prone long reads. Gigascience. 9. PMID 32893860 DOI: 10.1093/Gigascience/Giaa094  0.419
2020 Fan G, Song Y, Yang L, Huang X, Zhang S, Zhang M, Yang X, Chang Y, Zhang H, Li Y, Liu S, Yu L, Chu J, Seim I, Feng C, ... ... Xu X, et al. Initial data release and announcement of the 10,000 Fish Genomes Project (Fish10K). Gigascience. 9. PMID 32810278 DOI: 10.1093/Gigascience/Giaa080  0.349
2020 Li L, Wang S, Wang H, Sahu SK, Marin B, Li H, Xu Y, Liang H, Li Z, Cheng S, Reder T, Çebi Z, Wittek S, Petersen M, Melkonian B, ... ... Xu X, et al. Author Correction: The genome of Prasinoderma coloniale unveils the existence of a third phylum within green plants. Nature Ecology & Evolution. PMID 32678322 DOI: 10.1038/S41559-020-1268-5  0.333
2020 Xiao M, Liu X, Ji J, Li M, Li J, Yang L, Sun W, Ren P, Yang G, Zhao J, Liang T, Ren H, Chen T, Zhong H, Song W, ... ... Xu X, et al. Multiple approaches for massively parallel sequencing of SARS-CoV-2 genomes directly from clinical samples. Genome Medicine. 12: 57. PMID 32605661 DOI: 10.1186/S13073-020-00751-4  0.37
2020 Li L, Wang S, Wang H, Sahu SK, Marin B, Li H, Xu Y, Liang H, Li Z, Cheng S, Reder T, Çebi Z, Wittek S, Petersen M, Melkonian B, ... Xu X, et al. The genome of Prasinoderma coloniale unveils the existence of a third phylum within green plants. Nature Ecology & Evolution. PMID 32572216 DOI: 10.1038/S41559-020-1221-7  0.418
2020 Fan Y, Sahu SK, Yang T, Mu W, Wei J, Cheng L, Yang J, Mu R, Liu J, Zhao J, Zhao Y, Xu X, Liu X, Liu H. Dissecting the genome of star fruit ( L.). Horticulture Research. 7: 94. PMID 32528706 DOI: 10.1038/S41438-020-0306-4  0.435
2020 Li J, Zhong H, Ramayo-Caldas Y, Terrapon N, Lombard V, Potocki-Veronese G, Estellé J, Popova M, Yang Z, Zhang H, Li F, Tang S, Yang F, Chen W, Chen B, ... ... Xu X, et al. A catalog of microbial genes from the bovine rumen unveils a specialized and diverse biomass-degrading environment. Gigascience. 9. PMID 32473013 DOI: 10.1093/Gigascience/Giaa057  0.307
2020 Shi C, Han K, Li L, Seim I, Lee SM, Xu X, Yang H, Fan G, Liu X. Complete Chloroplast Genomes of 14 Mangroves: Phylogenetic and Comparative Genomic Analyses. Biomed Research International. 2020: 8731857. PMID 32462024 DOI: 10.1155/2020/8731857  0.458
2020 Weng J, Chen T, Xie Y, Xu X, Zhang G, Peters BA, Drmanac R. IterCluster: a barcode clustering algorithm for long fragment read analysis. Peerj. 8: e8431. PMID 32231869 DOI: 10.7717/Peerj.8431  0.404
2020 Sinha P, Singh VK, Saxena RK, Kale SM, Li Y, Garg V, Tang M, Khan AW, Kim KD, Chitikineni A, Saxena KB, Sameer Kumar CV, Liu X, Xu X, Jackson S, et al. Genome-wide analysis of epigenetic and transcriptional changes associated with heterosis in pigeonpea. Plant Biotechnology Journal. PMID 31925873 DOI: 10.1111/Pbi.13333  0.311
2019 Sahu SK, Liu M, Yssel A, Kariba R, Muthemba S, Jiang S, Song B, Hendre PS, Muchugi A, Jamnadass R, Kao SM, Featherston J, Zerega NJC, Xu X, Yang H, et al. Draft Genomes of Two Artocarpus Plants, Jackfruit (A. heterophyllus) and Breadfruit (A. altilis). Genes. 11. PMID 31878322 DOI: 10.3390/Genes11010027  0.404
2019 Chen X, Fang D, Wu C, Liu B, Liu Y, Sahu SK, Song B, Yang S, Yang T, Wei J, Wang X, Zhang W, Xu Q, Wang H, Yuan L, ... ... Xu X, et al. Comparative plastome analysis of root- and stem-feeding parasites of Santalales untangle the footprints of feeding mode and lifestyle transitions. Genome Biology and Evolution. PMID 31845987 DOI: 10.1093/Gbe/Evz271  0.34
2019 Wang S, Li L, Li H, Sahu SK, Wang H, Xu Y, Xian W, Song B, Liang H, Cheng S, Chang Y, Song Y, Çebi Z, Wittek S, Reder T, ... ... Xu X, et al. Genomes of early-diverging streptophyte algae shed light on plant terrestrialization. Nature Plants. PMID 31844283 DOI: 10.1038/S41477-019-0560-3  0.416
2019 Cheng S, Fu Y, Zhang Y, Xian W, Wang H, Grothe B, Liu X, Xu X, Klug A, McCullagh EA. Enhancement of de novo sequencing, assembly and annotation of the Mongolian gerbil genome with transcriptome sequencing and assembly from several different tissues. Bmc Genomics. 20: 903. PMID 31775624 DOI: 10.1186/S12864-019-6276-Y  0.374
2019 Cheng S, Xian W, Fu Y, Marin B, Keller J, Wu T, Sun W, Li X, Xu Y, Zhang Y, Wittek S, Reder T, Günther G, Gontcharov A, Wang S, ... ... Xu X, et al. Genomes of Subaerial Zygnematophyceae Provide Insights into Land Plant Evolution. Cell. 179: 1057-1067.e14. PMID 31730849 DOI: 10.1016/J.Cell.2019.10.019  0.374
2019 Leng L, Sun J, Huang J, Gong F, Yang L, Zhang S, Yuan X, Fang F, Xu X, Luo Y, Bolund L, Peters BA, Lu G, Jiang T, Xu F, et al. Single-Cell Transcriptome Analysis of Uniparental Embryos Reveals Parent-of-Origin Effects on Human Preimplantation Development. Cell Stem Cell. PMID 31588047 DOI: 10.1016/J.Stem.2019.09.004  0.328
2019 Song B, Song Y, Fu Y, Kizito EB, Kamenya SN, Kabod PN, Liu H, Muthemba S, Kariba R, Njuguna J, Maina S, Stomeo F, Djikeng A, Hendre PS, Chen X, ... ... Xu X, et al. Draft genome sequence of Solanum aethiopicum provides insights into disease resistance, drought tolerance, and the evolution of the genome. Gigascience. 8. PMID 31574156 DOI: 10.1093/Gigascience/Giz115  0.422
2019 Zhao YP, Fan G, Yin PP, Sun S, Li N, Hong X, Hu G, Zhang H, Zhang FM, Han JD, Hao YJ, Xu Q, Yang X, Xia W, Chen W, ... ... Xu X, et al. Resequencing 545 ginkgo genomes across the world reveals the evolutionary history of the living fossil. Nature Communications. 10: 4201. PMID 31519986 DOI: 10.1038/S41467-019-12133-5  0.629
2019 Hong S, Liu D, Luo S, Fang W, Zhan J, Fu S, Zhang Y, Wu X, Zhou H, Chen X, Chen G, Zhang Z, Zheng Q, Li X, Chen J, ... ... Xu X, et al. The genomic landscape of Epstein-Barr virus-associated pulmonary lymphoepithelioma-like carcinoma. Nature Communications. 10: 3108. PMID 31311932 DOI: 10.1038/S41467-019-10902-W  0.364
2019 Wu T, Li L, Jiang X, Yang Y, Song Y, Chen L, Xu X, Shen Y, Gu Y. Sequencing and comparative analysis of three Chlorella genomes provide insights into strain-specific adaptation to wastewater. Scientific Reports. 9: 9514. PMID 31267025 DOI: 10.1038/S41598-019-45511-6  0.445
2019 Peng Y, Zhang Y, Gui Y, An D, Liu J, Xu X, Li Q, Wang J, Wang W, Shi C, Fan L, Lu B, Deng Y, Teng S, He Z. Elimination of a retrotransposon for quenching genome instability in modern rice. Molecular Plant. PMID 31228579 DOI: 10.1016/J.Molp.2019.06.004  0.33
2019 Dong Z, Zhao X, Li Q, Yang Z, Xi Y, Alexeev A, Shen H, Wang O, Ruan J, Ren H, Wei H, Qi X, Li J, Zhu X, Zhang Y, ... ... Xu X, et al. Development of coupling controlled polymerizations by adapter-ligation in mate-pair sequencing for detection of various genomic variants in one single assay. Dna Research : An International Journal For Rapid Publication of Reports On Genes and Genomes. PMID 31173071 DOI: 10.1093/Dnares/Dsz011  0.413
2019 Ershov NI, Mordvinov VA, Prokhortchouk EB, Pakharukova MY, Gunbin KV, Ustyantsev K, Genaev MA, Blinov AG, Mazur A, Boulygina E, Tsygankova S, Khrameeva E, Chekanov N, Fan G, Xiao A, ... ... Xu X, et al. New insights from Opisthorchis felineus genome: update on genomics of the epidemiologically important liver flukes. Bmc Genomics. 20: 399. PMID 31117933 DOI: 10.1186/S12864-019-5752-8  0.365
2019 He Y, Chang Y, Bao L, Yu M, Li R, Niu J, Fan G, Song W, Seim I, Qin Y, Li X, Liu J, Kong X, Peng M, Sun M, ... ... Xu X, et al. A chromosome-level genome of black rockfish, Sebastes schlegelii, provides insights into the evolution of live birth. Molecular Ecology Resources. PMID 31077549 DOI: 10.1111/1755-0998.13034  0.38
2019 Hendre PS, Muthemba S, Kariba R, Muchugi A, Fu Y, Chang Y, Song B, Liu H, Liu M, Liao X, Sahu SK, Wang S, Li L, Lu H, Peng S, ... ... Xu X, et al. African Orphan Crops Consortium (AOCC): status of developing genomic resources for African orphan crops. Planta. PMID 31073657 DOI: 10.1007/S00425-019-03156-9  0.408
2019 Varshney RK, Thudi M, Roorkiwal M, He W, Upadhyaya HD, Yang W, Bajaj P, Cubry P, Rathore A, Jian J, Doddamani D, Khan AW, Garg V, Chitikineni A, Xu D, ... Xu X, et al. Resequencing of 429 chickpea accessions from 45 countries provides insights into genome diversity, domestication and agronomic traits. Nature Genetics. PMID 31036963 DOI: 10.1038/S41588-019-0401-3  0.447
2019 Wang O, Chin R, Cheng X, Wu M, Mao Q, Tang J, Sun Y, Anderson E, Lam H, Chen D, Zhou Y, Wang L, Fan F, Zou Y, Xie Y, ... ... Xu X, et al. Efficient and unique co-barcoding of second-generation sequencing reads from long DNA molecules enabling cost effective and accurate sequencing, haplotyping, and de novo assembly. Genome Research. PMID 30940689 DOI: 10.1101/Gr.245126.118  0.39
2019 Lan T, Lin H, Zhu W, Tellier LCAM, Yang M, Liu X, Wang J, Wang J, Yang H, Xu X, Guo X. Correction to: Deep whole-genome sequencing of 90 Han Chinese Genomes. Gigascience. 8. PMID 30801124 DOI: 10.1093/Gigascience/Giz001  0.436
2019 Fan G, Zhang Y, Liu X, Wang J, Sun Z, Sun S, Zhang H, Chen J, Lv M, Han K, Tan X, Hu J, Guan R, Fu Y, Liu S, ... Xu X, et al. The first chromosome-level genome for a marine mammal as a resource to study ecology and evolution. Molecular Ecology Resources. PMID 30735609 DOI: 10.1111/1755-0998.13003  0.416
2019 Zou Y, Xue W, Luo G, Deng Z, Qin P, Guo R, Sun H, Xia Y, Liang S, Dai Y, Wan D, Jiang R, Su L, Feng Q, Jie Z, ... Xu X, et al. 1,520 reference genomes from cultivated human gut bacteria enable functional microbiome analyses. Nature Biotechnology. 37: 179-185. PMID 30718868 DOI: 10.1038/S41587-018-0008-8  0.435
2019 Liu H, Wei J, Yang T, Mu W, Song B, Yang T, Fu Y, Wang X, Hu G, Li W, Zhou H, Chang Y, Chen X, Chen H, Cheng L, ... Xu X, et al. Molecular digitization of a botanical garden: high-depth whole genome sequencing of 689 vascular plant species from the Ruili Botanical Garden. Gigascience. PMID 30689836 DOI: 10.1093/Gigascience/Giz007  0.404
2019 Peng L, Xing R, Liu D, Bao L, Cheng W, Wang H, Yu Y, Liu X, Jiang L, Wu Y, An Z, Liang Q, Kim RN, Shin YK, Yang H, ... ... Xu X, et al. Characterization and validation of somatic mutation spectrum to reveal heterogeneity in gastric cancer by single cell sequencing Science Bulletin. 64: 236-244. DOI: 10.1016/J.Scib.2018.12.014  0.304
2018 Gong L, Fan G, Ren Y, Chen Y, Qiu Q, Liu L, Qin Y, Liu B, Jiang L, Li H, Zeng Y, Gao Q, Zhang C, Wang Z, Jiang H, ... Xu X, et al. Chromosomal level reference genome of Tachypleus tridentatus provides insights into evolution and adaptation of horseshoe crabs. Molecular Ecology Resources. PMID 30592378 DOI: 10.1111/1755-0998.12988  0.437
2018 Møller HD, Lin L, Xiang X, Petersen TS, Huang J, Yang L, Kjeldsen E, Jensen UB, Zhang X, Liu X, Xu X, Wang J, Yang H, Church GM, Bolund L, et al. CRISPR-C: circularization of genes and chromosome by CRISPR in human cells. Nucleic Acids Research. 46: e131. PMID 30551175 DOI: 10.1093/Nar/Gky767  0.302
2018 Chang Y, Liu H, Liu M, Liao X, Sahu SK, Fu Y, Song B, Cheng S, Kariba R, Muthemba S, Hendre PS, Mayes S, Ho WK, Kendabie P, Wang S, ... Xu X, et al. The draft genomes of five agriculturally important African orphan crops. Gigascience. PMID 30535374 DOI: 10.1093/Gigascience/Giy152  0.423
2018 Bai H, Guo X, Narisu N, Lan T, Wu Q, Xing Y, Zhang Y, Bond SR, Pei Z, Zhang Y, Zhang D, Jirimutu J, Zhang D, Yang X, Morigenbatu M, ... ... Xu X, et al. Whole-genome sequencing of 175 Mongolians uncovers population-specific genetic architecture and gene flow throughout North and East Asia. Nature Genetics. PMID 30397334 DOI: 10.1038/S41588-018-0250-5  0.389
2018 Zhang P, Kang B, Xie G, Li S, Gu Y, Shen Y, Zhao X, Ma Y, Li F, Si J, Wang J, Chen J, Yang H, Xu X, Yang Y. Genomic sequencing and editing revealed the GRM8 signaling pathway as potential therapeutic targets of squamous cell lung cancer. Cancer Letters. PMID 30391781 DOI: 10.1016/J.Canlet.2018.10.035  0.377
2018 Liu S, Huang S, Chen F, Zhao L, Yuan Y, Francis SS, Fang L, Li Z, Lin L, Liu R, Zhang Y, Xu H, Li S, Zhou Y, Davies RW, ... ... Xu X, et al. Genomic Analyses from Non-invasive Prenatal Testing Reveal Genetic Associations, Patterns of Viral Infections, and Chinese Population History. Cell. 175: 347-359.e14. PMID 30290141 DOI: 10.1016/J.Cell.2018.08.016  0.354
2018 Burgarella C, Cubry P, Kane NA, Varshney RK, Mariac C, Liu X, Shi C, Thudi M, Couderc M, Xu X, Chitikineni A, Scarcelli N, Barnaud A, Rhoné B, Dupuy C, et al. A western Sahara centre of domestication inferred from pearl millet genomes. Nature Ecology & Evolution. PMID 30082736 DOI: 10.1038/S41559-018-0643-Y  0.443
2018 Li FW, Brouwer P, Carretero-Paulet L, Cheng S, de Vries J, Delaux PM, Eily A, Koppers N, Kuo LY, Li Z, Simenc M, Small I, Wafula E, Angarita S, Barker MS, ... Xu X, et al. Fern genomes elucidate land plant evolution and cyanobacterial symbioses. Nature Plants. PMID 29967517 DOI: 10.1038/S41477-018-0188-8  0.438
2018 Griesmann M, Chang Y, Liu X, Song Y, Haberer G, Crook MB, Billault-Penneteau B, Lauressergues D, Keller J, Imanishi L, Roswanjaya YP, Kohlen W, Pujic P, Battenberg K, Alloisio N, ... ... Xu X, et al. Phylogenomics reveals multiple losses of nitrogen-fixing root nodule symbiosis. Science (New York, N.Y.). PMID 29794220 DOI: 10.1126/Science.Aat1743  0.359
2018 Wu Y, Zhang Y, Hou Z, Fan G, Pi J, Sun S, Chen J, Liu H, Du X, Shen J, Hu G, Chen W, Pan A, Yin P, Chen X, ... ... Xu X, et al. Population genomic data reveal genes related to important traits of quail. Gigascience. PMID 29762663 DOI: 10.1093/Gigascience/Giy049  0.454
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