| Year |
Citation |
Score |
| 2024 |
Dunham SJB, Avelar-Barragan J, Rothman JA, Adams ED, Faraci G, Forner S, Kawauchi S, Tenner AJ, Green KN, LaFerla FM, MacGregor GR, Mapstone M, Whiteson KL. Sex-specific associations between AD genotype and the microbiome of human amyloid beta knock-in (hAβ-KI) mice. Alzheimer's & Dementia : the Journal of the Alzheimer's Association. PMID 38572865 DOI: 10.1002/alz.13794 |
0.538 |
|
| 2023 |
Rothman JA, Riis JL, Hamilton KR, Blair C, Granger DA, Whiteson KL. Oral microbial communities in children, caregivers, and associations with salivary biomeasures and environmental tobacco smoke exposure. Msystems. e0003623. PMID 37338237 DOI: 10.1128/msystems.00036-23 |
0.594 |
|
| 2023 |
Zünd M, Dunham SJB, Rothman JA, Whiteson KL. What Lies Beneath? Taking the Plunge into the Murky Waters of Phage Biology. Msystems. e0080722. PMID 36651762 DOI: 10.1128/msystems.00807-22 |
0.636 |
|
| 2022 |
Rothman JA, Saghir A, Chung SA, Boyajian N, Dinh T, Kim J, Oval J, Sharavanan V, York C, Zimmer-Faust AG, Langlois K, Steele JA, Griffith JF, Whiteson KL. Longitudinal metatranscriptomic sequencing of Southern California wastewater representing 16 million people from August 2020-21 reveals widespread transcription of antibiotic resistance genes. Water Research. 229: 119421. PMID 36455460 DOI: 10.1016/j.watres.2022.119421 |
0.651 |
|
| 2022 |
Rothman JA, Whiteson KL. Sequencing and Variant Detection of Eight Abundant Plant-Infecting Tobamoviruses across Southern California Wastewater. Microbiology Spectrum. e0305022. PMID 36374107 DOI: 10.1128/spectrum.03050-22 |
0.604 |
|
| 2022 |
Rothman JA, Saghir A, Chung SA, Boyajian N, Dinh T, Kim J, Oval J, Sharavanan V, York C, Zimmer-Faust AG, Langlois K, Steele JA, Griffith JF, Whiteson KL. Longitudinal metatranscriptomic sequencing of Southern California wastewater representing 16 million people from August 2020-21 reveals widespread transcription of antibiotic resistance genes. Biorxiv : the Preprint Server For Biology. PMID 35982656 DOI: 10.1101/2022.08.02.502560 |
0.653 |
|
| 2021 |
Rothman JA, Loveless TB, Kapcia J, Adams ED, Steele JA, Zimmer-Faust AG, Langlois K, Wanless D, Griffith M, Mao L, Chokry J, Griffith JF, Whiteson KL. RNA viromics of Southern California wastewater and detection of SARS-CoV-2 single nucleotide variants. Applied and Environmental Microbiology. AEM0144821. PMID 34550753 DOI: 10.1128/AEM.01448-21 |
0.627 |
|
| 2020 |
Gallagher T, Riedel S, Kapcia J, Caverly LJ, Carmody L, Kalikin LM, Lu J, Phan J, Gargus M, Kagawa M, Leemans SW, Rothman JA, Grun F, LiPuma JJ, Whiteson KL. LC-MS detection of antibiotic agents in sputum from persons with cystic fibrosis. Antimicrobial Agents and Chemotherapy. PMID 33139284 DOI: 10.1128/AAC.00927-20 |
0.599 |
|
| 2020 |
Rothman JA, Loveless TB, Griffith ML, Steele JA, Griffith JF, Whiteson KL. Metagenomics of Wastewater Influent from Southern California Wastewater Treatment Facilities in the Era of COVID-19. Microbiology Resource Announcements. 9. PMID 33033132 DOI: 10.1128/MRA.00907-20 |
0.622 |
|
| 2020 |
Oliver A, LaMere B, Weihe C, Wandro S, Lindsay KL, Wadhwa PD, Mills DA, Pride DT, Fiehn O, Northen T, de Raad M, Li H, Martiny JBH, Lynch S, Whiteson K. Cervicovaginal Microbiome Composition Is Associated with Metabolic Profiles in Healthy Pregnancy. Mbio. 11. PMID 32843557 DOI: 10.1128/Mbio.01851-20 |
0.362 |
|
| 2020 |
Hahn A, Whiteson K, Davis TJ, Phan J, Sami I, Koumbourlis AC, Freishtat RJ, Crandall KA, Bean HD. Longitudinal Associations of the Cystic Fibrosis Airway Microbiome and Volatile Metabolites: A Case Study. Frontiers in Cellular and Infection Microbiology. 10: 174. PMID 32411616 DOI: 10.3389/Fcimb.2020.00174 |
0.355 |
|
| 2019 |
Edwards RA, Vega AA, Norman HM, Ohaeri M, Levi K, Dinsdale EA, Cinek O, Aziz RK, McNair K, Barr JJ, Bibby K, Brouns SJJ, Cazares A, de Jonge PA, Desnues C, ... ... Whiteson KL, et al. Global phylogeography and ancient evolution of the widespread human gut virus crAssphage. Nature Microbiology. PMID 31285584 DOI: 10.1038/S41564-019-0494-6 |
0.38 |
|
| 2019 |
Gallagher T, Phan J, Oliver A, Chase AB, England WE, Wandro S, Hendrickson C, Riedel SF, Whiteson K. Cystic fibrosis-associated strain-specific adaptations and responses to pH. Journal of Bacteriology. PMID 30642989 DOI: 10.1128/Jb.00478-18 |
0.309 |
|
| 2018 |
Wandro S, Oliver A, Gallagher T, Weihe C, England W, Martiny JBH, Whiteson K. Predictable Molecular Adaptation of Coevolving and Lytic Phage EfV12-phi1. Frontiers in Microbiology. 9: 3192. PMID 30766528 DOI: 10.3389/Fmicb.2018.03192 |
0.391 |
|
| 2018 |
Roux S, Adriaenssens EM, Dutilh BE, Koonin EV, Kropinski AM, Krupovic M, Kuhn JH, Lavigne R, Brister JR, Varsani A, Amid C, Aziz RK, Bordenstein SR, Bork P, Breitbart M, ... ... Whiteson KL, et al. Minimum Information about an Uncultivated Virus Genome (MIUViG). Nature Biotechnology. PMID 30556814 DOI: 10.1038/Nbt.4306 |
0.317 |
|
| 2018 |
Gallagher T, Phan J, Whiteson K. Getting our fingers on the pulse of slow growing bacteria in hard to reach places. Journal of Bacteriology. PMID 30249702 DOI: 10.1128/Jb.00540-18 |
0.306 |
|
| 2018 |
Nusbaum DJ, Sun F, Ren J, Zhu Z, Ramsy N, Pervolarakis N, Kunde S, England W, Gao B, Fiehn O, Michail S, Whiteson K. Gut microbial and metabolomic profiles after fecal microbiota transplantation in pediatric ulcerative colitis patients. Fems Microbiology Ecology. PMID 30010747 DOI: 10.1093/Femsec/Fiy133 |
0.342 |
|
| 2018 |
Phan J, Gallagher T, Oliver A, England W, Whiteson K. Fermentation products in the cystic fibrosis airways induce aggregation and dormancy-associated expression profiles in a CF clinical isolate of Pseudomonas aeruginosa. Fems Microbiology Letters. PMID 29617986 DOI: 10.1093/Femsle/Fny082 |
0.344 |
|
| 2018 |
Nguyen CQ, Thrift WJ, Bhattacharjee A, Ranjbar S, Gallagher T, Darvishzadeh-Varcheie M, Sanderson RN, Capolino F, Whiteson K, Baldi P, Hochbaum AI, Ragan R. Longitudinal Monitoring of Biofilm Formation via Robust SERS Quantification of Pseudomonas aeruginosa-Produced Metabolite. Acs Applied Materials & Interfaces. PMID 29589446 DOI: 10.1021/Acsami.7B18592 |
0.322 |
|
| 2017 |
Whiteson K, Agrawal S, Agrawal A. Differential Responses of Human Dendritic Cells to Metabolites from the Oral/Airway Microbiome. Clinical and Experimental Immunology. PMID 28194750 DOI: 10.1111/Cei.12943 |
0.326 |
|
| 2017 |
Phan J, Meinardi S, Barletta B, Blake D, Whiteson K. Stable isotope profiles reveal active production of VOCs from human-associated microbes. Journal of Breath Research. PMID 28070022 DOI: 10.1088/1752-7163/Aa5833 |
0.377 |
|
| 2016 |
Bos LDJ, Meinardi S, Blake D, Whiteson K. Bacteria in the airways of patients with cystic fibrosis are genetically capable of producing VOCs in breath. Journal of Breath Research. 10: 47103. PMID 27991430 DOI: 10.1088/1752-7163/10/4/047103 |
0.354 |
|
| 2016 |
Quinn RA, Lim YW, Mak TD, Whiteson K, Furlan M, Conrad D, Rohwer F, Dorrestein P. Metabolomics of pulmonary exacerbations reveals the personalized nature of cystic fibrosis disease. Peerj. 4: e2174. PMID 27602256 DOI: 10.7717/Peerj.2174 |
0.336 |
|
| 2015 |
Quinn RA, Phelan VV, Whiteson KL, Garg N, Bailey BA, Lim YW, Conrad DJ, Dorrestein PC, Rohwer FL. Microbial, host and xenobiotic diversity in the cystic fibrosis sputum metabolome. The Isme Journal. PMID 26623545 DOI: 10.1038/Ismej.2015.207 |
0.351 |
|
| 2015 |
Quinn RA, Whiteson K, Lim YW, Salamon P, Bailey B, Mienardi S, Sanchez SE, Blake D, Conrad D, Rohwer F. A Winogradsky-based culture system shows an association between microbial fermentation and cystic fibrosis exacerbation. The Isme Journal. 9: 1024-38. PMID 25514533 DOI: 10.1038/Ismej.2014.234 |
0.352 |
|
| 2014 |
Whiteson KL, Lazarevic V, Tangomo-Bento M, Girard M, Maughan H, Pittet D, Francois P, Schrenzel J. Noma affected children from niger have distinct oral microbial communities based on high-throughput sequencing of 16S rRNA gene fragments. Plos Neglected Tropical Diseases. 8: e3240. PMID 25474262 DOI: 10.1371/Journal.Pntd.0003240 |
0.343 |
|
| 2014 |
Whiteson KL, Bailey B, Bergkessel M, Conrad D, Delhaes L, Felts B, Harris JK, Hunter R, Lim YW, Maughan H, Quinn R, Salamon P, Sullivan J, Wagner BD, Rainey PB. The upper respiratory tract as a microbial source for pulmonary infections in cystic fibrosis. Parallels from island biogeography. American Journal of Respiratory and Critical Care Medicine. 189: 1309-15. PMID 24702670 DOI: 10.1164/Rccm.201312-2129Pp |
0.352 |
|
| 2014 |
Quinn RA, Lim YW, Maughan H, Conrad D, Rohwer F, Whiteson KL. Biogeochemical forces shape the composition and physiology of polymicrobial communities in the cystic fibrosis lung. Mbio. 5: e00956-13. PMID 24643867 DOI: 10.1128/Mbio.00956-13 |
0.38 |
|
| 2014 |
Whiteson KL, Hernandez D, Lazarevic V, Gaia N, Farinelli L, François P, Pilo P, Frey J, Schrenzel J. A genomic perspective on a new bacterial genus and species from the Alcaligenaceae family, Basilea psittacipulmonis. Bmc Genomics. 15: 169. PMID 24581117 DOI: 10.1186/1471-2164-15-169 |
0.331 |
|
| 2014 |
Whiteson KL, Meinardi S, Lim YW, Schmieder R, Maughan H, Quinn R, Blake DR, Conrad D, Rohwer F. Breath gas metabolites and bacterial metagenomes from cystic fibrosis airways indicate active pH neutral 2,3-butanedione fermentation. The Isme Journal. 8: 1247-58. PMID 24401860 DOI: 10.1038/Ismej.2013.229 |
0.335 |
|
| 2014 |
Whiteson K, Lim YW, Quinn R, Meinardi S, Blake D, Conrad D, Rohwer F. Linking genetic potential and active metabolism in cystic fibrosis microbial communities to find biomarkers of disease state F1000research. 5. DOI: 10.7490/F1000Research.1097088.1 |
0.308 |
|
| 2013 |
Lim YW, Schmieder R, Haynes M, Furlan M, Matthews TD, Whiteson K, Poole SJ, Hayes CS, Low DA, Maughan H, Edwards R, Conrad D, Rohwer F. Mechanistic model of Rothia mucilaginosa adaptation toward persistence in the CF lung, based on a genome reconstructed from metagenomic data. Plos One. 8: e64285. PMID 23737977 DOI: 10.1371/Journal.Pone.0064285 |
0.308 |
|
| 2013 |
Barr JJ, Auro R, Furlan M, Whiteson KL, Erb ML, Pogliano J, Stotland A, Wolkowicz R, Cutting AS, Doran KS, Salamon P, Youle M, Rohwer F. Bacteriophage adhering to mucus provide a non-host-derived immunity. Proceedings of the National Academy of Sciences of the United States of America. 110: 10771-6. PMID 23690590 DOI: 10.1073/Pnas.1305923110 |
0.346 |
|
| 2013 |
Lazarevic V, Manzano S, Gaïa N, Girard M, Whiteson K, Hibbs J, François P, Gervaix A, Schrenzel J. Effects of amoxicillin treatment on the salivary microbiota in children with acute otitis media Clinical Microbiology and Infection. 19: E335-E342. PMID 23565884 DOI: 10.1111/1469-0691.12213 |
0.347 |
|
| 2012 |
Reyes A, Semenkovich NP, Whiteson K, Rohwer F, Gordon JI. Going viral: next-generation sequencing applied to phage populations in the human gut. Nature Reviews. Microbiology. 10: 607-17. PMID 22864264 DOI: 10.1038/Nrmicro2853 |
0.387 |
|
| 2011 |
Stenz L, Francois P, Whiteson K, Wolz C, Linder P, Schrenzel J. The CodY pleiotropic repressor controls virulence in gram-positive pathogens Fems Immunology and Medical Microbiology. 62: 123-139. PMID 21539625 DOI: 10.1111/J.1574-695X.2011.00812.X |
0.358 |
|
| 2010 |
Lazarevic V, Whiteson K, Hernandez D, François P, Schrenzel J. Study of inter- and intra-individual variations in the salivary microbiota Bmc Genomics. 11. PMID 20920195 DOI: 10.1186/1471-2164-11-523 |
0.395 |
|
| 2009 |
Lazarevic V, Whiteson K, Huse S, Hernandez D, Farinelli L, Østerås M, Schrenzel J, François P. Metagenomic study of the oral microbiota by Illumina high-throughput sequencing Journal of Microbiological Methods. 79: 266-271. PMID 19796657 DOI: 10.1016/J.Mimet.2009.09.012 |
0.404 |
|
| 2008 |
Whiteson KL, Rice PA. Binding and catalytic contributions to site recognition by flp recombinase. The Journal of Biological Chemistry. 283: 11414-23. PMID 18276592 DOI: 10.1074/Jbc.M800106200 |
0.514 |
|
| 2007 |
Whiteson KL, Chen Y, Chopra N, Raymond AC, Rice PA. Identification of a potential general acid/base in the reversible phosphoryl transfer reactions catalyzed by tyrosine recombinases: Flp H305. Chemistry & Biology. 14: 121-9. PMID 17317566 DOI: 10.1016/J.Chembiol.2007.01.011 |
0.496 |
|
| 2006 |
Grindley ND, Whiteson KL, Rice PA. Mechanisms of site-specific recombination. Annual Review of Biochemistry. 75: 567-605. PMID 16756503 DOI: 10.1146/Annurev.Biochem.73.011303.073908 |
0.508 |
|
| Low-probability matches (unlikely to be authored by this person) |
| 2019 |
Bru JL, Rawson B, Trinh C, Whiteson K, Høyland-Kroghsbo NM, Siryaporn A. PQS produced by the stress response repels swarms away from bacteriophage and antibiotics. Journal of Bacteriology. PMID 31451543 DOI: 10.1128/Jb.00383-19 |
0.294 |
|
| 2012 |
Bolivar I, Whiteson K, Stadelmann B, Baratti-Mayer D, Gizard Y, Mombelli A, Pittet D, Schrenzel J. Bacterial diversity in oral samples of children in Niger with acute noma, acute necrotizing gingivitis, and healthy controls Plos Neglected Tropical Diseases. 6. PMID 22413030 DOI: 10.1371/Journal.Pntd.0001556 |
0.29 |
|
| 2024 |
Kim M, Ii RCP, Shah VS, Ross M, Cormier J, Baig A, Huang CY, Brenner L, Neuringer I, Whiteson K, Harris JK, Willis AD, Lai PS. Host DNA depletion on frozen human respiratory samples enables successful metagenomic sequencing for microbiome studies. Research Square. PMID 38343829 DOI: 10.21203/rs.3.rs-3638876/v1 |
0.282 |
|
| 2018 |
Lau WL, Vaziri ND, Nunes AC, Comeau AM, Langille MG, England W, Khazaeli M, Suematsu Y, Phan J, Whiteson K. The phosphate binder ferric citrate alters the gut microbiome in rats with chronic kidney disease. The Journal of Pharmacology and Experimental Therapeutics. PMID 30287477 DOI: 10.1124/Jpet.118.251389 |
0.276 |
|
| 2015 |
Thrift W, Bhattacharjee A, Darvishzadeh-Varcheie M, Lu Y, Hochbaum A, Capolino F, Whiteson K, Ragan R. Surface enhanced Raman scattering for detection of Pseudomonas aeruginosa quorum sensing compounds Proceedings of Spie - the International Society For Optical Engineering. 9550. DOI: 10.1117/12.2188806 |
0.275 |
|
| 2020 |
Xavier JB, Young VB, Skufca J, Ginty F, Testerman T, Pearson AT, Macklin P, Mitchell A, Shmulevich I, Xie L, Caporaso JG, Crandall KA, Simone NL, Godoy-Vitorino F, Griffin TJ, ... Whiteson KL, et al. The Cancer Microbiome: Distinguishing Direct and Indirect Effects Requires a Systemic View. Trends in Cancer. 6: 192-204. PMID 32101723 DOI: 10.1016/J.Trecan.2020.01.004 |
0.264 |
|
| 2017 |
Dutilh BE, Reyes A, Hall RJ, Whiteson KL. Editorial: Virus Discovery by Metagenomics: The (Im)possibilities. Frontiers in Microbiology. 8: 1710. PMID 28943867 DOI: 10.3389/Fmicb.2017.01710 |
0.263 |
|
| 2020 |
Jeney SES, Lane F, Oliver A, Whiteson K, Dutta S. Fecal Microbiota Transplantation for the Treatment of Refractory Recurrent Urinary Tract Infection. Obstetrics and Gynecology. PMID 32925627 DOI: 10.1097/Aog.0000000000004052 |
0.262 |
|
| 2019 |
Rhoades N, Barr T, Hendrickson S, Prongay K, Haertel A, Gill L, Garzel L, Whiteson K, Slifka M, Messaoudi I. Maturation of the infant rhesus macaque gut microbiome and its role in the development of diarrheal disease. Genome Biology. 20: 173. PMID 31451108 DOI: 10.1186/S13059-019-1789-X |
0.257 |
|
| 2018 |
Nusbaum D, Pervolarakis N, Ramsy N, England W, Michail S, Whiteson K. 636 - Convergence Toward Donor Microbial and Metabolomic Profiles after Fecal Microbiota Transplantation in Pediatric Ulcerative Colitis Patients Gastroenterology. 154. DOI: 10.1016/S0016-5085(18)30873-4 |
0.249 |
|
| 2020 |
Sewall JM, Oliver A, Denaro K, Chase AB, Weihe C, Lay M, Martiny JBH, Whiteson K. Fiber Force: A Fiber Diet Intervention in an Advanced Course-Based Undergraduate Research Experience (CURE) Course. Journal of Microbiology & Biology Education. 21. PMID 32431776 DOI: 10.1128/Jmbe.V21I1.1991 |
0.243 |
|
| 2018 |
Whiteson KL. Vive la Persistence: Engineering Human Microbiomes in the 21st Century. Msystems. 3. PMID 29657964 DOI: 10.1128/mSystems.00166-17 |
0.243 |
|
| 2022 |
Wandro S, Ghatbale P, Attai H, Hendrickson C, Samillano C, Suh J, Dunham SJB, Pride DT, Whiteson K. Phage Cocktails Constrain the Growth of . Msystems. e0001922. PMID 35762793 DOI: 10.1128/msystems.00019-22 |
0.242 |
|
| 2020 |
Phan J, Ranjbar S, Kagawa M, Gargus M, Hochbaum AI, Whiteson KL. Thriving Under Stress: Outcompetes the Background Polymicrobial Community Under Treatment Conditions in a Novel Chronic Wound Model. Frontiers in Cellular and Infection Microbiology. 10: 569685. PMID 33123495 DOI: 10.3389/fcimb.2020.569685 |
0.24 |
|
| 2016 |
Quinn RA, Whiteson K, Lim YW, Zhao J, Conrad D, LiPuma JJ, Rohwer F, Widder S. Ecological networking of cystic fibrosis lung infections. Npj Biofilms and Microbiomes. 2: 4. PMID 28649398 DOI: 10.1038/s41522-016-0002-1 |
0.24 |
|
| 2022 |
Avelar-Barragan J, DeDecker L, Lu ZN, Coppedge B, Karnes WE, Whiteson KL. Distinct colon mucosa microbiomes associated with tubular adenomas and serrated polyps. Npj Biofilms and Microbiomes. 8: 69. PMID 36038569 DOI: 10.1038/s41522-022-00328-6 |
0.236 |
|
| 2022 |
Vieira J, Jesudasen S, Bringhurst L, Sui HY, McIver L, Whiteson K, Hanselmann K, O'Toole GA, Richards CJ, Sicilian L, Neuringer I, Lai PS. Supplemental Oxygen Alters the Airway Microbiome in Cystic Fibrosis. Msystems. e0036422. PMID 36000724 DOI: 10.1128/msystems.00364-22 |
0.235 |
|
| 2022 |
Phan J, Kapcia J, Rodriguez CI, Vogel VL, Cardin DB, Dunham SJB, Whiteson K. Capturing Actively Produced Microbial Volatile Organic Compounds from Human-Associated Samples with Vacuum-Assisted Sorbent Extraction. Journal of Visualized Experiments : Jove. PMID 35723496 DOI: 10.3791/62547 |
0.234 |
|
| 2018 |
Elalaoui K, Weihe C, Oliver A, Craver B, Lai HY, Brooks S, Kim D, Martiny J, Whiteson K, Fleischman A. Investigating the Role of the Gut Microbiome in the Inflammatory State of Myeloproliferative Neoplasms Blood. 132: 3051-3051. DOI: 10.1182/Blood-2018-99-109761 |
0.221 |
|
| 2024 |
Khong E, Oh JJ, Jimenez JM, Liu R, Dunham S, Monsibais A, Rhoads A, Ghatbale P, Garcia A, Cobián Güemes AG, Blanc AN, Chiu M, Kuo P, Proost M, Kline A, ... ... Whiteson K, et al. A simple solid media assay for detection of synergy between bacteriophages and antibiotics. Microbiology Spectrum. e0322123. PMID 38526142 DOI: 10.1128/spectrum.03221-23 |
0.213 |
|
| 2020 |
Martiny JBH, Whiteson KL, Bohannan BJM, David LA, Hynson NA, McFall-Ngai M, Rawls JF, Schmidt TM, Abdo Z, Blaser MJ, Bordenstein S, Bréchot C, Bull CT, Dorrestein P, Eisen JA, et al. The emergence of microbiome centres. Nature Microbiology. 5: 2-3. PMID 31857734 DOI: 10.1038/S41564-019-0644-X |
0.21 |
|
| 2023 |
Khong E, Oh J, Jimenez JM, Liu R, Dunham S, Monsibais A, Rhoads A, Ghatbale P, Garcia A, Cobián Güemes AG, Blanc AN, Chiu M, Kuo P, Proost M, Kline A, ... ... Whiteson K, et al. A simple solid media assay for detection of synergy between bacteriophages and antibiotics. Biorxiv : the Preprint Server For Biology. PMID 37662290 DOI: 10.1101/2023.08.23.554535 |
0.204 |
|
| 2018 |
Gao B, Gallagher T, Zhang Y, Elbadawi-Sidhu M, Lai Z, Fiehn O, Whiteson KL. Tracking Polymicrobial Metabolism in Cystic Fibrosis Airways: Metabolism and Physiology Are Influenced by -Derived Metabolites. Msphere. 3. PMID 29695623 DOI: 10.1128/mSphere.00151-18 |
0.193 |
|
| 2021 |
Vieira J, Gallagher T, Sui HY, Jesudasen S, Whiteson K, O'Toole GA, Hanselmann K, Lai PS. Design and Development of a Model to Study the Effect of Supplemental Oxygen on the Cystic Fibrosis Airway Microbiome. Journal of Visualized Experiments : Jove. PMID 34424248 DOI: 10.3791/62888 |
0.174 |
|
| 2017 |
Wandro S, Carmody L, Gallagher T, LiPuma JJ, Whiteson K. Making It Last: Storage Time and Temperature Have Differential Impacts on Metabolite Profiles of Airway Samples from Cystic Fibrosis Patients. Msystems. 2. PMID 29202048 DOI: 10.1128/mSystems.00100-17 |
0.171 |
|
| 2021 |
DeDecker L, Coppedge B, Avelar-Barragan J, Karnes W, Whiteson K. Microbiome distinctions between the CRC carcinogenic pathways. Gut Microbes. 13: 1854641. PMID 33446008 DOI: 10.1080/19490976.2020.1854641 |
0.167 |
|
| 2022 |
Dunham SJB, McNair KA, Adams ED, Avelar-Barragan J, Forner S, Mapstone M, Whiteson KL. Longitudinal Analysis of the Microbiome and Metabolome in the 5xfAD Mouse Model of Alzheimer's Disease. Mbio. e0179422. PMID 36468884 DOI: 10.1128/mbio.01794-22 |
0.166 |
|
| 2022 |
Oliver A, El Alaoui K, Haunschild C, Avelar-Barragan J, Mendez Luque LF, Whiteson K, Fleischman AG. Fecal Microbial Community Composition in Myeloproliferative Neoplasm Patients Is Associated with an Inflammatory State. Microbiology Spectrum. e0003222. PMID 35475626 DOI: 10.1128/spectrum.00032-22 |
0.166 |
|
| 2023 |
Green SI, Clark JR, Santos HH, Weesner KE, Salazar KC, Aslam S, Campbell WJ, Doernberg SB, Blodget E, Morris MI, Suh GA, Obeid K, Silveira FP, Filippov AA, Whiteson KL, et al. A retrospective, observational study of 12 cases of expanded access customized phage therapy: production, characteristics, and clinical outcomes. Clinical Infectious Diseases : An Official Publication of the Infectious Diseases Society of America. PMID 37279523 DOI: 10.1093/cid/ciad335 |
0.164 |
|
| 2023 |
Bru JL, Kasallis SJ, Chang R, Zhuo Q, Nguyen J, Pham P, Warren E, Whiteson K, Høyland-Kroghsbo NM, Limoli DH, Siryaporn A. The great divide: rhamnolipids mediate separation between and . Frontiers in Cellular and Infection Microbiology. 13: 1245874. PMID 37780859 DOI: 10.3389/fcimb.2023.1245874 |
0.163 |
|
| 2021 |
Jeney SES, Avelar-Barragan J, Whiteson K, Chang J, Dutta S, Lane F. Fecal Putative Uropathogen Abundance and Antibiotic Resistance Gene Carriage in Women With Refractory Recurrent Urinary Tract Infection Treated With Fecal Microbiota Transplantation. Female Pelvic Medicine & Reconstructive Surgery. PMID 34608030 DOI: 10.1097/SPV.0000000000001090 |
0.163 |
|
| 2012 |
Lazarevic V, Whiteson K, Gaïa N, Gizard Y, Hernandez D, Farinelli L, Osterås M, François P, Schrenzel J. Analysis of the salivary microbiome using culture-independent techniques. Journal of Clinical Bioinformatics. 2: 4. PMID 22300522 DOI: 10.1186/2043-9113-2-4 |
0.161 |
|
| 2012 |
Lazarevic V, Whiteson K, Gaïa N, Gizard Y, Hernandez D, Farinelli L, Osterås M, François P, Schrenzel J. Analysis of the salivary microbiome using culture-independent techniques. Journal of Clinical Bioinformatics. 2: 4. PMID 22300522 DOI: 10.1186/2043-9113-2-4 |
0.161 |
|
| 2022 |
Jiang SC, Bischel HN, Goel R, Rosso D, Sherchan S, Whiteson KL, Yan T, Solo-Gabriele HM. Integrating Virus Monitoring Strategies for Safe Non-potable Water Reuse. Water. 14. PMID 37622131 DOI: 10.3390/w14081187 |
0.159 |
|
| 2023 |
Routy B, Jackson T, Mählmann L, Baumgartner CK, Blaser M, Byrd A, Corvaia N, Couts K, Davar D, Derosa L, Hang HC, Hospers G, Isaksen M, Kroemer G, Malard F, ... ... Whiteson K, et al. Melanoma and microbiota: Current understanding and future directions. Cancer Cell. PMID 38157864 DOI: 10.1016/j.ccell.2023.12.003 |
0.155 |
|
| 2023 |
Avelar-Barragan J, Mendez Luque LF, Nguyen J, Nguyen H, Odegaard AO, Fleischman AG, Whiteson KL. Characterizing the microbiome of patients with myeloproliferative neoplasms during a Mediterranean diet intervention. Mbio. e0230823. PMID 37877698 DOI: 10.1128/mbio.02308-23 |
0.154 |
|
| 2015 |
Quinn RA, Whiteson K, Lim YW, Salamon P, Bailey B, Mienardi S, Sanchez SE, Blake D, Conrad D, Rohwer F. A Winogradsky-based culture system shows an association between microbial fermentation and cystic fibrosis exacerbation. The Isme Journal. 9: 1052. PMID 25777574 DOI: 10.1038/ismej.2014.266 |
0.146 |
|
| 2021 |
O'Toole GA, Crabbé A, Kümmerli R, LiPuma JJ, Bomberger JM, Davies JC, Limoli D, Phelan VV, Bliska JB, DePas WH, Dietrich LE, Hampton TH, Hunter R, Khursigara CM, Price-Whelan A, ... ... Whiteson K, et al. Model Systems to Study the Chronic, Polymicrobial Infections in Cystic Fibrosis: Current Approaches and Exploring Future Directions. Mbio. e0176321. PMID 34544277 DOI: 10.1128/mBio.01763-21 |
0.143 |
|
| 2018 |
Wandro S, Osborne S, Enriquez C, Bixby C, Arrieta A, Whiteson K. The Microbiome and Metabolome of Preterm Infant Stool Are Personalized and Not Driven by Health Outcomes, Including Necrotizing Enterocolitis and Late-Onset Sepsis. Msphere. 3. PMID 29875143 DOI: 10.1128/mSphere.00104-18 |
0.142 |
|
| 2021 |
Oliver A, Chase AB, Weihe C, Orchanian SB, Riedel SF, Hendrickson CL, Lay M, Sewall JM, Martiny JBH, Whiteson K. High-Fiber, Whole-Food Dietary Intervention Alters the Human Gut Microbiome but Not Fecal Short-Chain Fatty Acids. Msystems. 6. PMID 33727392 DOI: 10.1128/mSystems.00115-21 |
0.132 |
|
| 2022 |
Pfister CA, Light SH, Bohannan B, Schmidt T, Martiny A, Hynson NA, Devkota S, David L, Whiteson K. Conceptual Exchanges for Understanding Free-Living and Host-Associated Microbiomes. Msystems. e0137421. PMID 35014872 DOI: 10.1128/msystems.01374-21 |
0.131 |
|
| 2023 |
Petrisko TJ, Gargus M, Chu SH, Selvan P, Whiteson KL, Tenner AJ. Influence of complement protein C1q or complement receptor C5aR1 on gut microbiota composition in wildtype and Alzheimer's mouse models. Journal of Neuroinflammation. 20: 211. PMID 37726739 DOI: 10.1186/s12974-023-02885-9 |
0.128 |
|
| 2022 |
Kumar P, Brazel D, DeRogatis J, Valerin JBG, Whiteson K, Chow WA, Tinoco R, Moyers JT. The cure from within? a review of the microbiome and diet in melanoma. Cancer Metastasis Reviews. PMID 35474500 DOI: 10.1007/s10555-022-10029-3 |
0.125 |
|
| 2021 |
Zhang Y, Gao B, Valdiviez L, Zhu C, Gallagher T, Whiteson K, Fiehn O. Comparing Stable Isotope Enrichment by Gas Chromatography with Time-of-Flight, Quadrupole Time-of-Flight, and Quadrupole Mass Spectrometry. Analytical Chemistry. PMID 33434014 DOI: 10.1021/acs.analchem.0c04013 |
0.124 |
|
| 2021 |
Albright MBN, Louca S, Winkler DE, Feeser KL, Haig SJ, Whiteson KL, Emerson JB, Dunbar J. Solutions in microbiome engineering: prioritizing barriers to organism establishment. The Isme Journal. PMID 34420034 DOI: 10.1038/s41396-021-01088-5 |
0.116 |
|
| 2021 |
Neerincx AH, Whiteson K, Phan JL, Brinkman P, Abdel-Aziz MI, Weersink EJM, Altenburg J, Majoor CJ, Maitland-van der Zee AH, Bos LDJ. Lumacaftor/ivacaftor changes the lung microbiome and metabolome in cystic fibrosis patients. Erj Open Research. 7. PMID 33898610 DOI: 10.1183/23120541.00731-2020 |
0.099 |
|
| 2024 |
Mendez Luque LF, Avelar-Barragan J, Nguyen H, Nguyen J, Soyfer EM, Liu J, Chen JH, Mehrotra N, Huang X, Kosiorek HE, Dueck A, Himstead A, Heide E, Lem M, El Alaoui K, ... ... Whiteson KL, et al. The NUTRIENT Trial (NUTRitional Intervention among myEloproliferative Neoplasms): Results from a Randomized Phase I Pilot Study for Feasibility and Adherence. Cancer Research Communications. 4: 660-670. PMID 38391189 DOI: 10.1158/2767-9764.CRC-23-0380 |
0.062 |
|
| 2023 |
Mendez Luque LF, Avelar-Barragan J, Nguyen H, Nguyen J, Soyfer EM, Liu J, Chen JH, Mehrotra N, Kosiorek HE, Dueck A, Himstead A, Heide E, Lem M, El Alaoui K, Mas Marin E, ... ... Whiteson KL, et al. The NUTRIENT Trial (NUTRitional Intervention among myEloproliferative Neoplasms): Feasibility Phase. Medrxiv : the Preprint Server For Health Sciences. PMID 37214789 DOI: 10.1101/2023.05.09.23289740 |
0.058 |
|
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