Daphne Koller - Publications

Affiliations: 
Computer Science Stanford University, Palo Alto, CA 

117 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2015 Carithers LJ, Ardlie K, Barcus M, Branton PA, Britton A, Buia SA, Compton CC, DeLuca DS, Peter-Demchok J, Gelfand ET, Guan P, Korzeniewski GE, Lockhart NC, Rabiner CA, Rao AK, et al. A Novel Approach to High-Quality Postmortem Tissue Procurement: The GTEx Project. Biopreservation and Biobanking. 13: 311-9. PMID 26484571 DOI: 10.1089/bio.2015.0032  0.6
2015 Yang J, Huang T, Petralia F, Long Q, Zhang B, Argmann C, Zhao Y, Mobbs CV, Schadt EE, Zhu J, Tu Z. Synchronized age-related gene expression changes across multiple tissues in human and the link to complex diseases. Scientific Reports. 5: 15145. PMID 26477495 DOI: 10.1038/Srep15145  0.6
2015 Kumar MP, Turki H, Preston D, Koller D. Parameter Estimation and Energy Minimization for Region-Based Semantic Segmentation. Ieee Transactions On Pattern Analysis and Machine Intelligence. 37: 1373-86. PMID 26352446 DOI: 10.1109/Tpami.2014.2372766  1
2015 Pierson E, Koller D, Battle A, Mostafavi S, Ardlie KG, Getz G, Wright FA, Kellis M, Volpi S, Dermitzakis ET. Sharing and Specificity of Co-expression Networks across 35 Human Tissues. Plos Computational Biology. 11: e1004220. PMID 25970446 DOI: 10.1371/Journal.Pcbi.1004220  1
2015 Ardlie KG, DeLuca DS, Segrè AV, Sullivan TJ, Young TR, Gelfand ET, Trowbridge CA, Maller JB, Tukiainen T, Lek M, Ward LD, Kheradpour P, Iriarte B, Meng Y, Palmer CD, ... ... Koller D, et al. The Genotype-Tissue Expression (GTEx) pilot analysis: Multitissue gene regulation in humans Science. 348: 648-660. DOI: 10.1126/science.1262110  1
2014 Pop C, Rouskin S, Ingolia NT, Han L, Phizicky EM, Weissman JS, Koller D. Causal signals between codon bias, mRNA structure, and the efficiency of translation and elongation. Molecular Systems Biology. 10: 770. PMID 25538139 DOI: 10.15252/Msb.20145524  1
2014 Mostafavi S, Ortiz-Lopez A, Bogue MA, Hattori K, Pop C, Koller D, Mathis D, Benoist C. Variation and genetic control of gene expression in primary immunocytes across inbred mouse strains. Journal of Immunology (Baltimore, Md. : 1950). 193: 4485-96. PMID 25267973 DOI: 10.4049/Jimmunol.1401280  1
2014 Jackson KJ, Liu Y, Roskin KM, Glanville J, Hoh RA, Seo K, Marshall EL, Gurley TC, Moody MA, Haynes BF, Walter EB, Liao HX, Albrecht RA, García-Sastre A, Chaparro-Riggers J, ... ... Koller D, et al. Human responses to influenza vaccination show seroconversion signatures and convergent antibody rearrangements. Cell Host & Microbe. 16: 105-14. PMID 24981332 DOI: 10.1016/J.Chom.2014.05.013  1
2014 Costello JC, Heiser LM, Georgii E, Gönen M, Menden MP, Wang NJ, Bansal M, Ammad-ud-din M, Hintsanen P, Khan SA, Mpindi JP, Kallioniemi O, Honkela A, Aittokallio T, Wennerberg K, et al. A community effort to assess and improve drug sensitivity prediction algorithms. Nature Biotechnology. 32: 1202-12. PMID 24880487 DOI: 10.1038/nbt.2877  1
2014 Raj T, Rothamel K, Mostafavi S, Ye C, Lee MN, Replogle JM, Feng T, Lee M, Asinovski N, Frohlich I, Imboywa S, Von Korff A, Okada Y, Patsopoulos NA, Davis S, ... ... Koller D, et al. Polarization of the effects of autoimmune and neurodegenerative risk alleles in leukocytes. Science (New York, N.Y.). 344: 519-23. PMID 24786080 DOI: 10.1126/Science.1249547  1
2014 Wang C, Liu Y, Xu LT, Jackson KJ, Roskin KM, Pham TD, Laserson J, Marshall EL, Seo K, Lee JY, Furman D, Koller D, Dekker CL, Davis MM, Fire AZ, et al. Effects of aging, cytomegalovirus infection, and EBV infection on human B cell repertoires. Journal of Immunology (Baltimore, Md. : 1950). 192: 603-11. PMID 24337376 DOI: 10.4049/Jimmunol.1301384  1
2014 Mostafavi S, Battle A, Zhu X, Potash JB, Weissman MM, Shi J, Beckman K, Haudenschild C, McCormick C, Mei R, Gameroff MJ, Gindes H, Adams P, Goes FS, Mondimore FM, ... ... Koller D, et al. Type I interferon signaling genes in recurrent major depression: increased expression detected by whole-blood RNA sequencing. Molecular Psychiatry. 19: 1267-74. PMID 24296977 DOI: 10.1038/Mp.2013.161  1
2014 Battle A, Mostafavi S, Zhu X, Potash JB, Weissman MM, McCormick C, Haudenschild CD, Beckman KB, Shi J, Mei R, Urban AE, Montgomery SB, Levinson DF, Koller D. Characterizing the genetic basis of transcriptome diversity through RNA-sequencing of 922 individuals. Genome Research. 24: 14-24. PMID 24092820 DOI: 10.1101/Gr.155192.113  1
2014 Furman D, Jojic V, Kidd B, Shen-Orr S, Price J, Jarrell J, Tse T, Huang H, Lund P, Maecker HT, Utz PJ, Dekker CL, Koller D, Davis MM. Apoptosis and other immune biomarkers predict influenza vaccine responsiveness (Molecular Systems Biology (2013) 9 (659) DOI: 10.1038/msb.2013.15) Molecular Systems Biology. 10. DOI: 10.15252/Msb.20145632  1
2014 Blikstein P, Worsley M, Piech C, Sahami M, Cooper S, Koller D. Programming Pluralism: Using Learning Analytics to Detect Patterns in the Learning of Computer Programming Journal of the Learning Sciences. 23: 561-599. DOI: 10.1080/10508406.2014.954750  1
2013 Mostafavi S, Battle A, Zhu X, Urban AE, Levinson D, Montgomery SB, Koller D. Normalizing RNA-sequencing data by modeling hidden covariates with prior knowledge. Plos One. 8: e68141. PMID 23874524 DOI: 10.1371/Journal.Pone.0068141  1
2013 Parameswaran P, Liu Y, Roskin KM, Jackson KKL, Dixit VP, Lee JY, Artiles KL, Zompi S, Vargas MJ, Simen BB, Hanczaruk B, McGowan KR, Tariq MA, Pourmand N, Koller D, et al. Convergent antibody signatures in human dengue Cell Host and Microbe. 13: 691-700. PMID 23768493 DOI: 10.1016/J.Chom.2013.05.008  1
2013 Lonsdale J, Thomas J, Salvatore M, Phillips R, Lo E, Shad S, Hasz R, Walters G, Garcia F, Young N, Foster B, Moser M, Karasik E, Gillard B, Ramsey K, ... ... Koller D, et al. The Genotype-Tissue Expression (GTEx) project Nature Genetics. 45: 580-585. PMID 23715323 DOI: 10.1038/Ng.2653  1
2013 Mingueneau M, Kreslavsky T, Gray D, Heng T, Cruse R, Ericson J, Bendall S, Spitzer MH, Nolan GP, Kobayashi K, von Boehmer H, Mathis D, Benoist C, Best AJ, ... ... Koller D, et al. The transcriptional landscape of αβ T cell differentiation. Nature Immunology. 14: 619-32. PMID 23644507 DOI: 10.1038/Ni.2590  1
2013 Jojic V, Shay T, Sylvia K, Zuk O, Sun X, Kang J, Regev A, Koller D, Best AJ, Knell J, Goldrath A, Joic V, Koller D, Shay T, et al. Identification of transcriptional regulators in the mouse immune system. Nature Immunology. 14: 633-43. PMID 23624555 DOI: 10.1038/Ni.2587  1
2013 Furman D, Jojic V, Kidd B, Shen-Orr S, Price J, Jarrell J, Tse T, Huang H, Lund P, Maecker HT, Utz PJ, Dekker CL, Koller D, Davis MM. Apoptosis and other immune biomarkers predict influenza vaccine responsiveness. Molecular Systems Biology. 9: 659. PMID 23591775 DOI: 10.1038/Msb.2013.15  1
2013 Shay T, Jojic V, Zuk O, Rothamel K, Puyraimond-Zemmour D, Feng T, Wakamatsu E, Benoist C, Koller D, Regev A. Conservation and divergence in the transcriptional programs of the human and mouse immune systems Proceedings of the National Academy of Sciences of the United States of America. 110: 2946-2951. PMID 23382184 DOI: 10.1073/Pnas.1222738110  1
2013 Kulkarni C, Wei KP, Le H, Chia D, Papadopoulos K, Cheng J, Koller D, Klemmer SR. Peer and self assessment in massive online classes Acm Transactions On Computer-Human Interaction. 20. DOI: 10.1145/2505057  1
2013 Fast E, Lee C, Aiken A, Bernstein MS, Koller D, Smith E. Crowd-scale interactive formal reasoning and analytics Uist 2013 - Proceedings of the 26th Annual Acm Symposium On User Interface Software and Technology. 363-372. DOI: 10.1145/2501988.2502028  1
2013 Wang H, Gould S, Koller D. Discriminative learning with latent variables for cluttered indoor scene understanding Communications of the Acm. 56: 92-99. DOI: 10.1145/2436256.2436276  1
2013 Tang K, Yao B, Fei-Fei L, Koller D. Combining the right features for complex event recognition Proceedings of the Ieee International Conference On Computer Vision. 2696-2703. DOI: 10.1109/ICCV.2013.335  1
2013 Bowen WG, Delbanco A, Gardner H, Hennessy JL, Koller D. Higher education in the digital age Higher Education in the Digital Age 1
2013 Wang H, Koller D. A fast and exact energy minimization algorithm for cycle MRFs 30th International Conference On Machine Learning, Icml 2013. 1227-1235.  1
2013 Wang H, Koller D. Subproblem-tree calibration: A unified approach to max-product message passing 30th International Conference On Machine Learning, Icml 2013. 849-857.  1
2012 Donner Y, Feng T, Benoist C, Koller D. Imputing gene expression from selectively reduced probe sets Nature Methods. 9: 1120-1125. PMID 23064520 DOI: 10.1038/Nmeth.2207  1
2012 Gautiar EL, Shay T, Miller J, Greter M, Jakubzick C, Ivanov S, Helft J, Chow A, Elpek KG, Gordonov S, Mazloom AR, Ma'Ayan A, Chua WJ, Hansen TH, Turley SJ, ... ... Koller D, et al. Gene-expression profiles and transcriptional regulatory pathways that underlie the identity and diversity of mouse tissue macrophages Nature Immunology. 13: 1118-1128. PMID 23023392 DOI: 10.1038/Ni.2419  1
2012 Bezman NA, Kim CC, Sun JC, Min-Oo G, Hendricks DW, Kamimura Y, Best JA, Goldrath AW, Lanier LL. Molecular definition of the identity and activation of natural killer cells. Nature Immunology. 13: 1000-9. PMID 22902830 DOI: 10.1038/Ni.2395  1
2012 Miller JC, Brown BD, Shay T, Gautier EL, Jojic V, Cohain A, Pandey G, Leboeuf M, Elpek KG, Helft J, Hashimoto D, Chow A, Price J, Greter M, Bogunovic M, et al. Deciphering the transcriptional network of the dendritic cell lineage. Nature Immunology. 13: 888-99. PMID 22797772 DOI: 10.1038/Ni.2370  1
2012 Narayan K, Sylvia KE, Malhotra N, Yin CC, Martens G, Vallerskog T, Kornfeld H, Xiong N, Cohen NR, Brenner MB, Berg LJ, Kang J. Intrathymic programming of effector fates in three molecularly distinct γδ T cell subtypes. Nature Immunology. 13: 511-8. PMID 22473038 DOI: 10.1038/Ni.2247  1
2012 Malhotra D, Fletcher AL, Astarita J, Lukacs-Kornek V, Tayalia P, Gonzalez SF, Elpek KG, Chang SK, Knoblich K, Hemler ME, Brenner MB, Carroll MC, Mooney DJ, Turley SJ. Transcriptional profiling of stroma from inflamed and resting lymph nodes defines immunological hallmarks. Nature Immunology. 13: 499-510. PMID 22466668 DOI: 10.1038/Ni.2262  1
2012 Stark M, Krause J, Pepik B, Meger D, Little JJ, Schiele B, Koller D. Fine-grained categorization for 3D scene understanding Bmvc 2012 - Electronic Proceedings of the British Machine Vision Conference 2012. DOI: 10.5244/C.26.36  1
2012 Kalogerakis E, Chaudhuri S, Koller D, Koltun V. A probabilistic model for component-based shape synthesis Acm Transactions On Graphics. 31. DOI: 10.1145/2185520.2185551  1
2012 Piech C, Sahami M, Koller D, Cooper S, Blikstein P. Modeling how students learn to program Sigcse'12 - Proceedings of the 43rd Acm Technical Symposium On Computer Science Education. 153-158. DOI: 10.1145/2157136.2157182  1
2012 Packer B, Saenko K, Koller D. A combined pose, object, and feature model for action understanding Proceedings of the Ieee Computer Society Conference On Computer Vision and Pattern Recognition. 1378-1385. DOI: 10.1109/CVPR.2012.6247824  1
2012 Tang K, Fei-Fei L, Koller D. Learning latent temporal structure for complex event detection Proceedings of the Ieee Computer Society Conference On Computer Vision and Pattern Recognition. 1250-1257. DOI: 10.1109/CVPR.2012.6247808  1
2012 Boxem M, Maliga Z, Klitgord N, Li N, Lemmens I, Mana M, Lichtervelde LD, Mul JD, Peut DVD, Devos M, Simonis N, Yildirim MA, Cokol M, Kao HL, Smet ASD, ... ... Koller D, et al. Erratum: A protein domain-based interactome network for C. elegans early embryogenesis (Cell (2008) 134 (534-545)) Cell. 151. DOI: 10.1016/J.Cell.2012.11.042  1
2012 Ganapathi V, Plagemann C, Koller D, Thrun S. Real-time human pose tracking from range data Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 7577: 738-751. DOI: 10.1007/978-3-642-33783-3_53  1
2012 Gao T, Stark M, Koller D. What makes a good detector? Structured priors for learning from few examples Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 7576: 354-367. DOI: 10.1007/978-3-642-33715-4_26  1
2012 Tang K, Ramanathan V, Fei-Fei L, Koller D. Shifting weights: Adapting object detectors from image to video Advances in Neural Information Processing Systems. 1: 638-646.  1
2012 Kumar MP, Packer B, Koller D. Modeling latent variable uncertainty for loss-based learning Proceedings of the 29th International Conference On Machine Learning, Icml 2012. 1: 465-472.  1
2012 Amitha Perera AG, Oh S, Pandey M, Ma T, Hoogs A, Vahdat A, Cannons K, Hajimirsadeghi H, Mori G, McCloskey S, Miller B, Venkatesha S, Davalos P, Das P, Xu C, ... ... Koller D, et al. TRECVID 2012 GENIE: Multimedia event detection and recounting 2012 Trec Video Retrieval Evaluation Notebook Papers 1
2011 Beck AH, Sangoi AR, Leung S, Marinelli RJ, Nielsen TO, van de Vijver MJ, West RB, van de Rijn M, Koller D. Systematic analysis of breast cancer morphology uncovers stromal features associated with survival. Science Translational Medicine. 3: 108ra113. PMID 22072638 DOI: 10.1126/Scitranslmed.3002564  1
2011 Painter MW, Davis S, Hardy RR, Mathis D, Benoist C. Transcriptomes of the B and T lineages compared by multiplatform microarray profiling. Journal of Immunology (Baltimore, Md. : 1950). 186: 3047-57. PMID 21307297 DOI: 10.4049/Jimmunol.1002695  1
2011 Saria S, Duchi A, Koller D. Discovering deformable motifs in continuous time series data Ijcai International Joint Conference On Artificial Intelligence. 1465-1471. DOI: 10.5591/978-1-57735-516-8/IJCAI11-247  1
2011 Gao T, Koller D. Discriminative learning of relaxed hierarchy for large-scale visual recognition Proceedings of the Ieee International Conference On Computer Vision. 2072-2079. DOI: 10.1109/ICCV.2011.6126481  1
2011 Kumar MP, Turki H, Preston D, Koller D. Learning specific-class segmentation from diverse data Proceedings of the Ieee International Conference On Computer Vision. 1800-1807. DOI: 10.1109/ICCV.2011.6126446  1
2011 Wang H, Koller D. Multi-level inference by relaxed dual decomposition for human pose segmentation Proceedings of the Ieee Computer Society Conference On Computer Vision and Pattern Recognition. 2433-2440. DOI: 10.1109/CVPR.2011.5995722  1
2011 Gao T, Packer B, Koller D. A segmentation-aware object detection model with occlusion handling Proceedings of the Ieee Computer Society Conference On Computer Vision and Pattern Recognition. 1361-1368. DOI: 10.1109/CVPR.2011.5995623  1
2011 Jojic V, Saria S, Koller D. Convex envelopes of complexity controlling penalties: The case against premature envelopment Journal of Machine Learning Research. 15: 399-406.  1
2011 Gao T, Koller D. Active classification based on value of classifier Advances in Neural Information Processing Systems 24: 25th Annual Conference On Neural Information Processing Systems 2011, Nips 2011 1
2011 Gao T, Koller D. Multiclass boosting with hinge loss based on output coding Proceedings of the 28th International Conference On Machine Learning, Icml 2011. 569-576.  1
2010 Battle A, Jonikas MC, Walter P, Weissman JS, Koller D. Automated identification of pathways from quantitative genetic interaction data. Molecular Systems Biology. 6: 379. PMID 20531408 DOI: 10.1038/Msb.2010.27  1
2010 Hillenmeyer ME, Ericson E, Davis RW, Nislow C, Koller D, Giaever G. Systematic analysis of genome-wide fitness data in yeast reveals novel gene function and drug action. Genome Biology. 11: R30. PMID 20226027 DOI: 10.1186/Gb-2010-11-3-R30  1
2010 Plagemann C, Ganapathi V, Koller D, Thrun S. Real-time identification and localization of body parts from depth images Proceedings - Ieee International Conference On Robotics and Automation. 3108-3113. DOI: 10.1109/ROBOT.2010.5509559  1
2010 Ganapathi V, Plagemann C, Koller D, Thrun S. Real time motion capture using a single time-of-flight camera Proceedings of the Ieee Computer Society Conference On Computer Vision and Pattern Recognition. 755-762. DOI: 10.1109/CVPR.2010.5540141  1
2010 Packer B, Gould S, Koller D. A unified contour-pixel model for figure-ground segmentation Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 6315: 338-351. DOI: 10.1007/978-3-642-15555-0_25  1
2009 Gentles AJ, Alizadeh AA, Lee SI, Myklebust JH, Shachaf CM, Shahbaba B, Levy R, Koller D, Plevritis SK. A pluripotency signature predicts histologic transformation and influences survival in follicular lymphoma patients. Blood. 114: 3158-66. PMID 19636063 DOI: 10.1182/Blood-2009-02-202465  1
2009 Chechik G, Koller D. Timing of gene expression responses to environmental changes. Journal of Computational Biology : a Journal of Computational Molecular Cell Biology. 16: 279-90. PMID 19193146 DOI: 10.1089/Cmb.2008.13Tt  1
2009 Lee SI, Dudley AM, Drubin D, Silver PA, Krogan NJ, Pe'er D, Koller D. Learning a prior on regulatory potential from eQTL data. Plos Genetics. 5: e1000358. PMID 19180192 DOI: 10.1371/Journal.Pgen.1000358  1
2009 Wang H, Kakaradov B, Collins SR, Karotki L, Fiedler D, Shales M, Shokat KM, Walther TC, Krogan NJ, Koller D. A complex-based reconstruction of the Saccharomyces cerevisiae interactome. Molecular & Cellular Proteomics : McP. 8: 1361-81. PMID 19176519 DOI: 10.1074/Mcp.M800490-Mcp200  1
2008 Chechik G, Oh E, Rando O, Weissman J, Regev A, Koller D. Activity motifs reveal principles of timing in transcriptional control of the yeast metabolic network. Nature Biotechnology. 26: 1251-9. PMID 18953355 DOI: 10.1038/Nbt.1499  1
2008 Heng TS, Painter MW. The Immunological Genome Project: networks of gene expression in immune cells. Nature Immunology. 9: 1091-4. PMID 18800157 DOI: 10.1038/Ni1008-1091  1
2008 Boxem M, Maliga Z, Klitgord N, Li N, Lemmens I, Mana M, de Lichtervelde L, Mul JD, van de Peut D, Devos M, Simonis N, Yildirim MA, Cokol M, Kao HL, de Smet AS, ... ... Koller D, et al. A protein domain-based interactome network for C. elegans early embryogenesis. Cell. 134: 534-45. PMID 18692475 DOI: 10.1016/J.Cell.2008.07.009  1
2008 Hillenmeyer ME, Fung E, Wildenhain J, Pierce SE, Hoon S, Lee W, Proctor M, St Onge RP, Tyers M, Koller D, Altman RB, Davis RW, Nislow C, Giaever G. The chemical genomic portrait of yeast: uncovering a phenotype for all genes. Science (New York, N.Y.). 320: 362-5. PMID 18420932 DOI: 10.1126/Science.1150021  1
2008 Chechik G, Heitz G, Elidan G, Abbeel P, Koller D. Max-margin classification of data with absent features Journal of Machine Learning Research. 9: 1-21.  1
2007 Stranger BE, Nica AC, Forrest MS, Dimas A, Bird CP, Beazley C, Ingle CE, Dunning M, Flicek P, Koller D, Montgomery S, Tavaré S, Deloukas P, Dermitzakis ET. Population genomics of human gene expression. Nature Genetics. 39: 1217-24. PMID 17873874 DOI: 10.1038/Ng2142  1
2007 Wang H, Segal E, Ben-Hur A, Li QR, Vidal M, Koller D. InSite: a computational method for identifying protein-protein interaction binding sites on a proteome-wide scale. Genome Biology. 8: R192. PMID 17868464 DOI: 10.1186/Gb-2007-8-9-R192  1
2007 Chechik G, Heitz G, Elidan G, Abbeel P, Koller D. Max-margin classification of incomplete data Advances in Neural Information Processing Systems. 233-240.  1
2006 Lee SI, Pe'er D, Dudley AM, Church GM, Koller D. Identifying regulatory mechanisms using individual variation reveals key role for chromatin modification. Proceedings of the National Academy of Sciences of the United States of America. 103: 14062-7. PMID 16968785 DOI: 10.1073/Pnas.0601852103  1
2006 Raina R, Ng AY, Koller D. Constructing informative priors using transfer learning Acm International Conference Proceeding Series. 148: 713-720. DOI: 10.1145/1143844.1143934  1
2006 Rodgers J, Anguelov D, Pang HC, Koller D. Object pose detection in range scan data Proceedings of the Ieee Computer Society Conference On Computer Vision and Pattern Recognition. 2: 2445-2452. DOI: 10.1109/CVPR.2006.212  1
2005 Battle A, Segal E, Koller D. Probabilistic discovery of overlapping cellular processes and their regulation. Journal of Computational Biology : a Journal of Computational Molecular Cell Biology. 12: 909-27. PMID 16201912 DOI: 10.1089/Cmb.2005.12.909  1
2005 Segal E, Friedman N, Kaminski N, Regev A, Koller D. From signatures to models: understanding cancer using microarrays. Nature Genetics. 37: S38-45. PMID 15920529 DOI: 10.1038/Ng1561  1
2005 Anguelov D, Srinivasan P, Koller D, Thrun S, Rodgers J, Davis J. SCAPE: Shape Completion and Animation of People Acm Transactions On Graphics. 24: 408-416. DOI: 10.1145/1073204.1073207  1
2005 Anguelov D, Taskar B, Chatalbashev V, Koller D, Gupta D, Heitz G, Ng A. Discriminative learning of Markov Random fields for segmentation of 3D scan data Proceedings of the Ieee Computer Society Conference On Computer Vision and Pattern Recognition. 2: 169-176. DOI: 10.1109/CVPR.2005.133  1
2004 Marion RM, Regev A, Segal E, Barash Y, Koller D, Friedman N, O'Shea EK. Sfp1 is a stress- and nutrient-sensitive regulator of ribosomal protein gene expression. Proceedings of the National Academy of Sciences of the United States of America. 101: 14315-22. PMID 15353587 DOI: 10.1073/Pnas.0405353101  1
2004 Thrun S, Liu Y, Koller D, Ng AY, Ghahramani Z, Durrant-Whyte H. Simultaneous localization and mapping with sparse extended information filters International Journal of Robotics Research. 23: 693-716. DOI: 10.1177/0278364904045479  1
2004 Anguelov D, Koller D, Parker E, Thrun S. Detecting and modeling doors with mobile robots Proceedings - Ieee International Conference On Robotics and Automation. 2004: 3777-3784.  1
2003 Stuart JM, Segal E, Koller D, Kim SK. A gene-coexpression network for global discovery of conserved genetic modules. Science (New York, N.Y.). 302: 249-55. PMID 12934013 DOI: 10.1126/Science.1087447  1
2003 Segal E, Yelensky R, Koller D. Genome-wide discovery of transcriptional modules from DNA sequence and gene expression. Bioinformatics (Oxford, England). 19: i273-82. PMID 12855470 DOI: 10.1093/Bioinformatics/Btg1038  1
2003 Segal E, Wang H, Koller D. Discovering molecular pathways from protein interaction and gene expression data. Bioinformatics (Oxford, England). 19: i264-71. PMID 12855469 DOI: 10.1093/Bioinformatics/Btg1037  1
2003 Segal E, Shapira M, Regev A, Pe'er D, Botstein D, Koller D, Friedman N. Module networks: identifying regulatory modules and their condition-specific regulators from gene expression data. Nature Genetics. 34: 166-76. PMID 12740579 DOI: 10.1038/Ng1165  1
2003 Segal E, Battle A, Koller D. Decomposing gene expression into cellular processes. Pacific Symposium On Biocomputing. Pacific Symposium On Biocomputing. 89-100. PMID 12603020  1
2003 Friedman N, Koller D. Being Bayesian about network structure. A Bayesian approach to structure discovery in Bayesian networks Machine Learning. 50: 95-125. DOI: 10.1023/A:1020249912095  1
2002 Tong S, Koller D. Support vector machine active learning with applications to text classification Journal of Machine Learning Research. 2: 45-66. DOI: 10.1162/153244302760185243  1
2002 Segal E, Koller D. Probabilistic hierarchical clustering for biological data Proceedings of the Annual International Conference On Computational Molecular Biology, Recomb. 273-280.  1
2002 Segal E, Barash Y, Simon I, Friedman N, Koller D. From promoter sequence to expression: A probabilistic framework Proceedings of the Annual International Conference On Computational Molecular Biology, Recomb. 263-272.  1
2001 Segal E, Taskar B, Gasch A, Friedman N, Koller D. Rich probabilistic models for gene expression. Bioinformatics (Oxford, England). 17: S243-52. PMID 11473015 DOI: 10.1093/Bioinformatics/17.Suppl_1.S243  1
2001 Getoor L, Taskar B, Koller D. Selectivity estimation using probabilistic models Proceedings of the Acm Sigmod International Conference On Management of Data. 461-472.  1
1999 Boyen X, Koller D. Exploiting the architecture of dynamic systems Proceedings of the National Conference On Artificial Intelligence. 313-320.  1
1998 Friedman N, Koller D, Pfeffer A. Structured representation of complex stochastic systems Proceedings of the National Conference On Artificial Intelligence. 157-164.  1
1998 Koller D, Pfeffer A. Probabilistic frame-based systems Proceedings of the National Conference On Artificial Intelligence. 580-587.  1
1998 Koller D. Structured probabilistic models: Bayesian networks and beyond Innovative Applications of Artificial Intelligence - Conference Proceedings. 1210-1211.  1
1997 Koller D, Levy A, Pfeffer A. P-CLASSIC: a tractable probabilistic description logic Proceedings of the National Conference On Artificial Intelligence. 390-397.  1
1997 Koller D, McAllester D, Pfeffer A. Effective Bayesian inference for stochastic programs Proceedings of the National Conference On Artificial Intelligence. 740-747.  1
1996 Grove AJ, Halpern JY, Koller D. Asymptotic conditional probabilities: The non-unary case Journal of Symbolic Logic. 61: 250-276. DOI: 10.2307/2275609  1
1996 Grove AJ, Halpern JY, Koller D. Asymptotic conditional probabilities: The unary case Siam Journal On Computing. 25: 1-51. DOI: 10.1137/S0097539793257034  1
1996 Bacchus F, Grove AJ, Halpern JY, Koller D. From statistical knowledge bases to degrees of belief Artificial Intelligence. 87: 75-143. DOI: 10.1016/S0004-3702(96)00003-3  1
1996 Koller D, Megiddo N. Finding mixed strategies with small supports in extensive form games International Journal of Game Theory. 25: 73-92. DOI: 10.1007/Bf01254386  1
1996 Friedman N, Halpern JY, Koller D. First-order conditional logic revisited Proceedings of the National Conference On Artificial Intelligence. 2: 1305-1312.  1
1996 Koller D, Halpern JY. Irrelevance and conditioning in first-order probabilistic logic Proceedings of the National Conference On Artificial Intelligence. 1: 569-576.  1
1995 Glesner S, Koller D. Constructing flexible dynamic belief networks from first-order probabilistic knowledge bases Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 946: 217-226.  1
1995 Feigenbaum J, Koller D, Shor P. Game-theoretic classification of interactive complexity classes Proceedings of the Ieee Annual Structure in Complexity Theory Conference. 227-237.  1
1994 Bacchus F, Grove AJ, Halpern JY, Koller D. Forming beliefs about a changing world Proceedings of the National Conference On Artificial Intelligence. 1: 222-229.  1
1994 Koller D, Megiddo N, von Stengel B. Fast algorithms for finding randomized strategies in game trees Conference Proceedings of the Annual Acm Symposium On Theory of Computing. 750-759.  1
1993 Koller D, Megiddo N. Constructing small sample spaces satisfying given constraints Conference Proceedings of the Annual Acm Symposium On Theory of Computing. 268-277. DOI: 10.1137/S0895480192228140  1
1993 Karger DR, Koller D, Phillips SJ. Finding the hidden path: time bounds for all-pairs shortest paths Siam Journal On Computing. 22: 1199-1217. DOI: 10.1137/0222071  1
1992 Grove AJ, Halpern JY, Koller D. Random worlds and maximum entropy Proceedings - Symposium On Logic in Computer Science. 22-33. DOI: 10.1613/Jair.61  1
1992 Koller D, Megiddo N. The complexity of two-person zero-sum games in extensive form Games and Economic Behavior. 4: 528-552. DOI: 10.1016/0899-8256(92)90035-Q  1
1992 Bacchus F, Grove A, Halpern JY, Koller D. From statistics to beliefs Proceedings Tenth National Conference On Artificial Intelligence. 602-608.  1
1992 Grove AJ, Halpern JY, Koller D. Asymptotic conditional probabilities for first-order logic Conference Proceedings of the Annual Acm Symposium On Theory of Computing. 294-305.  1
1991 Bar-Noy A, Dolev D, Koller D, Peleg D. Fault-tolerant critical section management in asynchronous environments Information and Computation. 95: 1-20. DOI: 10.1016/0890-5401(91)90014-S  1
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