David Low - Publications

Affiliations: 
University of California, Santa Barbara, Santa Barbara, CA, United States 

55 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Wäneskog M, Halvorsen T, Filek K, Xu F, Hammarlöf DL, Hayes CS, Braaten BA, Low DA, Poole SJ, Koskiniemi S. EC93 deploys two plasmid-encoded class I contact-dependent growth inhibition systems for antagonistic bacterial interactions. Microbial Genomics. PMID 33646095 DOI: 10.1099/mgen.0.000534  0.76
2021 Jones AM, Virtanen P, Hammarlöf D, Allen WJ, Collinson I, Hayes CS, Low DA, Koskiniemi S. Genetic Evidence for SecY Translocon-Mediated Import of Two Contact-Dependent Growth Inhibition (CDI) Toxins. Mbio. 12. PMID 33531386 DOI: 10.1128/mBio.03367-20  0.68
2020 Donato SL, Beck CM, Garza-Sánchez F, Jensen SJ, Ruhe ZC, Cunningham DA, Singleton I, Low DA, Hayes CS. The β-encapsulation cage of rearrangement hotspot (Rhs) effectors is required for type VI secretion. Proceedings of the National Academy of Sciences of the United States of America. PMID 33323487 DOI: 10.1073/pnas.1919350117  0.68
2020 Ruhe ZC, Low DA, Hayes CS. Polymorphic Toxins and Their Immunity Proteins: Diversity, Evolution, and Mechanisms of Delivery. Annual Review of Microbiology. PMID 32680451 DOI: 10.1146/annurev-micro-020518-115638  0.68
2018 Ruhe ZC, Subramanian P, Song K, Nguyen JY, Stevens TA, Low DA, Jensen GJ, Hayes CS. Programmed Secretion Arrest and Receptor-Triggered Toxin Export during Antibacterial Contact-Dependent Growth Inhibition. Cell. 175: 921-933.e14. PMID 30388452 DOI: 10.1016/j.cell.2018.10.033  0.68
2018 Michalska K, Nhan DQ, Willett JLE, Stols LM, Eschenfeldt WH, Jones AM, Nguyen JY, Koskiniemi S, Low DA, Goulding CW, Joachimiak A, Hayes CS. Functional plasticity of antibacterial EndoU toxins. Molecular Microbiology. PMID 29923643 DOI: 10.1111/mmi.14007  0.68
2017 Jones AM, Low DA, Hayes CS. Can't you hear me knocking: contact-dependent competition and cooperation in bacteria. Emerging Topics in Life Sciences. 1: 75-83. PMID 29085916 DOI: 10.1042/ETLS20160019  0.68
2017 Michalska K, Gucinski GC, Garza-Sánchez F, Johnson PM, Stols LM, Eschenfeldt WH, Babnigg G, Low DA, Goulding CW, Joachimiak A, Hayes CS. Structure of a novel antibacterial toxin that exploits elongation factor Tu to cleave specific transfer RNAs. Nucleic Acids Research. 45: 10306-10320. PMID 28973472 DOI: 10.1093/nar/gkx700  0.68
2017 Ruhe ZC, Nguyen JY, Xiong J, Koskiniemi S, Beck CM, Perkins BR, Low DA, Hayes CS. CdiA Effectors Use Modular Receptor-Binding Domains To Recognize Target Bacteria. Mbio. 8. PMID 28351921 DOI: 10.1128/mBio.00290-17  0.68
2017 Jones AM, Garza-Sánchez F, So J, Hayes CS, Low DA. Activation of contact-dependent antibacterial tRNase toxins by translation elongation factors. Proceedings of the National Academy of Sciences of the United States of America. PMID 28223500 DOI: 10.1073/pnas.1619273114  0.68
2016 Beck CM, Willett JL, Cunningham DA, Kim JJ, Low DA, Hayes CS. CdiA Effectors from Uropathogenic Escherichia coli Use Heterotrimeric Osmoporins as Receptors to Recognize Target Bacteria. Plos Pathogens. 12: e1005925. PMID 27723824 DOI: 10.1371/journal.ppat.1005925  0.68
2016 Johnson PM, Beck CM, Morse RP, Garza-Sánchez F, Low DA, Hayes CS, Goulding CW. Unraveling the essential role of CysK in CDI toxin activation. Proceedings of the National Academy of Sciences of the United States of America. PMID 27531961 DOI: 10.1073/pnas.1607112113  0.76
2016 Ruhe ZC, Nguyen JY, Chen AJ, Leung NY, Hayes CS, Low DA. CDI Systems Are Stably Maintained by a Cell-Contact Mediated Surveillance Mechanism. Plos Genetics. 12: e1006145. PMID 27355474 DOI: 10.1371/journal.pgen.1006145  0.68
2015 Ruhe ZC, Hayes CS, Low DA. Measuring Cell-Cell Binding Using Flow-Cytometry. Methods in Molecular Biology (Clifton, N.J.). 1329: 127-36. PMID 26427680 DOI: 10.1007/978-1-4939-2871-2_9  0.68
2015 Willett JL, Ruhe ZC, Goulding CW, Low DA, Hayes CS. Contact-dependent growth inhibition (CDI) and CdiB/CdiA two-partner secretion proteins. Journal of Molecular Biology. PMID 26388411 DOI: 10.1016/j.jmb.2015.09.010  0.68
2015 Willett JL, Gucinski GC, Fatherree JP, Low DA, Hayes CS. Contact-dependent growth inhibition toxins exploit multiple independent cell-entry pathways. Proceedings of the National Academy of Sciences of the United States of America. 112: 11341-6. PMID 26305955 DOI: 10.1073/pnas.1512124112  0.68
2015 Ruhe ZC, Townsley L, Wallace AB, King A, Van der Woude MW, Low DA, Yildiz FH, Hayes CS. CdiA promotes receptor-independent intercellular adhesion. Molecular Microbiology. PMID 26135212 DOI: 10.1111/mmi.13114  0.68
2015 Ngamdee W, Tandhavanant S, Wikraiphat C, Reamtong O, Wuthiekanun V, Salje J, Low DA, Peacock SJ, Chantratita N. Competition between Burkholderia pseudomallei and B. thailandensis. Bmc Microbiology. 15: 56. PMID 25879538 DOI: 10.1186/s12866-015-0395-7  0.76
2015 Koskiniemi S, Garza-Sánchez F, Edman N, Chaudhuri S, Poole SJ, Manoil C, Hayes CS, Low DA. Genetic analysis of the CDI pathway from Burkholderia pseudomallei 1026b. Plos One. 10: e0120265. PMID 25786241 DOI: 10.1371/journal.pone.0120265  0.68
2015 Koskiniemi S, Garza-Sánchez F, Edman N, Chaudhuri S, Poole SJ, Manoil C, Hayes CS, Low DA. Genetic analysis of the CDI pathway from Burkholderia pseudomallei 1026b Plos One. 10. DOI: 10.1371/journal.pone.0120265  0.76
2014 Ruhe ZC, Nguyen JY, Beck CM, Low DA, Hayes CS. The proton-motive force is required for translocation of CDI toxins across the inner membrane of target bacteria. Molecular Microbiology. 94: 466-81. PMID 25174572 DOI: 10.1111/mmi.12779  0.76
2014 Beck CM, Diner EJ, Kim JJ, Low DA, Hayes CS. The F pilus mediates a novel pathway of CDI toxin import. Molecular Microbiology. 93: 276-90. PMID 24889811 DOI: 10.1111/mmi.12658  0.76
2014 Koskiniemi S, Garza-Sánchez F, Sandegren L, Webb JS, Braaten BA, Poole SJ, Andersson DI, Hayes CS, Low DA. Selection of orphan Rhs toxin expression in evolved Salmonella enterica serovar Typhimurium. Plos Genetics. 10: e1004255. PMID 24675981 DOI: 10.1371/journal.pgen.1004255  0.76
2014 Beck CM, Morse RP, Cunningham DA, Iniguez A, Low DA, Goulding CW, Hayes CS. CdiA from Enterobacter cloacae delivers a toxic ribosomal RNase into target bacteria. Structure (London, England : 1993). 22: 707-18. PMID 24657090 DOI: 10.1016/j.str.2014.02.012  0.76
2014 Whitney JC, Beck CM, Goo YA, Russell AB, Harding BN, De Leon JA, Cunningham DA, Tran BQ, Low DA, Goodlett DR, Hayes CS, Mougous JD. Genetically distinct pathways guide effector export through the type VI secretion system. Molecular Microbiology. 92: 529-42. PMID 24589350 DOI: 10.1111/mmi.12571  0.76
2014 Hayes CS, Koskiniemi S, Ruhe ZC, Poole SJ, Low DA. Mechanisms and biological roles of contact-dependent growth inhibition systems. Cold Spring Harbor Perspectives in Medicine. 4. PMID 24492845 DOI: 10.1101/cshperspect.a010025  0.76
2013 Ruhe ZC, Wallace AB, Low DA, Hayes CS. Receptor polymorphism restricts contact-dependent growth inhibition to members of the same species. Mbio. 4. PMID 23882017 DOI: 10.1128/mBio.00480-13  0.76
2013 Lim YW, Schmieder R, Haynes M, Furlan M, Matthews TD, Whiteson K, Poole SJ, Hayes CS, Low DA, Maughan H, Edwards R, Conrad D, Rohwer F. Mechanistic model of Rothia mucilaginosa adaptation toward persistence in the CF lung, based on a genome reconstructed from metagenomic data. Plos One. 8: e64285. PMID 23737977 DOI: 10.1371/journal.pone.0064285  0.76
2013 Koskiniemi S, Lamoureux JG, Nikolakakis KC, t'Kint de Roodenbeke C, Kaplan MD, Low DA, Hayes CS. Rhs proteins from diverse bacteria mediate intercellular competition. Proceedings of the National Academy of Sciences of the United States of America. 110: 7032-7. PMID 23572593 DOI: 10.1073/pnas.1300627110  0.76
2013 Ruhe ZC, Low DA, Hayes CS. Bacterial contact-dependent growth inhibition. Trends in Microbiology. 21: 230-7. PMID 23473845 DOI: 10.1016/j.tim.2013.02.003  0.76
2013 Webb JS, Nikolakakis KC, Willett JL, Aoki SK, Hayes CS, Low DA. Delivery of CdiA nuclease toxins into target cells during contact-dependent growth inhibition. Plos One. 8: e57609. PMID 23469034 DOI: 10.1371/journal.pone.0057609  0.76
2012 Morse RP, Nikolakakis KC, Willett JL, Gerrick E, Low DA, Hayes CS, Goulding CW. Structural basis of toxicity and immunity in contact-dependent growth inhibition (CDI) systems. Proceedings of the National Academy of Sciences of the United States of America. 109: 21480-5. PMID 23236156 DOI: 10.1073/pnas.1216238110  0.76
2012 Charkowski A, Blanco C, Condemine G, Expert D, Franza T, Hayes C, Hugouvieux-Cotte-Pattat N, López Solanilla E, Low D, Moleleki L, Pirhonen M, Pitman A, Perna N, Reverchon S, Rodríguez Palenzuela P, et al. The role of secretion systems and small molecules in soft-rot Enterobacteriaceae pathogenicity. Annual Review of Phytopathology. 50: 425-49. PMID 22702350 DOI: 10.1146/annurev-phyto-081211-173013  0.76
2012 Nikolakakis K, Amber S, Wilbur JS, Diner EJ, Aoki SK, Poole SJ, Tuanyok A, Keim PS, Peacock S, Hayes CS, Low DA. The toxin/immunity network of Burkholderia pseudomallei contact-dependent growth inhibition (CDI) systems. Molecular Microbiology. 84: 516-29. PMID 22435733 DOI: 10.1111/j.1365-2958.2012.08039.x  0.76
2012 Diner EJ, Beck CM, Webb JS, Low DA, Hayes CS. Identification of a target cell permissive factor required for contact-dependent growth inhibition (CDI). Genes & Development. 26: 515-25. PMID 22333533 DOI: 10.1101/gad.182345.111  0.76
2012 Holberger LE, Garza-Sánchez F, Lamoureux J, Low DA, Hayes CS. A novel family of toxin/antitoxin proteins in Bacillus species. Febs Letters. 586: 132-6. PMID 22200572 DOI: 10.1016/j.febslet.2011.12.020  0.76
2011 Poole SJ, Diner EJ, Aoki SK, Braaten BA, t'Kint de Roodenbeke C, Low DA, Hayes CS. Identification of functional toxin/immunity genes linked to contact-dependent growth inhibition (CDI) and rearrangement hotspot (Rhs) systems. Plos Genetics. 7: e1002217. PMID 21829394 DOI: 10.1371/journal.pgen.1002217  0.76
2011 Aoki SK, Poole SJ, Hayes CS, Low DA. Toxin on a stick: modular CDI toxin delivery systems play roles in bacterial competition. Virulence. 2: 356-9. PMID 21705856 DOI: 10.4161/viru.2.4.16463  0.76
2010 Aoki SK, Diner EJ, de Roodenbeke CT, Burgess BR, Poole SJ, Braaten BA, Jones AM, Webb JS, Hayes CS, Cotter PA, Low DA. A widespread family of polymorphic contact-dependent toxin delivery systems in bacteria. Nature. 468: 439-42. PMID 21085179 DOI: 10.1038/nature09490  0.76
2010 Hayes CS, Aoki SK, Low DA. Bacterial contact-dependent delivery systems. Annual Review of Genetics. 44: 71-90. PMID 21047256 DOI: 10.1146/annurev.genet.42.110807.091449  0.76
2009 Hayes CS, Low DA. Signals of growth regulation in bacteria. Current Opinion in Microbiology. 12: 667-73. PMID 19854099 DOI: 10.1016/j.mib.2009.09.006  0.76
2009 Aoki SK, Webb JS, Braaten BA, Low DA. Contact-dependent growth inhibition causes reversible metabolic downregulation in Escherichia coli. Journal of Bacteriology. 191: 1777-86. PMID 19124575 DOI: 10.1128/JB.01437-08  0.76
2008 Aoki SK, Malinverni JC, Jacoby K, Thomas B, Pamma R, Trinh BN, Remers S, Webb J, Braaten BA, Silhavy TJ, Low DA. Contact-dependent growth inhibition requires the essential outer membrane protein BamA (YaeT) as the receptor and the inner membrane transport protein AcrB. Molecular Microbiology. 70: 323-40. PMID 18761695 DOI: 10.1111/j.1365-2958.2008.06404.x  0.76
2005 Aoki SK, Pamma R, Hernday AD, Bickham JE, Braaten BA, Low DA. Contact-dependent inhibition of growth in Escherichia coli. Science (New York, N.Y.). 309: 1245-8. PMID 16109881 DOI: 10.1126/science.1115109  0.76
2004 Hernday AD, Braaten BA, Broitman-Maduro G, Engelberts P, Low DA. Regulation of the pap epigenetic switch by CpxAR: phosphorylated CpxR inhibits transition to the phase ON state by competition with Lrp. Molecular Cell. 16: 537-47. PMID 15546614 DOI: 10.1016/j.molcel.2004.10.020  0.76
2004 Hernday A, Braaten B, Low D. The intricate workings of a bacterial epigenetic switch Advances in Experimental Medicine and Biology. 547: 83-89. PMID 15230094 DOI: 10.1007/978-1-4419-8861-4_7  0.76
2003 Hernday AD, Braaten BA, Low DA. The mechanism by which DNA adenine methylase and PapI activate the pap epigenetic switch. Molecular Cell. 12: 947-57. PMID 14580345 DOI: 10.1016/S1097-2765(03)00383-6  0.76
2002 Hernday A, Krabbe M, Braaten B, Low D. Self-perpetuating epigenetic pili switches in bacteria Proceedings of the National Academy of Sciences of the United States of America. 99: 16470-16476. PMID 12202745 DOI: 10.1073/pnas.182427199  0.76
2002 Julio SM, Heithoff DM, Sinsheimer RL, Low DA, Mahan MJ. DNA adenine methylase overproduction in Yersinia pseudotuberculosis alters YopE expression and secretion and host immune responses to infection. Infection and Immunity. 70: 1006-9. PMID 11796641 DOI: 10.1128/IAI.70.2.1006-1009.2002  0.76
2001 Julio SM, Heithoff DM, Provenzano D, Klose KE, Sinsheimer RL, Low DA, Mahan MJ. DNA adenine methylase is essential for viability and plays a role in the pathogenesis of Yersinia pseudotuberculosis and Vibrio cholerae. Infection and Immunity. 69: 7610-5. PMID 11705940 DOI: 10.1128/IAI.69.12.7610-7615.2001  0.76
2001 Low DA, Weyand NJ, Mahan MJ. Roles of DNA adenine methylation in regulating bacterial gene expression and virulence Infection and Immunity. 69: 7197-7204. PMID 11705888 DOI: 10.1128/IAI.69.12.7197-7204.2001  0.76
2001 Low DA, Mahan MJ. Editorial overview: Techniques hosting an infection: The complex interplay between microbes and their hosts Current Opinion in Microbiology. 4: 235-236. DOI: 10.1016/S1369-5274(00)00196-X  0.76
2000 Mahan MJ, Heithoff DM, Sinsheimer RL, Low DA. Assessment of bacterial pathogenesis by analysis of gene expression in the host. Annual Review of Genetics. 34: 139-164. PMID 11092824 DOI: 10.1146/annurev.genet.34.1.139  0.76
2000 Heithoff DM, Sinsheimer RL, Low DA, Mahan MJ. In vivo gene expression and the adaptive response: from pathogenesis to vaccines and antimicrobials. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 355: 633-42. PMID 10874736 DOI: 10.1098/rstb.2000.0604  0.76
2000 Johnson JR, O'Bryan TT, Low DA, Ling G, Delavari P, Fasching C, Russo TA, Carlino U, Stell AL. Evidence of commonality between canine and human extraintestinal pathogenic Escherichia coli strains that express papG allele III Infection and Immunity. 68: 3327-3336. PMID 10816481 DOI: 10.1128/IAI.68.6.3327-3336.2000  0.76
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