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M Saleet Jafri - Publications

Affiliations: 
Bioinformatics and Computational Biology George Mason University, Washington, DC 
Area:
Bioinformatics
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61 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Alvarez JAE, Jafri MS, Ullah A. Local Control Model of a Human Ventricular Myocyte: An Exploration of Frequency-Dependent Changes and Calcium Sparks. Biomolecules. 13. PMID 37627324 DOI: 10.3390/biom13081259  0.524
2022 Paudel R, Jafri MS, Ullah A. The Role of Ca Sparks in Force Frequency Relationships in Guinea Pig Ventricular Myocytes. Biomolecules. 12. PMID 36358926 DOI: 10.3390/biom12111577  0.487
2022 Kumar R, Jafri MS. Computational Modeling of Mitochondria to Understand the Dynamics of Oxidative Stress. Methods in Molecular Biology (Clifton, N.J.). 2497: 363-422. PMID 35771458 DOI: 10.1007/978-1-0716-2309-1_27  0.515
2022 Ullah A, Hoang-Trong MT, Lederer WJ, Winslow RL, Jafri MS. Critical Requirements for the Initiation of a Cardiac Arrhythmia in Rat Ventricle: How Many Myocytes? Cells. 11. PMID 35741007 DOI: 10.3390/cells11121878  0.463
2021 Hoang-Trong TM, Ullah A, Lederer WJ, Jafri MS. A Stochastic Spatiotemporal Model of Rat Ventricular Myocyte Calcium Dynamics Demonstrated Necessary Features for Calcium Wave Propagation. Membranes. 11. PMID 34940490 DOI: 10.3390/membranes11120989  0.481
2021 Hoang-Trong MT, Ullah A, Lederer WJ, Jafri MS. Cardiac Alternans Occurs through the Synergy of Voltage- and Calcium-Dependent Mechanisms. Membranes. 11. PMID 34677560 DOI: 10.3390/membranes11100794  0.441
2021 Limbu S, Prosser BL, Lederer WJ, Ward CW, Jafri MS. X-ROS Signaling Depends on Length-Dependent Calcium Buffering by Troponin. Cells. 10. PMID 34068012 DOI: 10.3390/cells10051189  0.315
2020 Yang L, Dedkova EN, Allen PD, Jafri MS, Fomina AF. T lymphocytes from malignant hyperthermia-susceptible mice display aberrations in intracellular calcium signaling and mitochondrial function. Cell Calcium. 93: 102325. PMID 33310301 DOI: 10.1016/j.ceca.2020.102325  0.41
2020 Yang PC, Jafri MS. Ca signaling in T lymphocytes: the interplay of the endoplasmic reticulum, mitochondria, membrane potential, and CRAC channels on transcription factor activation. Heliyon. 6: e03526. PMID 32181396 DOI: 10.1016/J.Heliyon.2020.E03526  0.685
2019 Afzal N, Mannella CA, Lederer WJ, Jafri MS. Cardiac Calcium Signaling and Mitochondrial Metabolic Function Biophysical Journal. 116: 270a. DOI: 10.1016/J.Bpj.2018.11.1463  0.372
2017 Limbu S, Prosser BL, Lederer WJ, Jafri MS. The Interplay between Length-Dependent Calcium Affinity of Troponin and X-ROS Signaling on Myoplasmic Calcium Levels in Heart Biophysical Journal. 112: 95a. DOI: 10.1016/J.Bpj.2016.11.554  0.363
2017 Afzal N, Lederer WJ, Jafri MS. Mitochondrial Permeability Transition Pore and Number of Openings Biophysical Journal. 112: 440a. DOI: 10.1016/J.Bpj.2016.11.2350  0.429
2016 Wescott AP, Jafri MS, Lederer WJ, Williams GS. Ryanodine receptor sensitivity governs the stability and synchrony of local calcium release during cardiac excitation-contraction coupling. Journal of Molecular and Cellular Cardiology. PMID 26827896 DOI: 10.1016/J.Bpj.2015.11.581  0.599
2015 Yang PC, Jafri MS. The Phase Lag between Agonist-Induced Oscillatory Ca(2+) and IP3 Signals Does Not Imply Causality (December 2015). Calcium Signaling (Santa Clara, Calif.). 2: 1-10. PMID 27218121  0.661
2015 Hoang-Trong TM, Ullah A, Jafri MS. Calcium Sparks in the Heart: Dynamics and Regulation. Research and Reports in Biology. 6: 203-214. PMID 27212876 DOI: 10.2147/RRB.S61495  0.529
2015 Limbu S, Hoang-Trong TM, Prosser BL, Lederer WJ, Jafri MS. Modeling Local X-ROS and Calcium Signaling in the Heart. Biophysical Journal. 109: 2037-50. PMID 26588563 DOI: 10.1016/J.Bpj.2015.09.031  0.559
2015 Macquaide N, Tuan HT, Hotta J, Sempels W, Lenaerts I, Holemans P, Hofkens J, Jafri MS, Willems R, Sipido KR. Ryanodine receptor cluster fragmentation and redistribution in persistent atrial fibrillation enhance calcium release. Cardiovascular Research. 108: 387-98. PMID 26490742 DOI: 10.1093/Cvr/Cvv231  0.402
2015 Shukla S, Lederer WJ, Jafri MS. Analysis of ATP Production Efficiency of Beat-To-Beat Calcium Fluctuations in Cardiac Mitochondria Biophysical Journal. 108: 109a. DOI: 10.1016/J.Bpj.2014.11.617  0.559
2015 Hoang-Trong MT, Lederer WJ, Jafri MS. Cardiac Alternans Occurs through the Synergy of Voltage- and Calcium-Dependent Mechanisms Biophysical Journal. 108: 263a. DOI: 10.1016/J.Bpj.2014.11.1453  0.527
2014 Walker MA, Williams GS, Kohl T, Lehnart SE, Jafri MS, Greenstein JL, Lederer WJ, Winslow RL. Superresolution modeling of calcium release in the heart. Biophysical Journal. 107: 3018-29. PMID 25517166 DOI: 10.1016/J.Bpj.2014.11.003  0.602
2014 Jafri MS, Kumar R. Modeling mitochondrial function and its role in disease. Progress in Molecular Biology and Translational Science. 123: 103-25. PMID 24560142 DOI: 10.1016/B978-0-12-397897-4.00001-2  0.549
2014 Ullah A, Hoang-Trong TM, Williams GS, Lederer JW, Jafri MS. A Small Number of Cells is Sufficient to Trigger a Cardiac Arrhythmia: Stochastic Computational Studies Biophysical Journal. 106: 112a. DOI: 10.1016/J.Bpj.2013.11.683  0.479
2014 Limbu S, Hoang-Trong TM, Prosser BL, Williams GS, Lederer WJ, Jafri MS. Mechanisms of Stretch-Activated Reactive Oxygen Modulation of Excitation-Contraction Coupling: Computational Studies Biophysical Journal. 106: 732a. DOI: 10.1016/J.Bpj.2013.11.4038  0.475
2014 Ullah A, Hoang Trong MT, Williams GS, Winslow RL, Lederer WJ, Jafri MS. Critical Requirements for the Initiation of a Cardiac Arrhythmia in Heart: Cell Number Biophysical Journal. 106: 431a. DOI: 10.1016/J.Bpj.2013.11.2427  0.324
2014 Williams GS, Wescott AP, Lederer W, Jafri MS. Dynamics of Calcium Sparks and SR Calcium Leak During Excitation-Contraction Coupling in Mouse Heart Cells Biophysical Journal. 106: 320a-321a. DOI: 10.1016/J.Bpj.2013.11.1850  0.61
2013 Mannella CA, Lederer WJ, Jafri MS. The connection between inner membrane topology and mitochondrial function. Journal of Molecular and Cellular Cardiology. 62: 51-7. PMID 23672826 DOI: 10.1016/J.Yjmcc.2013.05.001  0.373
2013 Wagner E, Kohl T, Tuan HTM, Westphal V, Parlitz U, Luther S, Hell SW, Jafri MS, Lederer WJ, Lehnart SE. Best Basic Science abstract Europace. 15: ii223-ii223. DOI: 10.1093/Europace/Eut179  0.434
2013 Lehnart SE, Wagner E, Kohl T, Westphal V, Parlitz U, Luther S, Hell SW, Jafri MS, Lederer WJ. Proliferative membrane changes of T-tubules and cell-wide network changes during cardiac remodeling with orphaning of Ca2+ release sites are a general mechanism of heart failure European Heart Journal. 34: 34-34. DOI: 10.1093/Eurheartj/Eht307.34  0.309
2013 Kumar R, Jafri MS. Computational Analysis of Reactive Oxygen Species Generation by Mitochondria Resulting from Substrate Manipulation Biophysical Journal. 104: 305a. DOI: 10.1016/J.Bpj.2012.11.1696  0.555
2013 Kumar R, Jafri MS. Ionic Regulation of Mitochondrial ROS Dynamics: A Computational Modeling Study Biophysical Journal. 104: 305a. DOI: 10.1016/J.Bpj.2012.11.1695  0.647
2012 Jafri MS. Models of excitation-contraction coupling in cardiac ventricular myocytes. Methods in Molecular Biology (Clifton, N.J.). 910: 309-35. PMID 22821602 DOI: 10.1007/978-1-61779-965-5_14  0.389
2012 Wagner E, Lauterbach MA, Kohl T, Westphal V, Williams GS, Steinbrecher JH, Streich JH, Korff B, Tuan HT, Hagen B, Luther S, Hasenfuss G, Parlitz U, Jafri MS, Hell SW, et al. Stimulated emission depletion live-cell super-resolution imaging shows proliferative remodeling of T-tubule membrane structures after myocardial infarction. Circulation Research. 111: 402-14. PMID 22723297 DOI: 10.1161/Circresaha.112.274530  0.392
2012 Kohl T, Parlitz U, Lauterbach M, Minh Tuan H, Williams GS, Westphal V, Jafri MS, Lederer W, Luther S, Hell SW, Lehnart SE. STED Nanoscopy of Cardiac RyR2 Clusters and Sub-Structure Analysis After Myocardial Infarction Biophysical Journal. 102: 305a. DOI: 10.1016/J.Bpj.2011.11.1683  0.327
2012 Wagner E, Lauterbach M, Kohl T, Westphal V, Williams GS, Steinbrecher JH, Streich J, Tuan HM, Hagen B, Luther S, Parlitz U, Jafri MS, Hell SW, Lederer W, Lehnart SE. Live Cell Super-Resolution Imaging of Transverse Membrane Tubules in Heart Failure Biophysical Journal. 102: 223a-224a. DOI: 10.1016/J.Bpj.2011.11.1227  0.464
2011 Tuan HT, Williams GS, Chikando AC, Sobie EA, Lederer WJ, Jafri MS. Stochastic simulation of cardiac ventricular myocyte calcium dynamics and waves. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 2011: 4677-80. PMID 22255381 DOI: 10.1109/IEMBS.2011.6091158  0.699
2011 Williams GS, Chikando AC, Tuan HT, Sobie EA, Lederer WJ, Jafri MS. Dynamics of calcium sparks and calcium leak in the heart. Biophysical Journal. 101: 1287-96. PMID 21943409 DOI: 10.1016/J.Bpj.2011.07.021  0.771
2011 Williams GS, Chikando AC, Lederer WJ, Sobie EA, Tuan HM, Jafri MS. Ca2+ Leak and Ca2+ Sparks in Mammalian Heart: Insights from a Computational Model Biophysical Journal. 100: 557a. DOI: 10.1016/J.Bpj.2010.12.3238  0.772
2011 Jafri MS, Lederer WJ, Williams GS, Greenstein JL, Winslow RL. Modeling the Mechanisms of Calcium-Mediated Cardiac Arrhythmias Biophysical Journal. 100: 556a-557a. DOI: 10.1016/J.Bpj.2010.12.3236  0.424
2011 Kumar R, Jafri MS. Mechanism of Reactive Oxygen Species Generation in Cardiac Mitochondria a Computational Approach Biophysical Journal. 100: 460a. DOI: 10.1016/J.Bpj.2010.12.2707  0.587
2010 Ramay HR, Jafri MS, Lederer WJ, Sobie EA. Predicting local SR Ca(2+) dynamics during Ca(2+) wave propagation in ventricular myocytes. Biophysical Journal. 98: 2515-23. PMID 20513395 DOI: 10.1016/J.Bpj.2010.02.038  0.749
2010 Williams GS, Smith GD, Sobie EA, Jafri MS. Models of cardiac excitation-contraction coupling in ventricular myocytes. Mathematical Biosciences. 226: 1-15. PMID 20346962 DOI: 10.1016/J.Mbs.2010.03.005  0.386
2009 Williams GS, Huertas MA, Sobie EA, Smith GD, Jafri MS. A Local Control Model for Cardiac Excitation-Contraction Coupling in Rat Ventricular Myocytes: Insights into Dynamic Phenomena involving Calcium Release Biophysical Journal. 96: 518a. DOI: 10.1016/J.Bpj.2008.12.2667  0.566
2008 Williams GS, Huertas MA, Sobie EA, Jafri MS, Smith GD. Moment closure for local control models of calcium-induced calcium release in cardiac myocytes. Biophysical Journal. 95: 1689-703. PMID 18487291 DOI: 10.1529/Biophysj.107.125948  0.576
2007 Nguyen MH, Dudycha SJ, Jafri MS. Effect of Ca2+ on cardiac mitochondrial energy production is modulated by Na+ and H+ dynamics. American Journal of Physiology. Cell Physiology. 292: C2004-20. PMID 17344315 DOI: 10.1152/Ajpcell.00271.2006  0.443
2007 Williams GS, Huertas MA, Sobie EA, Jafri MS, Smith GD. A probability density approach to modeling local control of calcium-induced calcium release in cardiac myocytes. Biophysical Journal. 92: 2311-28. PMID 17237200 DOI: 10.1529/Biophysj.106.099861  0.564
2006 Fisher WG, Yang PC, Medikonduri RK, Jafri MS. NFAT and NFkappaB activation in T lymphocytes: a model of differential activation of gene expression. Annals of Biomedical Engineering. 34: 1712-28. PMID 17031595 DOI: 10.1007/S10439-006-9179-4  0.639
2006 Jafri MS, Kotulska M. Modeling the mechanism of metabolic oscillations in ischemic cardiac myocytes. Journal of Theoretical Biology. 242: 801-817. PMID 16814324 DOI: 10.1016/J.Jtbi.2006.05.007  0.382
2005 Nguyen MH, Jafri MS. Mitochondrial calcium signaling and energy metabolism. Annals of the New York Academy of Sciences. 1047: 127-37. PMID 16093491 DOI: 10.1196/Annals.1341.012  0.579
2003 Zhang H, Noble D, Cannell M, Orchard CH, Lancaster M, Jones SA, Boyett MR, Holden AV, Jafri MS, Sobie EA, Lederer WJ, Demir SS, Michailova A, Delprincipe F, Egger M, et al. Dynamics of cardiac intracellular Ca2+ handling - From experiments to virtual cells International Journal of Bifurcation and Chaos in Applied Sciences and Engineering. 13: 3535-3560. DOI: 10.1142/S0218127403008843  0.407
2002 Sobie EA, Dilly KW, dos Santos Cruz J, Lederer WJ, Jafri MS. Termination of cardiac Ca(2+) sparks: an investigative mathematical model of calcium-induced calcium release. Biophysical Journal. 83: 59-78. PMID 12080100 DOI: 10.1016/S0006-3495(02)75149-7  0.593
2001 Rice JJ, Jafri MS. Modelling calcium handling in cardiac cells Philosophical Transactions of the Royal Society a: Mathematical, Physical and Engineering Sciences. 359: 1143-1157. DOI: 10.1098/rsta.2001.0822  0.354
2000 Rice JJ, Jafri MS, Winslow RL. Modeling short-term interval-force relations in cardiac muscle. American Journal of Physiology. Heart and Circulatory Physiology. 278: H913-31. PMID 10710361 DOI: 10.1152/Ajpheart.2000.278.3.H913  0.545
1999 Rice JJ, Jafri MS, Winslow RL. Modeling gain and gradedness of Ca2+ release in the functional unit of the cardiac diadic space. Biophysical Journal. 77: 1871-84. PMID 10512809 DOI: 10.1016/S0006-3495(99)77030-X  0.571
1999 Haddock PS, Coetzee WA, Cho E, Porter L, Katoh H, Bers DM, Jafri MS, Artman M. Subcellular [Ca2+]i gradients during excitation-contraction coupling in newborn rabbit ventricular myocytes. Circulation Research. 85: 415-27. PMID 10473671 DOI: 10.1161/01.Res.85.5.415  0.554
1999 Irvine LA, Jafri MS, Winslow RL. Cardiac sodium channel Markov model with temperature dependence and recovery from inactivation. Biophysical Journal. 76: 1868-85. PMID 10096885 DOI: 10.1016/S0006-3495(99)77346-7  0.344
1998 Jafri MS, Rice JJ, Winslow RL. Cardiac Ca2+ dynamics: the roles of ryanodine receptor adaptation and sarcoplasmic reticulum load. Biophysical Journal. 74: 1149-68. PMID 9512016 DOI: 10.1016/S0006-3495(98)77832-4  0.583
1997 Jafri MS, Keizer J. Agonist-induced calcium waves in oscillatory cells: a biological example of Burgers' equation. Bulletin of Mathematical Biology. 59: 1125-44. PMID 9358737 DOI: 10.1016/S0092-8240(97)00073-6  0.45
1997 Cohen AS, Moore KA, Bangalore R, Jafri MS, Weinreich D, Kao JP. Ca(2+)-induced Ca2+ release mediates Ca2+ transients evoked by single action potentials in rabbit vagal afferent neurones. The Journal of Physiology. 499: 315-28. PMID 9080362 DOI: 10.1113/Jphysiol.1997.Sp021929  0.407
1995 Jafri MS, Keizer J. On the roles of Ca2+ diffusion, Ca2+ buffers, and the endoplasmic reticulum in IP3-induced Ca2+ waves. Biophysical Journal. 69: 2139-53. PMID 8580358 DOI: 10.1016/S0006-3495(95)80088-3  0.42
1994 Jafri MS, Gillo B. A membrane potential model with counterions for cytosolic calcium oscillations. Cell Calcium. 16: 9-19. PMID 7954710 DOI: 10.1016/S0143-4160(05)80003-X  0.356
1994 Jafri MS, Keizer J. Diffusion of inositol 1,4,5-trisphosphate but not Ca2+ is necessary for a class of inositol 1,4,5-trisphosphate-induced Ca2+ waves. Proceedings of the National Academy of Sciences of the United States of America. 91: 9485-9. PMID 7937794 DOI: 10.1073/Pnas.91.20.9485  0.365
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