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Li-Wei Chang, Ph.D. - Publications

Affiliations: 
2006 Washington University, Saint Louis, St. Louis, MO 
Area:
Bioinformatics
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25 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2015 Koues OI, Kowalewski RA, Chang LW, Pyfrom SC, Schmidt JA, Luo H, Sandoval LE, Hughes TB, Bednarski JJ, Cashen AF, Payton JE, Oltz EM. Enhancer sequence variants and transcription-factor deregulation synergize to construct pathogenic regulatory circuits in B-cell lymphoma. Immunity. 42: 186-98. PMID 25607463 DOI: 10.1016/J.Immuni.2014.12.021  0.42
2015 Luo J, Chang L, Tao Y, Hoog J, Leung S, Nielsen TO, Ellis MJ. Abstract P5-10-02: A copy number aberration driven endocrine response gene signature stratifies risk in estrogen receptor positive breast cancer Cancer Research. 75. DOI: 10.1158/1538-7445.Sabcs14-P5-10-02  0.346
2013 McAlinden A, Varghese N, Wirthlin L, Chang LW. Differentially expressed microRNAs in chondrocytes from distinct regions of developing human cartilage. Plos One. 8: e75012. PMID 24040378 DOI: 10.1371/Journal.Pone.0075012  0.338
2013 Chang LW, Viader A, Varghese N, Payton JE, Milbrandt J, Nagarajan R. An integrated approach to characterize transcription factor and microRNA regulatory networks involved in Schwann cell response to peripheral nerve injury. Bmc Genomics. 14: 84. PMID 23387820 DOI: 10.1186/1471-2164-14-84  0.459
2012 Payton JE, Koues OI, Kowalewski R, Schmidt JA, Chang L, Cashen A, Bartlett NL, Oltz EM. Defining the Malignant Epigenome in Non-Hodgkin Lymphoma Blood. 120: 524-524. DOI: 10.1182/Blood.V120.21.524.524  0.478
2011 Viader A, Chang LW, Fahrner T, Nagarajan R, Milbrandt J. MicroRNAs modulate Schwann cell response to nerve injury by reinforcing transcriptional silencing of dedifferentiation-related genes. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 31: 17358-69. PMID 22131398 DOI: 10.1523/Jneurosci.3931-11.2011  0.33
2011 Jones EA, Lopez-Anido C, Srinivasan R, Krueger C, Chang LW, Nagarajan R, Svaren J. Regulation of the PMP22 gene through an intronic enhancer. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 31: 4242-50. PMID 21411665 DOI: 10.1523/Jneurosci.5893-10.2011  0.47
2010 Jang SW, Srinivasan R, Jones EA, Sun G, Keles S, Krueger C, Chang LW, Nagarajan R, Svaren J. Locus-wide identification of Egr2/Krox20 regulatory targets in myelin genes. Journal of Neurochemistry. 115: 1409-20. PMID 21044070 DOI: 10.1111/J.1471-4159.2010.07045.X  0.432
2010 Ramsingh G, Koboldt DC, Trissal M, Chiappinelli KB, Wylie T, Koul S, Chang LW, Nagarajan R, Fehniger TA, Goodfellow P, Magrini V, Wilson RK, Ding L, Ley TJ, Mardis ER, et al. Complete characterization of the microRNAome in a patient with acute myeloid leukemia. Blood. 116: 5316-26. PMID 20876853 DOI: 10.1182/Blood-2010-05-285395  0.406
2010 Zhang Z, Bryan JL, DeLassus E, Chang LW, Liao W, Sandell LJ. CCAAT/enhancer-binding protein β and NF-κB mediate high level expression of chemokine genes CCL3 and CCL4 by human chondrocytes in response to IL-1β. The Journal of Biological Chemistry. 285: 33092-103. PMID 20702408 DOI: 10.1074/Jbc.M110.130377  0.359
2010 Zhang Z, Xing X, Hensley G, Chang LW, Liao W, Abu-Amer Y, Sandell LJ. Resistin induces expression of proinflammatory cytokines and chemokines in human articular chondrocytes via transcription and messenger RNA stabilization. Arthritis and Rheumatism. 62: 1993-2003. PMID 20506172 DOI: 10.1002/Art.27473  0.378
2010 Ramsingh G, Koboldt DC, Trissal M, Chiappinelli KB, Wylie T, Koul S, Chang L, Nagarajan R, Fehniger TA, Goodfellow P, Magrini V, Wilson RK, Ding L, Ley TJ, Mardis ER, et al. Abstract B12: Complete characterization of the “microRNAome” of a human acute myeloid leukemia Clinical Cancer Research. 16. DOI: 10.1158/1078-0432.Tcmusa10-B12  0.366
2009 Payton JE, Grieselhuber NR, Chang LW, Murakami M, Geiss GK, Link DC, Nagarajan R, Watson MA, Ley TJ. High throughput digital quantification of mRNA abundance in primary human acute myeloid leukemia samples. The Journal of Clinical Investigation. 119: 1714-26. PMID 19451695 DOI: 10.1172/Jci38248  0.394
2009 Ramsingh G, Koboldt DC, Fehniger TA, Wylie T, Magrini V, Trissal M, Koul S, Chang L, Nagarajan R, Ley TJ, Mardis E, Link DC. Comprehensive Evaluation of MicroRNA Genes and Gene Expression Using Next Generation Sequencing in a Patient with Acute Myelogenous Leukemia. Blood. 114: 271-271. DOI: 10.1182/Blood.V114.22.271.271  0.361
2009 Grieselhuber NR, Shaik JS, Chang L, McGrath S, Wartman LD, Nagarajan R, Wilson RK, Mardis E, Ley TJ. Chromatin Immunoprecipitation of GFP-Tagged PML-Rara Coupled to High-Throughput Next Generation Sequencing. Blood. 114: 1276-1276. DOI: 10.1182/Blood.V114.22.1276.1276  0.501
2008 Chang LW, Payton JE, Yuan W, Ley TJ, Nagarajan R, Stormo GD. Computational identification of the normal and perturbed genetic networks involved in myeloid differentiation and acute promyelocytic leukemia. Genome Biology. 9: R38. PMID 18291030 DOI: 10.1186/Gb-2008-9-2-R38  0.552
2007 Jones EA, Jang SW, Mager GM, Chang LW, Srinivasan R, Gokey NG, Ward RM, Nagarajan R, Svaren J. Interactions of Sox10 and Egr2 in myelin gene regulation. Neuron Glia Biology. 3: 377-87. PMID 18634568 DOI: 10.1017/S1740925X08000173  0.479
2007 Seo S, Lim JW, Yellajoshyula D, Chang LW, Kroll KL. Neurogenin and NeuroD direct transcriptional targets and their regulatory enhancers. The Embo Journal. 26: 5093-108. PMID 18007592 DOI: 10.1038/sj.emboj.7601923  0.425
2007 Davies SR, Chang LW, Patra D, Xing X, Posey K, Hecht J, Stormo GD, Sandell LJ. Computational identification and functional validation of regulatory motifs in cartilage-expressed genes. Genome Research. 17: 1438-47. PMID 17785538 DOI: 10.1101/gr.6224007  0.615
2007 Chang LW, Fontaine BR, Stormo GD, Nagarajan R. PAP: a comprehensive workbench for mammalian transcriptional regulatory sequence analysis. Nucleic Acids Research. 35: W238-44. PMID 17517777 DOI: 10.1093/Nar/Gkm308  0.596
2007 Payton JE, Grieselhuber NR, Chang L, Murakami MA, Yuan W, Link DC, Nagarajan R, Watson MA, Ley TJ. The Expression Signature of M3 AML Suggests Direct and Indirect Effects of PML-RARA on Target Genes. Blood. 110: 719-719. DOI: 10.1182/Blood.V110.11.719.719  0.38
2006 Chang LW, Nagarajan R, Magee JA, Milbrandt J, Stormo GD. A systematic model to predict transcriptional regulatory mechanisms based on overrepresentation of transcription factor binding profiles. Genome Research. 16: 405-13. PMID 16449500 DOI: 10.1101/Gr.4303406  0.626
2006 Ong CT, Cheng HT, Chang LW, Ohtsuka T, Kageyama R, Stormo GD, Kopan R. Target selectivity of vertebrate notch proteins. Collaboration between discrete domains and CSL-binding site architecture determines activation probability. The Journal of Biological Chemistry. 281: 5106-19. PMID 16365048 DOI: 10.1074/Jbc.M506108200  0.558
2006 Magee JA, Chang LW, Stormo GD, Milbrandt J. Direct, androgen receptor-mediated regulation of the FKBP5 gene via a distal enhancer element. Endocrinology. 147: 590-8. PMID 16210365 DOI: 10.1210/En.2005-1001  0.55
2004 Zhao T, Chang LW, McLeod HL, Stormo GD. PromoLign: a database for upstream region analysis and SNPs. Human Mutation. 23: 534-9. PMID 15146456 DOI: 10.1002/Humu.20049  0.587
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