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Gordon M. Crippen - Publications

Affiliations: 
1975-1980 Pharmaceutical Chemistry University of California, San Francisco, San Francisco, CA 
 1980-1985 Chemistry Texas A & M University, College Station, TX, United States 
 1985-2010 Pharmacy University of Michigan, Ann Arbor, Ann Arbor, MI 
Area:
Pharmaceutical Chemistry, Molecular Biology, Biochemistry
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46 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2005 Wang J, Wang T, Zuiderweg ER, Crippen GM. CASA: an efficient automated assignment of protein mainchain NMR data using an ordered tree search algorithm. Journal of Biomolecular Nmr. 33: 261-79. PMID 16341754 DOI: 10.1007/S10858-005-4079-8  0.508
2005 Yang VC, Naik SS, Song H, Dombkowski AA, Crippen G, Liang JF. Construction and characterization of a t-PA mutant for use in ATTEMPTS: a drug delivery system for achieving targeted thrombolysis. Journal of Controlled Release : Official Journal of the Controlled Release Society. 110: 164-76. PMID 16260060 DOI: 10.1016/J.Jconrel.2005.09.027  0.574
2004 Crippen GM. Statistical mechanics of protein folding by cluster distance geometry. Biopolymers. 75: 278-89. PMID 15378485 DOI: 10.1002/bip.20118  0.367
2004 Wang J, Crippen GM. Statistical mechanics of protein folding with separable energy functions. Biopolymers. 74: 214-20. PMID 15150796 DOI: 10.1002/Bip.20077  0.56
2004 Crippen GM. Cluster distance geometry of polypeptide chains. Journal of Computational Chemistry. 25: 1305-12. PMID 15139043 DOI: 10.1002/jcc.20056  0.326
2004 Chhajer M, Crippen GM. Toward correct protein folding potentials Journal of Biological Physics. 30: 171-185. DOI: 10.1023/B:JOBP.0000035854.68334.dd  0.374
2003 Wildman SA, Crippen GM. Validation of DAPPER for 3D QSAR: conformational search and chirality metric. Journal of Chemical Information and Computer Sciences. 43: 629-36. PMID 12653531 DOI: 10.1021/Ci0256081  0.642
2002 Wildman SA, Crippen GM. Three-dimensional molecular descriptors and a novel QSAR method. Journal of Molecular Graphics & Modelling. 21: 161-70. PMID 12463634 DOI: 10.1016/S1093-3263(02)00147-X  0.67
2002 Chhajer M, Crippen GM. A protein folding potential that places the native states of a large number of proteins near a local minimum. Bmc Structural Biology. 2: 4. PMID 12165098  0.338
2001 Crippen GM. Constructing smooth potential functions for protein folding Journal of Molecular Graphics and Modelling. 19: 87-93. PMID 11381534 DOI: 10.1016/S1093-3263(00)00132-7  0.326
2001 Wildman SA, Crippen GM. Evaluation of ligand overlap by atomic parameters. Journal of Chemical Information and Computer Sciences. 41: 446-50. PMID 11277735 DOI: 10.1021/Ci0000880  0.635
2000 Dombkowski AA, Crippen GM. Disulfide recognition in an optimized threading potential. Protein Engineering. 13: 679-89. PMID 11112506 DOI: 10.1093/Protein/13.10.679  0.67
2000 Ohkubo YZ, Crippen GM. Potential energy function for continuous state models of globular proteins. Journal of Computational Biology : a Journal of Computational Molecular Cell Biology. 7: 363-79. PMID 11108468 DOI: 10.1089/106652700750050835  0.72
1999 Wildman SA, Crippen GM. Prediction of physicochemical parameters by atomic contributions Journal of Chemical Information and Computer Sciences. 39: 868-873.  0.636
1998 Parks CA, Crippen GM, Topliss JG. The measurement of molecular diversity by receptor site interaction simulation Journal of Computer-Aided Molecular Design. 12: 441-449. PMID 9834906  0.656
1998 Crippen GM, Ohkubo YZ. Statistical mechanics of protein folding by exhaustive enumeration. Proteins. 32: 425-37. PMID 9726414 DOI: 10.1002/(Sici)1097-0134(19980901)32:4<425::Aid-Prot3>3.0.Co;2-F  0.707
1997 Crippen GM. Protein folding and fold recognition for square lattice models Folding and Design. 2: S58-S61. PMID 9269570  0.367
1996 Crippen GM, Maiorov VN. (Probably) all possible protein folds at low resolution Pacific Symposium On Biocomputing. Pacific Symposium On Biocomputing. 160-178. PMID 9390230  0.354
1996 Crippen GM. Failures of inverse folding and threading with gapped alignment Proteins: Structure, Function and Genetics. 26: 167-171. PMID 8916224 DOI: 10.1002/(SICI)1097-0134(199610)26:2<167::AID-PROT6>3.0.CO;2-D  0.304
1996 Crippen GM. Easily searched protein folding potentials Journal of Molecular Biology. 260: 467-475. PMID 8757807 DOI: 10.1006/jmbi.1996.0414  0.362
1995 Crippen GM, Maiorov VN. How many protein folding motifs are there? Journal of Molecular Biology. 252: 144-151. PMID 7666426 DOI: 10.1006/jmbi.1995.0481  0.307
1995 Maiorov VN, Crippen GM. Size-independent comparison of protein three-dimensional structures Proteins: Structure, Function and Genetics. 22: 273-283. PMID 7479700 DOI: 10.1002/prot.340220308  0.33
1994 Maiorov VN, Crippen GM. Significance of root-mean-square deviation in comparing three-dimensional structures of globular proteins Journal of Molecular Biology. 235: 625-634. PMID 8289285 DOI: 10.1006/jmbi.1994.1017  0.337
1994 Maiorov VN, Crippen GM. Learning about protein folding via potential functions Proteins: Structure, Function and Genetics. 20: 167-173. PMID 7846026 DOI: 10.1002/prot.340200206  0.339
1991 Crippen GM. Prediction of protein folding from amino acid sequence over discrete conformation spaces Biochemistry. 30: 4232-4237. PMID 2021616  0.364
1991 Seetharamulu P, Crippen GM. A potential function for protein folding Journal of Mathematical Chemistry. 6: 91-110. DOI: 10.1007/BF01192576  0.373
1990 Crippen GM, Snow ME. A 1.8 Å resolution potential function for protein folding Biopolymers. 29: 1479-1489. PMID 2361157 DOI: 10.1002/bip.360291014  0.35
1990 Crippen GM, Havel TF. Global energy minimization by rotational energy embedding Journal of Chemical Information and Computer Sciences. 30: 222-227. PMID 2211885  0.305
1989 Ghose AK, Crippen GM, Revankar GR, McKernan PA, Smee DF, Robins RK. Analysis of the in vitro antiviral activity of certain ribonucleosides against parainfluenza virus using a novel computer aided receptor modeling procedure. Journal of Medicinal Chemistry. 32: 746-56. PMID 2539476  0.308
1987 Crippen GM. Why energy embedding works Journal of Physical Chemistry. 91: 6341-6343.  0.322
1985 Crippen GM, Viswanadhan VN. Sidechain and backbone potential function for conformational analysis of proteins International Journal of Peptide and Protein Research. 25: 487-509. PMID 4019030  0.344
1984 Crippen GM, Viswanadhan VN. A potential function for conformational analysis of proteins International Journal of Peptide and Protein Research. 24: 279-296. PMID 6500807  0.37
1983 Havel TF, Kuntz ID, Crippen GM. The combinatorial distance geometry method for the calculation of molecular conformation. I. A new approach to an old problem Journal of Theoretical Biology. 104: 359-381. PMID 6656266 DOI: 10.1016/0022-5193(83)90112-1  0.516
1983 Havel TF, Crippen GM, Kuntz ID, Blaney JM. The combinatorial distance geometry method for the calculation of molecular conformation II. Sample problems and computational statistics Journal of Theoretical Biology. 104: 383-400. PMID 6197591 DOI: 10.1016/0022-5193(83)90113-3  0.508
1981 Oobatake M, Crippen GM. Residue-residue potential function for conformational analysis of proteins Journal of Physical Chemistry. 85: 1187-1197.  0.379
1980 Connolly ML, Kuntz ID, Crippen GM. Linked and threaded loops in proteins Biopolymers - Peptide Science Section. 19: 1167-1182. PMID 7378549  0.505
1980 Kuntz ID, Crippen GM. A computer model for the 30S ribosome subunit Biophysical Journal. 32: 677-695. PMID 7020786  0.556
1979 Crippen GM. Distance constraints on macromolecular conformation International Journal of Peptide and Protein Research. 13: 320-326. PMID 429105  0.307
1979 Kuntz ID, Crippen GM. Protein densities International Journal of Peptide and Protein Research. 13: 223-228. PMID 429098  0.503
1978 Crippen GM, Kuntz ID. A survey of atom packing in globular proteins International Journal of Peptide and Protein Research. 12: 47-56. PMID 681085  0.529
1977 Crippen GM, Kuntz ID. Directional structural features of globular proteins Journal of Theoretical Biology. 66: 47-61. PMID 875421 DOI: 10.1016/0022-5193(77)90311-3  0.523
1976 Kuntz ID, Crippen GM, Kollman PA, Kimelman D. Calculation of protein tertiary structure Journal of Molecular Biology. 106: 983-994. PMID 978745 DOI: 10.1016/0022-2836(76)90347-8  0.58
1973 Crippen GM, Scheraga HA. Minimization of polypeptide energy XII. The methods of partial energies and cubic subdivision Journal of Computational Physics. 12: 491-497. DOI: 10.1016/0021-9991(73)90100-9  0.424
1971 Crippen GM, Scheraga HA. Minimization of polypeptide energy. XI. The method of gentlest ascent Archives of Biochemistry and Biophysics. 144: 462-466. PMID 5569893 DOI: 10.1016/0003-9861(71)90349-3  0.4
1971 Crippen GM, Scheraga HA. Minimization of polypeptide energy. X. A global search algorithm Archives of Biochemistry and Biophysics. 144: 453-461. PMID 5569892 DOI: 10.1016/0003-9861(71)90348-1  0.407
1969 Crippen GM, Scheraga HA. Minimization of polypeptide energy. 8. Application of the deflation technique to a dipeptide Proceedings of the National Academy of Sciences of the United States of America. 64: 42-49. PMID 5263023 DOI: 10.1073/Pnas.64.1.42  0.393
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