Year |
Citation |
Score |
2024 |
King CP, Chitre AS, Leal-Gutiérrez JD, Tripi JA, Hughson AR, Horvath AP, Lamparelli AC, George A, Martin C, St Pierre CL, Bimschleger HV, Gao J, Cheng R, Nguyen KM, Holl KL, et al. Genome-Wide Association Study in Outbred Heterogeneous Stock Rats Identifies Multiple Loci for the Incentive Salience of Reward Cues. Biorxiv : the Preprint Server For Biology. PMID 38559127 DOI: 10.1101/2024.03.13.584852 |
0.351 |
|
2023 |
Xu J, Casanave R, Chitre AS, Wang Q, Nguyen KM, Blake C, Wagle M, Cheng R, Polesskaya O, Palmer AA, Guo S. Causal Genetic Loci for a Motivated Behavior Spectrum Harbor Psychiatric Risk Genes. Biorxiv : the Preprint Server For Biology. PMID 37732200 DOI: 10.1101/2023.09.06.556529 |
0.314 |
|
2023 |
Fowler S, Wang T, Munro D, Kumar A, Chitre AS, Hollingsworth TJ, Garcia Martinez A, St Pierre CL, Bimschleger H, Gao J, Cheng R, Mohammadi P, Chen H, Palmer AA, Polesskaya O, et al. Genome-wide association study finds multiple loci associated with intraocular pressure in HS rats. Frontiers in Genetics. 13: 1029058. PMID 36793389 DOI: 10.3389/fgene.2022.1029058 |
0.345 |
|
2023 |
Chitre AS, Hebda-Bauer EK, Blandino P, Bimschleger H, Nguyen KM, Maras P, Li F, Ozel AB, Pan Y, Polesskaya O, Cheng R, Flagel SB, Watson SJ, Li J, Akil H, et al. Genome-wide association study in a rat model of temperament identifies multiple loci for exploratory locomotion and anxiety-like traits. Frontiers in Genetics. 13: 1003074. PMID 36712851 DOI: 10.3389/fgene.2022.1003074 |
0.424 |
|
2022 |
Gunturkun MH, Wang T, Chitre AS, Garcia Martinez A, Holl K, St Pierre C, Bimschleger H, Gao J, Cheng R, Polesskaya O, Solberg Woods LC, Palmer AA, Chen H. Genome-Wide Association Study on Three Behaviors Tested in an Open Field in Heterogeneous Stock Rats Identifies Multiple Loci Implicated in Psychiatric Disorders. Frontiers in Psychiatry. 13: 790566. PMID 35237186 DOI: 10.3389/fpsyt.2022.790566 |
0.39 |
|
2020 |
Chitre AS, Polesskaya O, Holl K, Gao J, Cheng R, Bimschleger H, Garcia Martinez A, George T, Gileta AF, Han W, Horvath A, Hughson A, Ishiwari K, King CP, Lamparelli A, et al. Genome-Wide Association Study in 3,173 Outbred Rats Identifies Multiple Loci for Body Weight, Adiposity, and Fasting Glucose. Obesity (Silver Spring, Md.). PMID 32860487 DOI: 10.1002/Oby.22927 |
0.373 |
|
2020 |
Zhou X, St Pierre CL, Gonzales NM, Zou J, Cheng R, Chitre AS, Sokoloff G, Palmer AA. Genome-Wide Association Study in Two Cohorts from a Multi-generational Mouse Advanced Intercross Line Highlights the Difficulty of Replication. G3 (Bethesda, Md.). PMID 31974095 DOI: 10.1534/G3.119.400763 |
0.445 |
|
2020 |
Hernandez Cordero AI, Gonzales NM, Parker CC, Sokoloff G, Vandenbergh DJ, Cheng R, Abney M, Skol A, Douglas A, Palmer AA, Gregory JS, Lionikas A. Genome-wide Associations Reveal Human-Mouse Genetic Convergence and Modifiers of Myogenesis, CPNE1 and STC2. American Journal of Human Genetics. 106: 138. PMID 31901248 DOI: 10.1016/j.ajhg.2019.12.008 |
0.317 |
|
2019 |
Hernandez Cordero AI, Gonzales NM, Parker CC, Sokolof G, Vandenbergh DJ, Cheng R, Abney M, Sko A, Douglas A, Palmer AA, Gregory JS, Lionikas A. Genome-Wide Associations Reveal Human-Mouse Genetic Convergence and Modifiers of Myogenesis, CPNE1 and STC2. American Journal of Human Genetics. PMID 31761296 DOI: 10.1016/J.Ajhg.2019.10.014 |
0.383 |
|
2019 |
Rungrat T, Almonte AA, Cheng R, Gollan PJ, Stuart T, Aro EM, Borevitz JO, Pogson B, Wilson PB. A Genome-Wide Association Study of Non-Photochemical Quenching in response to local seasonal climates in . Plant Direct. 3: e00138. PMID 31276082 DOI: 10.1002/pld3.138 |
0.355 |
|
2018 |
Wilson PB, Streich JC, Murray KD, Eichten SR, Cheng R, Aitken NC, Spokas K, Warthmann N, Gordon SP, Contributors A, Vogel JP, Borevitz JO. Global Diversity of the Brachypodium Species Complex as a Resource for Genome Wide Association Studies Demonstrated for Agronomic Traits in Response to Climate. Genetics. PMID 30446522 DOI: 10.1534/Genetics.118.301589 |
0.434 |
|
2017 |
Carroll A, Cheng R, Collie-Duguid E, Meharg C, Scholz ME, Fiering SN, Fields JL, Palmer AA, Lionikas A. Fine mapping of genes determining extrafusal fiber properties in murine soleus muscle. Physiological Genomics. physiolgenomics.0009. PMID 28087756 DOI: 10.1152/Physiolgenomics.00092.2016 |
0.338 |
|
2017 |
Cheng R, Doerge RW, Borevitz J. Novel Resampling Improves Statistical Power for Multiple-Trait QTL Mapping. G3 (Bethesda, Md.). PMID 28064191 DOI: 10.1534/G3.116.037531 |
0.624 |
|
2016 |
Rungrat T, Awlia M, Brown T, Cheng R, Sirault X, Fajkus J, Trtilek M, Furbank B, Badger M, Tester M, Pogson BJ, Borevitz JO, Wilson P. Using Phenomic Analysis of Photosynthetic Function for Abiotic Stress Response Gene Discovery. The Arabidopsis Book. 14: e0185. PMID 27695390 DOI: 10.1199/Tab.0185 |
0.36 |
|
2015 |
Yazdani N, Parker CC, Shen Y, Reed ER, Guido MA, Kole LA, Kirkpatrick SL, Lim JE, Sokoloff G, Cheng R, Johnson WE, Palmer AA, Bryant CD. Hnrnph1 Is A Quantitative Trait Gene for Methamphetamine Sensitivity. Plos Genetics. 11: e1005713. PMID 26658939 DOI: 10.1371/Journal.Pgen.1005713 |
0.459 |
|
2014 |
Gatti DM, Svenson KL, Shabalin A, Wu LY, Valdar W, Simecek P, Goodwin N, Cheng R, Pomp D, Palmer A, Chesler EJ, Broman KW, Churchill GA. Quantitative trait locus mapping methods for diversity outbred mice. G3 (Bethesda, Md.). 4: 1623-33. PMID 25237114 DOI: 10.1534/G3.114.013748 |
0.538 |
|
2014 |
Carbonetto P, Cheng R, Gyekis JP, Parker CC, Blizard DA, Palmer AA, Lionikas A. Discovery and refinement of muscle weight QTLs in B6 × D2 advanced intercross mice. Physiological Genomics. 46: 571-82. PMID 24963006 DOI: 10.1152/Physiolgenomics.00055.2014 |
0.487 |
|
2014 |
Brown TB, Cheng R, Sirault XR, Rungrat T, Murray KD, Trtilek M, Furbank RT, Badger M, Pogson BJ, Borevitz JO. TraitCapture: genomic and environment modelling of plant phenomic data. Current Opinion in Plant Biology. 18: 73-9. PMID 24646691 DOI: 10.1016/J.Pbi.2014.02.002 |
0.406 |
|
2014 |
Li Y, Cheng R, Spokas KA, Palmer AA, Borevitz JO. Genetic variation for life history sensitivity to seasonal warming in Arabidopsis thaliana. Genetics. 196: 569-77. PMID 24281156 DOI: 10.1534/Genetics.113.157628 |
0.433 |
|
2014 |
Bryant CD, Guido MA, Kole LA, Cheng R. The heritability of oxycodone reward and concomitant phenotypes in a LG/J × SM/J mouse advanced intercross line. Addiction Biology. 19: 552-61. PMID 23231598 DOI: 10.1111/Adb.12016 |
0.418 |
|
2013 |
Cheng R, Parker CC, Abney M, Palmer AA. Practical considerations regarding the use of genotype and pedigree data to model relatedness in the context of genome-wide association studies. G3 (Bethesda, Md.). 3: 1861-7. PMID 23979941 DOI: 10.1534/G3.113.007948 |
0.437 |
|
2013 |
Cheng R, Borevitz J, Doerge RW. Selecting informative traits for multivariate quantitative trait locus mapping helps to gain optimal power. Genetics. 195: 683-91. PMID 23979571 DOI: 10.1534/Genetics.113.155937 |
0.643 |
|
2013 |
Cheng R, Palmer AA. A simulation study of permutation, bootstrap, and gene dropping for assessing statistical significance in the case of unequal relatedness. Genetics. 193: 1015-8. PMID 23267053 DOI: 10.1534/Genetics.112.146332 |
0.321 |
|
2012 |
Bryant CD, Kole LA, Guido MA, Cheng R, Palmer AA. Methamphetamine-induced conditioned place preference in LG/J and SM/J mouse strains and an F45/F46 advanced intercross line. Frontiers in Genetics. 3: 126. PMID 22798962 DOI: 10.3389/Fgene.2012.00126 |
0.367 |
|
2012 |
Svenson KL, Gatti DM, Valdar W, Welsh CE, Cheng R, Chesler EJ, Palmer AA, McMillan L, Churchill GA. High-resolution genetic mapping using the Mouse Diversity outbred population. Genetics. 190: 437-47. PMID 22345611 DOI: 10.1534/Genetics.111.132597 |
0.506 |
|
2012 |
Bartnikas TB, Parker CC, Cheng R, Campagna DR, Lim JE, Palmer AA, Fleming MD. QTLs for murine red blood cell parameters in LG/J and SM/J F(2) and advanced intercross lines. Mammalian Genome : Official Journal of the International Mammalian Genome Society. 23: 356-66. PMID 22322356 DOI: 10.1007/S00335-012-9393-3 |
0.455 |
|
2012 |
Parker CC, Sokoloff G, Cheng R, Palmer AA. Genome-wide association for fear conditioning in an advanced intercross mouse line. Behavior Genetics. 42: 437-48. PMID 22237917 DOI: 10.1007/S10519-011-9524-8 |
0.458 |
|
2012 |
Parker CC, Cheng R, Sokoloff G, Palmer AA. Genome-wide association for methamphetamine sensitivity in an advanced intercross mouse line. Genes, Brain, and Behavior. 11: 52-61. PMID 22032291 DOI: 10.1111/J.1601-183X.2011.00747.X |
0.502 |
|
2011 |
Cheng R, Abney M, Palmer AA, Skol AD. QTLRel: an R package for genome-wide association studies in which relatedness is a concern. Bmc Genetics. 12: 66. PMID 21794153 DOI: 10.1186/1471-2156-12-66 |
0.508 |
|
2011 |
Parker CC, Cheng R, Sokoloff G, Lim JE, Skol AD, Abney M, Palmer AA. Fine-mapping alleles for body weight in LG/J × SM/J F₂ and F(34) advanced intercross lines. Mammalian Genome : Official Journal of the International Mammalian Genome Society. 22: 563-71. PMID 21761260 DOI: 10.1007/S00335-011-9349-Z |
0.435 |
|
2011 |
Kärst S, Cheng R, Schmitt AO, Yang H, de Villena FP, Palmer AA, Brockmann GA. Genetic determinants for intramuscular fat content and water-holding capacity in mice selected for high muscle mass. Mammalian Genome : Official Journal of the International Mammalian Genome Society. 22: 530-43. PMID 21732194 DOI: 10.1007/S00335-011-9342-6 |
0.408 |
|
2010 |
Lionikas A, Cheng R, Lim JE, Palmer AA, Blizard DA. Fine-mapping of muscle weight QTL in LG/J and SM/J intercrosses. Physiological Genomics. 42: 33-8. PMID 20627939 DOI: 10.1152/Physiolgenomics.00100.2010 |
0.465 |
|
2010 |
Samocha KE, Lim JE, Cheng R, Sokoloff G, Palmer AA. Fine mapping of QTL for prepulse inhibition in LG/J and SM/J mice using F(2) and advanced intercross lines. Genes, Brain, and Behavior. 9: 759-67. PMID 20597988 DOI: 10.1111/J.1601-183X.2010.00613.X |
0.459 |
|
2010 |
Cheng R, Lim JE, Samocha KE, Sokoloff G, Abney M, Skol AD, Palmer AA. Genome-wide association studies and the problem of relatedness among advanced intercross lines and other highly recombinant populations. Genetics. 185: 1033-44. PMID 20439773 DOI: 10.1534/Genetics.110.116863 |
0.493 |
|
2008 |
Bogdan M, Frommlet F, Biecek P, Cheng R, Ghosh JK, Doerge RW. Extending the modified bayesian information criterion (mBIC) to dense markers and multiple interval mapping. Biometrics. 64: 1162-9. PMID 18266892 DOI: 10.1111/J.1541-0420.2008.00989.X |
0.621 |
|
Low-probability matches (unlikely to be authored by this person) |
2017 |
Holl K, He H, Wedemeyer M, Clopton L, Wert S, Meckes JK, Cheng R, Kastner A, Palmer AA, Redei EE, Solberg Woods LC. Heterogeneous stock rats: a model to study the genetics of despair-like behavior in adolescence. Genes, Brain, and Behavior. PMID 28834208 DOI: 10.1111/Gbb.12410 |
0.295 |
|
2017 |
O'Leary BM, Lee CP, Atkin OK, Cheng R, Brown TB, Millar AH. Variation in Leaf Respiration Rates at Night Correlate with Carbohydrate and Amino Acid Supply. Plant Physiology. PMID 28615345 DOI: 10.1104/Pp.17.00610 |
0.271 |
|
2023 |
Chitre AS, Polesskaya O, Munro D, Cheng R, Mohammadi P, Holl K, Gao J, Bimschleger H, Martinez AG, George A, Gileta AF, Horvath A, Hughson A, Ishiwari K, King CP, et al. Exponential increase in QTL detection with increased sample size. Genetics. PMID 36974931 DOI: 10.1093/genetics/iyad054 |
0.234 |
|
2021 |
Liu H, Han L, Kang G, Zhang M, Cheng R. Editorial: Statistical Methods, Computing and Resources for Genome-Wide Association Studies. Frontiers in Genetics. 12: 714894. PMID 34422016 DOI: 10.3389/fgene.2021.714894 |
0.225 |
|
2023 |
Wright SN, Leger BS, Rosenthal SB, Liu SN, Jia T, Chitre AS, Polesskaya O, Holl K, Gao J, Cheng R, Garcia Martinez A, George A, Gileta AF, Han W, Netzley AH, et al. Genome-wide association studies of human and rat BMI converge on synapse, epigenome, and hormone signaling networks. Cell Reports. 42: 112873. PMID 37527041 DOI: 10.1016/j.celrep.2023.112873 |
0.202 |
|
2022 |
Han L, Liu H, Kang G, Zhang M, Cheng R. Editorial: Statistical methods, computing, and resources for genome-wide association studies, Volume II. Frontiers in Genetics. 13: 1040022. PMID 36338957 DOI: 10.3389/fgene.2022.1040022 |
0.193 |
|
Hide low-probability matches. |