Seth L. Shipman, PhD - Publications

Affiliations: 
2013- Genetics Harvard Medical School, Boston, MA, United States 
Area:
neuroscience, electrophysiology, synaptic transmission, neurodevelopment, synthetic biology
Website:
sethshipman.com

18 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Peter M, Shipman S, Macklis JD. Limitations of fluorescent timer proteins toward isolation of developmentally and transcriptionally synchronized populations of human pluripotent stem cells and neural progenitors highlight unique expression and fluorescence maturation kinetics by human cells. Biorxiv : the Preprint Server For Biology. PMID 37609140 DOI: 10.1101/2023.08.04.552012  0.553
2023 Lear SK, Lopez SC, González-Delgado A, Bhattarai-Kline S, Shipman SL. Temporally resolved transcriptional recording in E. coli DNA using a Retro-Cascorder. Nature Protocols. PMID 37059915 DOI: 10.1038/s41596-023-00819-6  0.304
2022 Lear SK, Shipman SL. Molecular recording: transcriptional data collection into the genome. Current Opinion in Biotechnology. 79: 102855. PMID 36481341 DOI: 10.1016/j.copbio.2022.102855  0.319
2022 Bhattarai-Kline S, Lear SK, Fishman CB, Lopez SC, Lockshin ER, Schubert MG, Nivala J, Church GM, Shipman SL. Recording gene expression order in DNA by CRISPR addition of retron barcodes. Nature. 608: 217-225. PMID 35896746 DOI: 10.1038/s41586-022-04994-6  0.721
2021 Schubert MG, Goodman DB, Wannier TM, Kaur D, Farzadfard F, Lu TK, Shipman SL, Church GM. High-throughput functional variant screens via in vivo production of single-stranded DNA. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 33906944 DOI: 10.1073/pnas.2018181118  0.692
2021 Filsinger GT, Wannier TM, Pedersen FB, Lutz ID, Zhang J, Stork DA, Debnath A, Gozzi K, Kuchwara H, Volf V, Wang S, Rios X, Gregg CJ, Lajoie MJ, Shipman SL, et al. Characterizing the portability of phage-encoded homologous recombination proteins. Nature Chemical Biology. PMID 33462496 DOI: 10.1038/s41589-020-00710-5  0.698
2020 Ng AHM, Khoshakhlagh P, Rojo Arias JE, Pasquini G, Wang K, Swiersy A, Shipman SL, Appleton E, Kiaee K, Kohman RE, Vernet A, Dysart M, Leeper K, Saylor W, Huang JY, et al. A comprehensive library of human transcription factors for cell fate engineering. Nature Biotechnology. PMID 33257861 DOI: 10.1038/s41587-020-0742-6  0.661
2018 Nivala J, Shipman SL, Church GM. Spontaneous CRISPR loci generation in vivo by non-canonical spacer integration. Nature Microbiology. PMID 29379209 DOI: 10.1038/S41564-017-0097-Z  0.717
2017 Shipman SL, Nivala J, Macklis JD, Church GM. CRISPR-Cas encoding of a digital movie into the genomes of a population of living bacteria. Nature. PMID 28700573 DOI: 10.1038/Nature23017  0.727
2016 Shipman SL, Nivala J, Macklis JD, Church GM. Molecular recordings by directed CRISPR spacer acquisition. Science (New York, N.Y.). 353: aaf1175. PMID 27284167 DOI: 10.1126/Science.Aaf1175  0.734
2015 Bemben MA, Shipman SL, Nicoll RA, Roche KW. The cellular and molecular landscape of neuroligins. Trends in Neurosciences. 38: 496-505. PMID 26209464 DOI: 10.1016/J.Tins.2015.06.004  0.531
2015 Bemben MA, Shipman SL, Nicoll RA, Roche KW. The cellular and molecular landscape of neuroligins Trends in Neurosciences. 38: 496-505. DOI: 10.1016/j.tins.2015.06.004  0.397
2014 Busskamp V, Lewis NE, Guye P, Ng AH, Shipman SL, Byrne SM, Sanjana NE, Murn J, Li Y, Li S, Stadler M, Weiss R, Church GM. Rapid neurogenesis through transcriptional activation in human stem cells. Molecular Systems Biology. 10: 760. PMID 25403753 DOI: 10.15252/Msb.20145508  0.699
2014 Bemben MA, Shipman SL, Hirai T, Herring BE, Li Y, Badger JD, Nicoll RA, Diamond JS, Roche KW. CaMKII phosphorylation of neuroligin-1 regulates excitatory synapses. Nature Neuroscience. 17: 56-64. PMID 24336150 DOI: 10.1038/Nn.3601  0.699
2013 Shipman SL, Herring BE, Suh YH, Roche KW, Nicoll RA. Distance-dependent scaling of AMPARs is cell-autonomous and GluA2 dependent. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 33: 13312-9. PMID 23946389 DOI: 10.1523/Jneurosci.0678-13.2013  0.707
2012 Shipman SL, Nicoll RA. Dimerization of postsynaptic neuroligin drives synaptic assembly via transsynaptic clustering of neurexin. Proceedings of the National Academy of Sciences of the United States of America. 109: 19432-7. PMID 23129658 DOI: 10.1073/Pnas.1217633109  0.523
2012 Shipman SL, Nicoll RA. A subtype-specific function for the extracellular domain of neuroligin 1 in hippocampal LTP. Neuron. 76: 309-16. PMID 23083734 DOI: 10.1016/J.Neuron.2012.07.024  0.565
2011 Shipman SL, Schnell E, Hirai T, Chen BS, Roche KW, Nicoll RA. Functional dependence of neuroligin on a new non-PDZ intracellular domain. Nature Neuroscience. 14: 718-26. PMID 21532576 DOI: 10.1038/Nn.2825  0.657
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