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15/130 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2017 Gao NL, Zhang C, Zhang Z, Hu S, Lercher MJ, Zhao XM, Bork P, Liu Z, Chen WH. MVP: a microbe-phage interaction database. Nucleic Acids Research. PMID 29177508 DOI: 10.1093/Nar/Gkx1124  0.329
2017 Gao N, Lu G, Lercher MJ, Chen WH. Selection for energy efficiency drives strand-biased gene distribution in prokaryotes. Scientific Reports. 7: 10572. PMID 28874819 DOI: 10.1038/S41598-017-11159-3  0.31
2016 Chen WH, Lu G, Bork P, Hu S, Lercher MJ. Energy efficiency trade-offs drive nucleotide usage in transcribed regions. Nature Communications. 7: 11334. PMID 27098217 DOI: 10.1038/Ncomms11334  0.359
2016 Yanai I, Lercher MJ. Forty years of The Selfish Gene are not enough. Genome Biology. 17: 39. PMID 26936472 DOI: 10.1186/S13059-016-0910-7  0.347
2014 Schönknecht G, Weber AP, Lercher MJ. Horizontal gene acquisitions by eukaryotes as drivers of adaptive evolution. Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology. 36: 9-20. PMID 24323918 DOI: 10.1002/bies.201300095  0.303
2012 Chen WH, Trachana K, Lercher MJ, Bork P. Younger genes are less likely to be essential than older genes, and duplicates are less likely to be essential than singletons of the same age. Molecular Biology and Evolution. 29: 1703-6. PMID 22319151 DOI: 10.1093/Molbev/Mss014  0.412
2012 Chen WH, Minguez P, Lercher MJ, Bork P. OGEE: an online gene essentiality database. Nucleic Acids Research. 40: D901-6. PMID 22075992 DOI: 10.1093/Nar/Gkr986  0.433
2011 Wang GZ, Chen WH, Lercher MJ. Coexpression of linked gene pairs persists long after their separation. Genome Biology and Evolution. 3: 565-70. PMID 21737396 DOI: 10.1093/Gbe/Evr049  0.309
2010 Hao L, Ge X, Wan H, Hu S, Lercher MJ, Yu J, Chen WH. Human functional genetic studies are biased against the medically most relevant primate-specific genes. Bmc Evolutionary Biology. 10: 316. PMID 20961448 DOI: 10.1186/1471-2148-10-316  0.3
2007 Raes J, Korbel JO, Lercher MJ, von Mering C, Bork P. Prediction of effective genome size in metagenomic samples. Genome Biology. 8: R10. PMID 17224063 DOI: 10.1186/Gb-2007-8-1-R10  0.353
2006 Lercher MJ, Hurst LD. Co-expressed yeast genes cluster over a long range but are not regularly spaced. Journal of Molecular Biology. 359: 825-31. PMID 16631793 DOI: 10.1016/j.jmb.2006.03.051  0.306
2006 Yanai I, Korbel JO, Boue S, McWeeney SK, Bork P, Lercher MJ. Similar gene expression profiles do not imply similar tissue functions. Trends in Genetics : Tig. 22: 132-8. PMID 16480787 DOI: 10.1016/J.Tig.2006.01.006  0.402
2004 Hurst LD, Pál C, Lercher MJ. The evolutionary dynamics of eukaryotic gene order. Nature Reviews. Genetics. 5: 299-310. PMID 15131653 DOI: 10.1038/Nrg1319  0.328
2003 Lercher MJ, Blumenthal T, Hurst LD. Coexpression of neighboring genes in Caenorhabditis elegans is mostly due to operons and duplicate genes. Genome Research. 13: 238-43. PMID 12566401 DOI: 10.1101/Gr.553803  0.344
2001 Jacobs A, Voges J, Reszka R, Lercher M, Gossmann A, Kracht L, Kaestle C, Wagner R, Wienhard K, Heiss WD. Positron-emission tomography of vector-mediated gene expression in gene therapy for gliomas. Lancet (London, England). 358: 727-9. PMID 11551583 DOI: 10.1016/S0140-6736(01)05904-9  0.338
Low-probability matches (unlikely to be authored by this person)
2017 Pang TY, Lercher MJ. Supra-operonic clusters of functionally related genes (SOCs) are a source of horizontal gene co-transfers. Scientific Reports. 7: 40294. PMID 28067311 DOI: 10.1038/srep40294  0.3
2004 Lercher MJ, Chamary JV, Hurst LD. Genomic regionality in rates of evolution is not explained by clustering of genes of comparable expression profile. Genome Research. 14: 1002-13. PMID 15173108 DOI: 10.1101/Gr.1597404  0.296
2005 Keightley PD, Lercher MJ, Eyre-Walker A. Evidence for widespread degradation of gene control regions in hominid genomes. Plos Biology. 3: e42. PMID 15678168 DOI: 10.1371/Journal.Pbio.0030042  0.294
2006 Savard J, Tautz D, Lercher MJ. Genome-wide acceleration of protein evolution in flies (Diptera). Bmc Evolutionary Biology. 6: 7. PMID 16436210 DOI: 10.1186/1471-2148-6-7  0.288
2012 Grassi L, Caselle M, Lercher MJ, Lagomarsino MC. Horizontal gene transfers as metagenomic gene duplications. Molecular Biosystems. 8: 790-5. PMID 22218456 DOI: 10.1039/c2mb05330f  0.285
2002 Lercher MJ, Urrutia AO, Hurst LD. Clustering of housekeeping genes provides a unified model of gene order in the human genome. Nature Genetics. 31: 180-3. PMID 11992122 DOI: 10.1038/ng887  0.283
2009 Warnecke T, Wang GZ, Lercher MJ, Hurst LD. Does negative auto-regulation increase gene duplicability? Bmc Evolutionary Biology. 9: 193. PMID 19664220 DOI: 10.1186/1471-2148-9-193  0.279
2005 Pál C, Papp B, Lercher MJ. Horizontal gene transfer depends on gene content of the host. Bioinformatics (Oxford, England). 21: ii222-3. PMID 16204108 DOI: 10.1093/Bioinformatics/Bti1136  0.277
2013 Schönknecht G, Chen WH, Ternes CM, Barbier GG, Shrestha RP, Stanke M, Bräutigam A, Baker BJ, Banfield JF, Garavito RM, Carr K, Wilkerson C, Rensing SA, Gagneul D, Dickenson NE, ... ... Lercher MJ, et al. Gene transfer from bacteria and archaea facilitated evolution of an extremophilic eukaryote. Science (New York, N.Y.). 339: 1207-10. PMID 23471408 DOI: 10.1126/Science.1231707  0.276
2010 Chen WH, de Meaux J, Lercher MJ. Co-expression of neighbouring genes in Arabidopsis: separating chromatin effects from direct interactions. Bmc Genomics. 11: 178. PMID 20233415 DOI: 10.1186/1471-2164-11-178  0.275
2011 Wang GZ, Lercher MJ, Hurst LD. Transcriptional coupling of neighboring genes and gene expression noise: evidence that gene orientation and noncoding transcripts are modulators of noise. Genome Biology and Evolution. 3: 320-31. PMID 21402863 DOI: 10.1093/gbe/evr025  0.274
2018 Alzoubi D, Desouki AA, Lercher MJ. Alleles of a gene differ in pleiotropy, often mediated through currency metabolite production, in E. coli and yeast metabolic simulations. Scientific Reports. 8: 17252. PMID 30467356 DOI: 10.1038/s41598-018-35092-1  0.271
2015 Dilthey A, Lercher MJ. Horizontally transferred genes cluster spatially and metabolically. Biology Direct. 10: 72. PMID 26690249 DOI: 10.1186/s13062-015-0102-5  0.271
2010 He F, Chen WH, Collins S, Acquisti C, Goebel U, Ramos-Onsins S, Lercher MJ, de Meaux J. Assessing the influence of adjacent gene orientation on the evolution of gene upstream regions in Arabidopsis thaliana. Genetics. 185: 695-701. PMID 20233855 DOI: 10.1534/Genetics.110.114629  0.267
2006 Keightley PD, Lercher MJ, Eyre-Walker A. Understanding the degradation of hominid gene control. Plos Computational Biology. 2: e19; author reply e2. PMID 16604186 DOI: 10.1371/Journal.Pcbi.0020019  0.259
2006 Pál C, Papp B, Lercher MJ, Csermely P, Oliver SG, Hurst LD. Chance and necessity in the evolution of minimal metabolic networks. Nature. 440: 667-70. PMID 16572170 DOI: 10.1038/Nature04568  0.25
2008 Lercher MJ, Pál C. Integration of horizontally transferred genes into regulatory interaction networks takes many million years. Molecular Biology and Evolution. 25: 559-67. PMID 18158322 DOI: 10.1093/Molbev/Msm283  0.247
2003 Lercher MJ, Urrutia AO, Pavlícek A, Hurst LD. A unification of mosaic structures in the human genome. Human Molecular Genetics. 12: 2411-5. PMID 12915446 DOI: 10.1093/hmg/ddg251  0.239
2021 Hu XP, Lercher MJ. An optimal growth law for RNA composition and its partial implementation through ribosomal and tRNA gene locations in bacterial genomes. Plos Genetics. 17: e1009939. PMID 34843465 DOI: 10.1371/journal.pgen.1009939  0.238
2003 Lercher MJ, Urrutia AO, Hurst LD. Evidence that the human X chromosome is enriched for male-specific but not female-specific genes. Molecular Biology and Evolution. 20: 1113-6. PMID 12777530 DOI: 10.1093/molbev/msg131  0.231
2006 Savard J, Tautz D, Richards S, Weinstock GM, Gibbs RA, Werren JH, Tettelin H, Lercher MJ. Phylogenomic analysis reveals bees and wasps (Hymenoptera) at the base of the radiation of Holometabolous insects. Genome Research. 16: 1334-8. PMID 17065606 DOI: 10.1101/Gr.5204306  0.222
2018 Pfeifer B, Lercher MJ. BlockFeST : Bayesian calculation of region-specific FST to detect local adaptation. Bioinformatics (Oxford, England). PMID 29718170 DOI: 10.1093/bioinformatics/bty299  0.221
2002 Lercher MJ, Hurst LD. Can mutation or fixation biases explain the allele frequency distribution of human single nucleotide polymorphisms (SNPs)? Gene. 300: 53-8. PMID 12468085 DOI: 10.1016/S0378-1119(02)01040-5  0.217
2017 Jin H, Lu X, Ni J, Sun J, Gu B, Ding B, Zhu H, Ma C, Cui M, Xu Y, Zhang Z, Lercher M, Chen J, Gao N, Wang S. HOTAIR rs7958904 polymorphism is associated with increased cervical cancer risk in a Chinese population. Scientific Reports. 7: 3144. PMID 28600545 DOI: 10.1038/S41598-017-03174-1  0.21
2019 Alzoubi D, Desouki AA, Lercher MJ. Flux balance analysis with or without molecular crowding fails to predict two thirds of experimentally observed epistasis in yeast. Scientific Reports. 9: 11837. PMID 31413270 DOI: 10.1038/s41598-019-47935-6  0.207
2001 Herholz K, Lercher M, Wienhard K, Bauer B, Lenz O, Heiss WD. PET measurement of cerebral acetylcholine esterase activity without blood sampling. European Journal of Nuclear Medicine. 28: 472-7. PMID 11357497 DOI: 10.1007/S002590100492  0.207
2002 Smith NG, Lercher MJ. Regional similarities in polymorphism in the human genome extend over many megabases. Trends in Genetics : Tig. 18: 281-3. PMID 12044348 DOI: 10.1016/S0168-9525(02)02659-8  0.202
2020 Yanai I, Lercher M. A hypothesis is a liability. Genome Biology. 21: 231. PMID 32883349 DOI: 10.1186/S13059-020-02133-W  0.202
2004 Webster MT, Smith NG, Lercher MJ, Ellegren H. Gene expression, synteny, and local similarity in human noncoding mutation rates. Molecular Biology and Evolution. 21: 1820-30. PMID 15175414 DOI: 10.1093/Molbev/Msh181  0.201
2019 Pang TY, Lercher MJ. Each of 3,323 metabolic innovations in the evolution of arose through the horizontal transfer of a single DNA segment. Proceedings of the National Academy of Sciences of the United States of America. 116: 187-192. PMID 30563853 DOI: 10.1073/pnas.1718997115  0.2
2011 Wang GZ, Liu J, Wang W, Zhang HY, Lercher MJ. A gene's ability to buffer variation is predicted by its fitness contribution and genetic interactions. Plos One. 6: e17650. PMID 21407817 DOI: 10.1371/journal.pone.0017650  0.199
2010 Weiss M, Schrimpf S, Hengartner MO, Lercher MJ, von Mering C. Shotgun proteomics data from multiple organisms reveals remarkable quantitative conservation of the eukaryotic core proteome. Proteomics. 10: 1297-306. PMID 20077411 DOI: 10.1002/pmic.200900414  0.196
2006 Pál C, Papp B, Lercher MJ. An integrated view of protein evolution. Nature Reviews. Genetics. 7: 337-48. PMID 16619049 DOI: 10.1038/Nrg1838  0.191
2019 Gao NL, Chen J, Wang T, Lercher MJ, Chen WH. Prokaryotic Genome Expansion Is Facilitated by Phages and Plasmids but Impaired by CRISPR. Frontiers in Microbiology. 10: 2254. PMID 31681190 DOI: 10.3389/Fmicb.2019.02254  0.19
2009 Schrimpf SP, Weiss M, Reiter L, Ahrens CH, Jovanovic M, Malmström J, Brunner E, Mohanty S, Lercher MJ, Hunziker PE, Aebersold R, von Mering C, Hengartner MO. Comparative functional analysis of the Caenorhabditis elegans and Drosophila melanogaster proteomes. Plos Biology. 7: e48. PMID 19260763 DOI: 10.1371/journal.pbio.1000048  0.189
2019 Yanai I, Lercher M. What is the question? Genome Biology. 20: 289. PMID 31856863 DOI: 10.1186/S13059-019-1902-1  0.187
2002 Lercher MJ, Hurst LD. Human SNP variability and mutation rate are higher in regions of high recombination. Trends in Genetics : Tig. 18: 337-40. PMID 12127766 DOI: 10.1016/S0168-9525(02)02669-0  0.184
2005 Pál C, Papp B, Lercher MJ. Adaptive evolution of bacterial metabolic networks by horizontal gene transfer. Nature Genetics. 37: 1372-5. PMID 16311593 DOI: 10.1038/Ng1686  0.182
2002 Lercher MJ, Smith NG, Eyre-Walker A, Hurst LD. The evolution of isochores: evidence from SNP frequency distributions. Genetics. 162: 1805-10. PMID 12524350  0.179
2011 Szappanos B, Kovács K, Szamecz B, Honti F, Costanzo M, Baryshnikova A, Gelius-Dietrich G, Lercher MJ, Jelasity M, Myers CL, Andrews BJ, Boone C, Oliver SG, Pál C, Papp B. An integrated approach to characterize genetic interaction networks in yeast metabolism. Nature Genetics. 43: 656-62. PMID 21623372 DOI: 10.1038/Ng.846  0.178
2001 Jacobs A, Bräunlich I, Graf R, Lercher M, Sakaki T, Voges J, Hesselmann V, Brandau W, Wienhard K, Heiss WD. Quantitative kinetics of [124I]FIAU in cat and man. Journal of Nuclear Medicine : Official Publication, Society of Nuclear Medicine. 42: 467-75. PMID 11337525  0.174
2014 Pfeifer B, Wittelsbürger U, Ramos-Onsins SE, Lercher MJ. PopGenome: an efficient Swiss army knife for population genomic analyses in R. Molecular Biology and Evolution. 31: 1929-36. PMID 24739305 DOI: 10.1093/molbev/msu136  0.172
2011 Bräutigam A, Kajala K, Wullenweber J, Sommer M, Gagneul D, Weber KL, Carr KM, Gowik U, Mass J, Lercher MJ, Westhoff P, Hibberd JM, Weber AP. An mRNA blueprint for C4 photosynthesis derived from comparative transcriptomics of closely related C3 and C4 species. Plant Physiology. 155: 142-56. PMID 20543093 DOI: 10.1104/Pp.110.159442  0.171
2011 Chen WH, Wei W, Lercher MJ. Minimal regulatory spaces in yeast genomes. Bmc Genomics. 12: 320. PMID 21679449 DOI: 10.1186/1471-2164-12-320  0.171
2017 Denton AK, Maß J, Külahoglu C, Lercher MJ, Bräutigam A, Weber AP. Freeze-quenched maize mesophyll and bundle sheath separation uncovers bias in previous tissue-specific RNA-Seq data. Journal of Experimental Botany. PMID 28043950 DOI: 10.1093/Jxb/Erw463  0.17
2014 Esser C, Kuhn A, Groth G, Lercher MJ, Maurino VG. Plant and animal glycolate oxidases have a common eukaryotic ancestor and convergently duplicated to evolve long-chain 2-hydroxy acid oxidases. Molecular Biology and Evolution. 31: 1089-101. PMID 24408912 DOI: 10.1093/molbev/msu041  0.17
2013 Gelius-Dietrich G, Desouki AA, Fritzemeier CJ, Lercher MJ. Sybil--efficient constraint-based modelling in R. Bmc Systems Biology. 7: 125. PMID 24224957 DOI: 10.1186/1752-0509-7-125  0.169
2020 Yanai I, Lercher M. The two languages of science. Genome Biology. 21: 147. PMID 32552854 DOI: 10.1186/S13059-020-02057-5  0.168
2005 Hurst LD, Lercher MJ. Unusual linkage patterns of ligands and their cognate receptors indicate a novel reason for non-random gene order in the human genome. Bmc Evolutionary Biology. 5: 62. PMID 16277660 DOI: 10.1186/1471-2148-5-62  0.167
2006 Legube G, McWeeney SK, Lercher MJ, Akhtar A. X-chromosome-wide profiling of MSL-1 distribution and dosage compensation in Drosophila. Genes & Development. 20: 871-83. PMID 16547175 DOI: 10.1101/Gad.377506  0.165
2009 Chen WH, Lercher MJ. ColorTree: a batch customization tool for phylogenic trees. Bmc Research Notes. 2: 155. PMID 19646243 DOI: 10.1186/1756-0500-2-155  0.162
2015 Wittelsbürger U, Pfeifer B, Lercher MJ. WhopGenome: high-speed access to whole-genome variation and sequence data in R. Bioinformatics (Oxford, England). 31: 413-5. PMID 25273104 DOI: 10.1093/bioinformatics/btu636  0.157
2011 Wang GZ, Lercher MJ. The effects of network neighbours on protein evolution. Plos One. 6: e18288. PMID 21532755 DOI: 10.1371/journal.pone.0018288  0.15
2016 Hartleb D, Jarre F, Lercher MJ. Improved Metabolic Models for E. coli and Mycoplasma genitalium from GlobalFit, an Algorithm That Simultaneously Matches Growth and Non-Growth Data Sets. Plos Computational Biology. 12: e1005036. PMID 27482704 DOI: 10.1371/journal.pcbi.1005036  0.149
2022 Balparda M, Schmitz J, Duemmel M, Wuthenow IC, Schmidt M, Alseekh S, Fernie AR, Lercher MJ, Maurino VG. Two plant glyoxalase systems with different evolutionary origins detoxify diverse reactive carbonyl species. Plant Physiology. PMID 36423222 DOI: 10.1093/plphys/kiac526  0.144
2017 Schmitz J, Srikanth NV, Hüdig M, Poschmann G, Lercher MJ, Maurino VG. The ancestors of diatoms evolved a unique mitochondrial dehydrogenase to oxidize photorespiratory glycolate. Photosynthesis Research. PMID 28247236 DOI: 10.1007/s11120-017-0355-1  0.141
2015 Desouki AA, Jarre F, Gelius-Dietrich G, Lercher MJ. CycleFreeFlux: efficient removal of thermodynamically infeasible loops from flux distributions. Bioinformatics (Oxford, England). PMID 25701569 DOI: 10.1093/bioinformatics/btv096  0.139
2016 Szappanos B, Fritzemeier J, Csörgő B, Lázár V, Lu X, Fekete G, Bálint B, Herczeg R, Nagy I, Notebaart RA, Lercher MJ, Pál C, Papp B. Adaptive evolution of complex innovations through stepwise metabolic niche expansion. Nature Communications. 7: 11607. PMID 27197754 DOI: 10.1038/Ncomms11607  0.136
2001 Lercher MJ, Williams EJ, Hurst LD. Local similarity in evolutionary rates extends over whole chromosomes in human-rodent and mouse-rat comparisons: implications for understanding the mechanistic basis of the male mutation bias. Molecular Biology and Evolution. 18: 2032-9. PMID 11606699 DOI: 10.1093/oxfordjournals.molbev.a003744  0.13
2003 Lercher MJ, Hurst LD. Imprinted chromosomal regions of the human genome have unusually high recombination rates. Genetics. 165: 1629-32. PMID 14733198  0.124
2021 Kroll A, Engqvist MKM, Heckmann D, Lercher MJ. Deep learning allows genome-scale prediction of Michaelis constants from structural features. Plos Biology. 19: e3001402. PMID 34665809 DOI: 10.1371/journal.pbio.3001402  0.124
2018 Heckmann D, Lloyd CJ, Mih N, Ha Y, Zielinski DC, Haiman ZB, Desouki AA, Lercher MJ, Palsson BO. Machine learning applied to enzyme turnover numbers reveals protein structural correlates and improves metabolic models. Nature Communications. 9: 5252. PMID 30531987 DOI: 10.1038/S41467-018-07652-6  0.123
2003 Croft LJ, Lercher MJ, Gagen MJ, Mattick JS. Genome Biology. 5: P2. DOI: 10.1186/gb-2003-5-1-p2  0.12
2021 Sundermann EM, Lercher MJ, Heckmann D. Modeling photosynthetic resource allocation connects physiology with evolutionary environments. Scientific Reports. 11: 15979. PMID 34354112 DOI: 10.1038/s41598-021-94903-0  0.115
2019 Singh D, Lercher MJ. Network reduction methods for genome-scale metabolic models. Cellular and Molecular Life Sciences : Cmls. PMID 31748914 DOI: 10.1007/s00018-019-03383-z  0.111
2010 Wang GZ, Lercher MJ. Amino acid composition in endothermic vertebrates is biased in the same direction as in thermophilic prokaryotes. Bmc Evolutionary Biology. 10: 263. PMID 20807394 DOI: 10.1186/1471-2148-10-263  0.109
2013 Heckmann D, Schulze S, Denton A, Gowik U, Westhoff P, Weber AP, Lercher MJ. Predicting C4 photosynthesis evolution: modular, individually adaptive steps on a Mount Fuji fitness landscape. Cell. 153: 1579-88. PMID 23791184 DOI: 10.1016/J.Cell.2013.04.058  0.108
2023 Hu XP, Schroeder S, Lercher MJ. Proteome efficiency of metabolic pathways in increases along the nutrient flow. Msystems. 8: e0076023. PMID 37795991 DOI: 10.1128/msystems.00760-23  0.105
2016 He Z, Zhang H, Gao S, Lercher MJ, Chen WH, Hu S. Evolview v2: an online visualization and management tool for customized and annotated phylogenetic trees. Nucleic Acids Research. PMID 27131786 DOI: 10.1093/Nar/Gkw370  0.104
2017 Fritzemeier CJ, Hartleb D, Szappanos B, Papp B, Lercher MJ. Erroneous energy-generating cycles in published genome scale metabolic networks: Identification and removal. Plos Computational Biology. 13: e1005494. PMID 28419089 DOI: 10.1371/journal.pcbi.1005494  0.101
2019 Alvarez CE, Bovdilova A, Höppner A, Wolff CC, Saigo M, Trajtenberg F, Zhang T, Buschiazzo A, Nagel-Steger L, Drincovich MF, Lercher MJ, Maurino VG. Molecular adaptations of NADP-malic enzyme for its function in C photosynthesis in grasses. Nature Plants. PMID 31235877 DOI: 10.1038/s41477-019-0451-7  0.1
2023 Kroll A, Rousset Y, Hu XP, Liebrand NA, Lercher MJ. Turnover number predictions for kinetically uncharacterized enzymes using machine and deep learning. Nature Communications. 14: 4139. PMID 37438349 DOI: 10.1038/s41467-023-39840-4  0.1
2021 Kim JY, Symeonidi E, Pang TY, Denyer T, Weidauer D, Bezrutczyk M, Miras M, Zöllner N, Hartwig T, Wudick MM, Lercher M, Chen LQ, Timmermans MCP, Frommer WB. Distinct identities of leaf phloem cells revealed by single cell transcriptomics. The Plant Cell. 33: 511-530. PMID 33955487 DOI: 10.1093/plcell/koaa060  0.099
2012 Zhang H, Gao S, Lercher MJ, Hu S, Chen WH. EvolView, an online tool for visualizing, annotating and managing phylogenetic trees. Nucleic Acids Research. 40: W569-72. PMID 22695796 DOI: 10.1093/Nar/Gks576  0.097
2019 Subramanian B, Gao S, Lercher MJ, Hu S, Chen WH. Evolview v3: a webserver for visualization, annotation, and management of phylogenetic trees. Nucleic Acids Research. PMID 31114888 DOI: 10.1093/Nar/Gkz357  0.091
2023 Kroll A, Ranjan S, Engqvist MKM, Lercher MJ. A general model to predict small molecule substrates of enzymes based on machine and deep learning. Nature Communications. 14: 2787. PMID 37188731 DOI: 10.1038/s41467-023-38347-2  0.088
2023 Pang TY, Lercher MJ. Optimal density of bacterial cells. Plos Computational Biology. 19: e1011177. PMID 37307285 DOI: 10.1371/journal.pcbi.1011177  0.085
2020 Hu XP, Dourado H, Schubert P, Lercher MJ. The protein translation machinery is expressed for maximal efficiency in Escherichia coli. Nature Communications. 11: 5260. PMID 33067428 DOI: 10.1038/s41467-020-18948-x  0.085
2016 Li Y, Heckmann D, Lercher MJ, Maurino VG. Combining genetic and evolutionary engineering to establish C4 metabolism in C3 plants. Journal of Experimental Botany. PMID 27660481 DOI: 10.1093/jxb/erw333  0.084
2018 Denton AK, Maß J, Külahoglu C, Lercher MJ, Bräutigam A, Weber APM. Corrigendum: Freeze-quenched maize mesophyll and bundle sheath separation uncovers bias in previous tissue-specific RNA-Seq data. Journal of Experimental Botany. PMID 29873761 DOI: 10.1093/jxb/ery196  0.084
2014 Mallmann J, Heckmann D, Bräutigam A, Lercher MJ, Weber AP, Westhoff P, Gowik U. The role of photorespiration during the evolution of C4 photosynthesis in the genus Flaveria. Elife. 3: e02478. PMID 24935935 DOI: 10.7554/Elife.02478  0.083
2020 Dourado H, Lercher MJ. An analytical theory of balanced cellular growth. Nature Communications. 11: 1226. PMID 32144263 DOI: 10.1038/s41467-020-14751-w  0.081
2012 Laubach T, von Haeseler A, Lercher MJ. TreeSnatcher plus: capturing phylogenetic trees from images. Bmc Bioinformatics. 13: 110. PMID 22624611 DOI: 10.1186/1471-2105-13-110  0.077
2021 Yanai I, Lercher M. The data-hypothesis conversation. Genome Biology. 22: 58. PMID 33568179 DOI: 10.1186/s13059-021-02277-3  0.073
2021 Yanai I, Lercher M. The data-hypothesis conversation. Genome Biology. 22: 58. PMID 33568179 DOI: 10.1186/s13059-021-02277-3  0.073
2023 Dourado H, Liebermeister W, Ebenhöh O, Lercher MJ. Mathematical properties of optimal fluxes in cellular reaction networks at balanced growth. Plos Computational Biology. 19: e1011156. PMID 37279246 DOI: 10.1371/journal.pcbi.1011156  0.072
2021 Dourado H, Mori M, Hwa T, Lercher MJ. On the optimality of the enzyme-substrate relationship in bacteria. Plos Biology. 19: e3001416. PMID 34699521 DOI: 10.1371/journal.pbio.3001416  0.071
2022 Angermayr SA, Pang TY, Chevereau G, Mitosch K, Lercher MJ, Bollenbach T. Growth-mediated negative feedback shapes quantitative antibiotic response. Molecular Systems Biology. 18: e10490. PMID 36124745 DOI: 10.15252/msb.202110490  0.068
2014 Engqvist MK, Eßer C, Maier A, Lercher MJ, Maurino VG. Mitochondrial 2-hydroxyglutarate metabolism. Mitochondrion. 19: 275-81. PMID 24561575 DOI: 10.1016/j.mito.2014.02.009  0.064
2021 Kim JY, Loo EP, Pang TY, Lercher M, Frommer WB, Wudick MM. Cellular export of sugars and amino acids: Role in feeding other cells and organisms. Plant Physiology. PMID 34015139 DOI: 10.1093/plphys/kiab228  0.06
2000 Vollmar S, Wienhard K, Lercher M, Knöss C, Michel C, Treffert J, Schmand M, Casey ME, Newport D, Luk P, Bao J, Nutt R, Heiss WD. BeeHive: Cluster reconstruction of 3-D PET data in a windows NT network using FORE Ieee Nuclear Science Symposium and Medical Imaging Conference. 2: 15/213-15/215.  0.059
2021 Yanai I, Lercher M. Novel predictions arise from contradictions. Genome Biology. 22: 153. PMID 33975619 DOI: 10.1186/s13059-021-02371-6  0.058
2021 Yanai I, Lercher MJ. Iterations of evolution St. Martin's Press, 2021. 288 pp. Science (New York, N.Y.). 374: 828. PMID 34762478 DOI: 10.1126/science.abm0121  0.055
2023 Yanai I, Lercher MJ. Thinking about science Norton, 2023. 464 pp. Science (New York, N.Y.). 382: 653. PMID 37943930 DOI: 10.1126/science.adk5070  0.052
2003 Blondel WC, Lehalle B, Lercher MN, Dumas D, Bensoussan D, Stoltz JF. Rheological properties of healthy and atherosclerotic human arteries. Biorheology. 40: 369-76. PMID 12454428  0.049
2005 Lagergren J, Blanchette M, Delneri D, Kaessmann H, Lercher M, Martin B, Raphael B, Sagot MF, Pesole G, Bashir A, Dubchak I, Durand D, Pinter RY. Lecture Notes in Bioinformatics (Subseries of Lecture Notes in Computer Science): Preface Lecture Notes in Bioinformatics (Subseries of Lecture Notes in Computer Science). 3388: i.  0.044
2023 Yanai I, Lercher MJ. Make science disruptive again. Nature Biotechnology. PMID 36973558 DOI: 10.1038/s41587-023-01736-5  0.04
1993 Lercher MJ, Wheatley JM. Magnetic properties of single layered Cu oxides in the extended t-J model Physica C: Superconductivity and Its Applications. 215: 145-151. DOI: 10.1016/0921-4534(93)90374-Y  0.04
1976 Lercher M. [Plant protoplasts and their application in biological investigations (author's transl)]. Postepy Biochemii. 22: 307-21. PMID 995771  0.038
1994 Lercher MJ, Wienhard K. Scatter correction in 3-D PET. Ieee Transactions On Medical Imaging. 13: 649-57. PMID 18218543 DOI: 10.1109/42.363103  0.035
2022 Yanai I, Lercher M. Improvisational science. Genome Biology. 23: 4. PMID 34980206 DOI: 10.1186/s13059-021-02575-w  0.031
2024 Yanai I, Lercher MJ. It takes two to think. Nature Biotechnology. PMID 38191661 DOI: 10.1038/s41587-023-02074-2  0.03
2002 Wienhard K, Schmand M, Casey ME, Baker K, Bao J, Eriksson L, Jones WF, Knoess C, Lenox M, Lercher M, Luk P, Michel C, Reed JH, Richerzhagen N, Treffert J, et al. The ECAT HRRT: Performance and first clinical application of the new high resolution research tomograph Ieee Transactions On Nuclear Science. 49: 104-110. DOI: 10.1109/TNS.2002.998689  0.029
2019 Yanai I, Lercher M. Night science. Genome Biology. 20: 179. PMID 31462323 DOI: 10.1186/s13059-019-1800-6  0.029
1995 Lercher MJ, Wheatley JM. Umklapp scattering from spin fluctuations in copper oxides. Physical Review. B, Condensed Matter. 52: R7038-R7041. PMID 9979744 DOI: 10.1103/Physrevb.52.R7038  0.028
1998 Claudon M, Lefèvre F, Martin-Bertaux A, Lercher MN, Régent D. Contrast agents and ultrasound exploration of the kidney and its vascularization | Produits de contraste et exploration echographique du rein et de ses vaisseaux Journal D'Echographie Et De Medecine Par Ultrasons. 19: 434-439.  0.028
2020 Yanai I, Lercher M. Renaissance minds in 21st century science. Genome Biology. 21: 67. PMID 32169112 DOI: 10.1186/S13059-020-01985-6  0.028
2000 Lehalle B, Lercher MN, David N, Olivier P, Fiévé G. Value of bone scintiscan for diagnosis of arterial prosthesis infection: preliminary results. Annals of Vascular Surgery. 14: 484-9. PMID 10990559 DOI: 10.1007/s100169910088  0.02
2000 Michel C, Schmand M, Liu X, Sibomana M, Vollmar S, Knöss C, Lercher M, Watson C, Newport D, Casey M, Defrise M, Wienhard K, Heiss WD. Reconstruction strategies for the HRRT Ieee Nuclear Science Symposium and Medical Imaging Conference. 2: 15/207-15/212.  0.019
2022 Yanai I, Lercher MJ. What puzzle are you in? Genome Biology. 23: 179. PMID 36008862 DOI: 10.1186/s13059-022-02748-1  0.011
2021 Moe-Lange J, Gappel NM, Machado M, Wudick MM, Sies CSA, Schott-Verdugo SN, Bonus M, Mishra S, Hartwig T, Bezrutczyk M, Basu D, Farmer EE, Gohlke H, Malkovskiy A, Haswell ES, ... Lercher MJ, et al. Interdependence of a mechanosensitive anion channel and glutamate receptors in distal wound signaling. Science Advances. 7: eabg4298. PMID 34516872 DOI: 10.1126/sciadv.abg4298  0.01
2001 Lercher MJ, Wheatley JM. Breakdown of mode-mode coupling expansion for commensurate itinerant antiferromagnetism in two dimensions Physical Review B - Condensed Matter and Materials Physics. 63: 124031-124033.  0.01
1998 Lercher MJ, Wheatley JM. On the validity of mode - Mode coupling theory Journal of Magnetism and Magnetic Materials. 185: 384-390.  0.01
1994 Lercher MJ, Wheatley JM. Magnetic bilayer coupling in YBa2Cu3O7. Physical Review. B, Condensed Matter. 49: 736-739. PMID 10009355 DOI: 10.1103/PhysRevB.49.736  0.01
1976 Lercher M, Wojciechowski ZA. Localization of plant UDP-glucose:sterol glucosyltransferase in the Golgi membranes Plant Science Letters. 7: 337-340. DOI: 10.1016/0304-4211(76)90090-0  0.01
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