| Year |
Citation |
Score |
| 2017 |
DeBlasio D, Kececioglu J. Learning Parameter-Advising Sets for Multiple Sequence Alignment. Ieee/Acm Transactions On Computational Biology and Bioinformatics. 14: 1028-1041. PMID 28991725 DOI: 10.1109/Tcbb.2015.2430323 |
0.372 |
|
| 2017 |
DeBlasio D, Kececioglu J. Core column prediction for protein multiple sequence alignments. Algorithms For Molecular Biology : Amb. 12: 11. PMID 28435440 DOI: 10.1186/s13015-017-0102-3 |
0.334 |
|
| 2015 |
DeBlasio D, Kececioglu J. Ensemble multiple sequence alignment via advising F1000research. 4. DOI: 10.7490/F1000Research.1110089.1 |
0.519 |
|
| 2014 |
DeBlasio D, Kececioglu J. Learning advisors for multiple sequence alignment F1000research. 5. DOI: 10.7490/F1000Research.1096240.1 |
0.425 |
|
| 2014 |
DeBlasio D, Kececioglu J. Advising multiple sequence alignments F1000research. 5. DOI: 10.7490/F1000Research.1096239.1 |
0.515 |
|
| 2010 |
Kececioglu J, Kim E, Wheeler T. Aligning protein sequences with predicted secondary structure. Journal of Computational Biology : a Journal of Computational Molecular Cell Biology. 17: 561-80. PMID 20377464 DOI: 10.1089/Cmb.2009.0222 |
0.423 |
|
| 2009 |
Kim E, Wheeler T, Kececioglu J. Learning models for aligning protein sequences with predicted secondary structure Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 5541: 512-531. DOI: 10.1007/978-3-642-02008-7_36 |
0.349 |
|
| 2008 |
Kim E, Kececioglu J. Learning scoring schemes for sequence alignment from partial examples. Ieee/Acm Transactions On Computational Biology and Bioinformatics / Ieee, Acm. 5: 546-56. PMID 18989042 DOI: 10.1109/Tcbb.2008.57 |
0.508 |
|
| 2007 |
Wheeler TJ, Kececioglu JD. Multiple alignment by aligning alignments. Bioinformatics (Oxford, England). 23: i559-68. PMID 17646343 DOI: 10.1093/bioinformatics/btm226 |
0.33 |
|
| 2007 |
Kim E, Kececioglu J. Inverse sequence alignment from partial examples Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 4645: 359-370. |
0.479 |
|
| 2004 |
Kececioglu J, Starrett D. Aligning alignments exactly Proceedings of the Annual International Conference On Computational Molecular Biology, Recomb. 8: 85-96. |
0.319 |
|
| 2001 |
Kececioglu J, Yu J. Separating repeats in DNA sequence assembly Proceedings of the Annual International Conference On Computational Molecular Biology, Recomb. 176-183. |
0.356 |
|
| 2000 |
Kececioglu JD, Lenhof HP, Mehlhorn K, Mutzel P, Reinert K, Vingron M. A polyhedral approach to sequence alignment problems Discrete Applied Mathematics. 104: 143-186. |
0.405 |
|
| 1998 |
Ravi R, Kececioglu JD. Approximation algorithms for multiple sequence alignment under a fixed evolutionary tree Discrete Applied Mathematics. 88: 355-366. DOI: 10.1016/S0166-218X(98)00079-1 |
0.354 |
|
| 1998 |
Kececioglu J, Gusfield D. Reconstructing a history of recombinations from a set of sequences Discrete Applied Mathematics. 88: 239-260. DOI: 10.1016/S0166-218X(98)00074-2 |
0.458 |
|
| 1998 |
Kececioglu J, Gusfield D. Reconstructing a history of recombinations from a set of sequences Discrete Applied Mathematics. 88: 239-260. |
0.398 |
|
| 1997 |
Taylor EW, Bhat A, Nadimpalli RG, Zhang W, Kececioglu J. HIV-1 encodes a sequence overlapping env gp41 with highly significant similarity to selenium-dependent glutathione peroxidases. Journal of Acquired Immune Deficiency Syndromes and Human Retrovirology : Official Publication of the International Retrovirology Association. 15: 393-4. PMID 9342263 DOI: 10.1097/00042560-199708150-00013 |
0.329 |
|
| 1997 |
Nadimpalli R, Zhang W, Kececioglu J, Taylor E. The HIV-1 nef transframe protein has significant sequence and structural similarity to chemokines, as assessed by threading (inverse folding), sequence analysis, and molecular modeling Antiviral Research. 34: A57. DOI: 10.1016/S0166-3542(97)83193-2 |
0.364 |
|
| 1997 |
Kececioglu J, Li M, Tromp J. Inferring a DNA sequence from erroneous copies Theoretical Computer Science. 185: 3-13. |
0.366 |
|
| 1997 |
Reinert K, Lenhof HP, Mutzel P, Mehlhorn K, Kececioglu JD. Branch-and-cut algorithm for multiple sequence alignment Proceedings of Thr Annual International Conference On Computational Molecular Biology, Recomb. 241-250. |
0.392 |
|
| 1996 |
SANKOFF D, SUNDARAM G, KECECIOGLU J. STEINER POINTS IN THE SPACE OF GENOME REARRANGEMENTS International Journal of Foundations of Computer Science. 7: 1-9. DOI: 10.1142/S0129054196000026 |
0.431 |
|
| 1995 |
Kececioglu JD, Myers EW. Combinatorial algorithms for DNA sequence assembly Algorithmica. 13: 7-51. DOI: 10.1007/Bf01188580 |
0.514 |
|
| 1995 |
Gupta SK, Kececioglu JD, Schäffer AA. Making the shortest-paths approach to Sum-of-Pairs multiple sequence alignment more space efficient in practice (Extended Abstract) Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 937: 128-143. DOI: 10.1007/3-540-60044-2_39 |
0.327 |
|
| 1989 |
Lipman DJ, Altschul SF, Kececioglu JD. A tool for multiple sequence alignment. Proceedings of the National Academy of Sciences of the United States of America. 86: 4412-5. PMID 2734293 |
0.465 |
|
| Show low-probability matches. |