Gavin J.P. Naylor - Publications

Affiliations: 
Florida State University, Tallahassee, FL, United States 
Area:
Phylogenetics

50 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2017 Corrigan S, Maisano Delser P, Eddy C, Duffy C, Yang L, Li C, Bazinet AL, Mona S, Naylor GJ. Historical introgression drives pervasive mitochondrial admixture between two species of pelagic sharks. Molecular Phylogenetics and Evolution. PMID 28286223 DOI: 10.1016/J.Ympev.2017.03.011  0.337
2016 Weigmann S, Ebert DA, Clerkin PJ, Stehmann MF, Naylor GJ. Bythaelurus bachi n. sp., a new deep-water catshark (Carcharhiniformes, Scyliorhinidae) from the southwestern Indian Ocean, with a review of Bythaelurus species and a key to their identification. Zootaxa. 4208: zootaxa.4208.5.1. PMID 28006803 DOI: 10.11646/Zootaxa.4208.5.1  0.306
2016 White WT, Last PR, Naylor GJ. Rhinobatos manai sp. nov., a new species of guitarfish (Rhinopristiformes: Rhinobatidae) from New Ireland, Papua New Guinea. Zootaxa. 4175: 588-600. PMID 27811742 DOI: 10.11646/Zootaxa.4175.6.6  0.303
2016 Maisano Delser P, Corrigan S, Hale M, Li C, Veuille M, Planes S, Naylor G, Mona S. Population genomics of C. melanopterus using target gene capture data: demographic inferences and conservation perspectives. Scientific Reports. 6: 33753. PMID 27651217 DOI: 10.1038/Srep33753  0.376
2016 Last PR, White WT, Naylor G. Three new stingrays (Myliobatiformes: Dasyatidae) from the Indo-West Pacific. Zootaxa. 4147: 377-402. PMID 27515624 DOI: 10.11646/Zootaxa.4147.4.2  0.328
2016 Last PR, Henderson AC, Naylor GJ. Acroteriobatus omanensis (Batoidea: Rhinobatidae), a new guitarfish from the Gulf of Oman. Zootaxa. 4144: 276-86. PMID 27470854 DOI: 10.11646/Zootaxa.4144.2.9  0.325
2016 Last PR, Naylor GJ, Manjaji-Matsumoto BM. A revised classification of the family Dasyatidae (Chondrichthyes: Myliobatiformes) based on new morphological and molecular insights. Zootaxa. 4139: 345-68. PMID 27470808 DOI: 10.11646/Zootaxa.4139.3.2  0.392
2016 Séret B, Naylor GJ. Rhynchorhina mauritaniensis, a new genus and species of wedgefish from the eastern central Atlantic (Elasmobranchii: Batoidea: Rhinidae). Zootaxa. 4138: 291-308. PMID 27470765 DOI: 10.11646/Zootaxa.4138.2.4  0.351
2016 Last PR, Séret B, Naylor GJ. A new species of guitarfish, Rhinobatos borneensis sp. nov. with a redefinition of the family-level classification in the order Rhinopristiformes (Chondrichthyes: Batoidea). Zootaxa. 4117: 451-75. PMID 27395187 DOI: 10.11646/Zootaxa.4117.4.1  0.338
2016 Benestan L, Ferchaud AL, Hohenlohe P, Garner BA, Naylor GJ, Baums I, Schwartz M, Kelley JL, Luikart G. Conservation genomics of natural and managed populations: building a conceptual and practical framework. Molecular Ecology. PMID 27086132 DOI: 10.1111/Mec.13647  0.321
2015 Kemper JM, Naylor GJ. The complete mitochondrial genome and phylogenetic position of the Philippines spurdog, Squalus montalbani. Mitochondrial Dna. 1-2. PMID 26539656 DOI: 10.3109/19401736.2015.1101544  0.366
2015 Li C, Corrigan S, Yang L, Straube N, Harris M, Hofreiter M, White WT, Naylor GJ. DNA capture reveals transoceanic gene flow in endangered river sharks. Proceedings of the National Academy of Sciences of the United States of America. PMID 26460025 DOI: 10.1073/Pnas.1508735112  0.367
2015 Straube N, Li C, Claes JM, Corrigan S, Naylor GJ. Molecular phylogeny of Squaliformes and first occurrence of bioluminescence in sharks. Bmc Evolutionary Biology. 15: 162. PMID 26277575 DOI: 10.1186/S12862-015-0446-6  0.411
2015 Doyle VP, Young RE, Naylor GJ, Brown JM. Can we identify genes with increased phylogenetic reliability? Systematic Biology. PMID 26099258 DOI: 10.1093/Sysbio/Syv041  0.347
2015 DeHart HM, Yang L, Naylor GJ. Mitogenomic sequence and phylogenetic placement of the Hortle's whipray Himantura hortlei (Elasmobranchii: Dasyatidae). Mitochondrial Dna. 1-3. PMID 26016876 DOI: 10.3109/19401736.2015.1030632  0.429
2015 Grace MA, Doosey MH, Bart HL, Naylor GJ. First record of Mollisquama sp. (Chondrichthyes: Squaliformes: Dalatiidae) from the Gulf of Mexico, with a morphological comparison to the holotype description of Mollisquama parini Dolganov. Zootaxa. 3948: 587-600. PMID 25947789 DOI: 10.11646/Zootaxa.3948.3.10  0.333
2014 Duckett DJ, Naylor GJ. The complete mitochondrial genome of the endangered spotback skate, Atlantoraja castelnaui. Mitochondrial Dna. 1-2. PMID 25418618 DOI: 10.3109/19401736.2014.982566  0.359
2014 Feutry P, Kyne PM, Pillans RD, Chen X, Naylor GJ, Grewe PM. Mitogenomics of the Speartooth Shark challenges ten years of control region sequencing. Bmc Evolutionary Biology. 14: 232. PMID 25406508 DOI: 10.1186/S12862-014-0232-X  0.391
2014 Corrigan S, Yang L, Cosmann PJ, Naylor GJ. A description of the mitogenome of the Endangered Taiwanese angelshark, Squatina formosa. Mitochondrial Dna. 1-2. PMID 25090398 DOI: 10.3109/19401736.2014.945568  0.399
2014 Yang L, Naylor GJ. Long-PCR based next generation sequencing of the whole mitochondrial genome of the peacock skate Pavoraja nitida (Elasmobranchii: Arhynchobatidae). Mitochondrial Dna. 1-2. PMID 24938110 DOI: 10.3109/19401736.2014.926497  0.449
2014 Yang L, Matthes-Rosana KA, Naylor GJ. Determination of complete mitochondrial genome sequence from the holotype of the southern Mandarin dogfish Cirrhigaleus australis (Elasmobranchii: Squalidae). Mitochondrial Dna. PMID 24725011 DOI: 10.3109/19401736.2014.908360  0.432
2014 Yang L, Matthes-Rosana KA, Naylor GJ. Complete mitochondrial genome of the blacknose shark Carcharhinus acronotus (Elasmobranchii: Carcharhinidae). Mitochondrial Dna. PMID 24450722 DOI: 10.3109/19401736.2013.878928  0.395
2014 Maisey JG, Turner S, Naylor GJ, Miller RF. Dental patterning in the earliest sharks: Implications for tooth evolution. Journal of Morphology. 275: 586-96. PMID 24347366 DOI: 10.1002/Jmor.20242  0.348
2014 Last PR, Corrigan S, Naylor G. Rhinobatos whitei, a new shovelnose ray (Batoidea: Rhinobatidae) from the Philippine Archipelago Zootaxa. 3872: 31-47. DOI: 10.11646/Zootaxa.3872.1.3  0.306
2013 Ebert DA, White WT, Ho HC, Last PR, Nakaya K, Séret B, Straube N, Naylor GJ, De Carvalho MR. An annotated checklist of the chondrichthyans of Taiwan. Zootaxa. 3752: 279-386. PMID 25229120 DOI: 10.11646/Zootaxa.3752.1.17  0.315
2013 Straube N, White WT, Ho HC, Rochel E, Corrigan S, Li C, Naylor GJ. A DNA sequence-based identification checklist for Taiwanese chondrichthyans. Zootaxa. 3752: 256-78. PMID 25229119 DOI: 10.11646/Zootaxa.3752.1.16  0.462
2013 White WT, Ebert DA, Naylor GJ, Ho HC, Clerkin P, Veríssimo A, Cotton CF. Revision of the genus Centrophorus (Squaliformes: Centrophoridae): Part 1--Redescription of Centrophorus granulosus (Bloch & Schneider), a senior synonym of C. acus Garman and C. niaukang Teng. Zootaxa. 3752: 35-72. PMID 25229108 DOI: 10.11646/Zootaxa.3752.1.5  0.304
2013 Li C, Hofreiter M, Straube N, Corrigan S, Naylor GJ. Capturing protein-coding genes across highly divergent species. Biotechniques. 54: 321-6. PMID 23758502 DOI: 10.2144/000114039  0.43
2012 Li C, Riethoven JJ, Naylor GJ. EvolMarkers: a database for mining exon and intron markers for evolution, ecology and conservation studies. Molecular Ecology Resources. 12: 967-71. PMID 22805179 DOI: 10.1111/J.1755-0998.2012.03167.X  0.387
2012 Liberles DA, Teichmann SA, Bahar I, Bastolla U, Bloom J, Bornberg-Bauer E, Colwell LJ, de Koning AP, Dokholyan NV, Echave J, Elofsson A, Gerloff DL, Goldstein RA, Grahnen JA, Holder MT, ... ... Naylor G, et al. The interface of protein structure, protein biophysics, and molecular evolution. Protein Science : a Publication of the Protein Society. 21: 769-85. PMID 22528593 DOI: 10.1002/Pro.2071  0.705
2012 Li C, Matthes-Rosana KA, Garcia M, Naylor GJ. Phylogenetics of Chondrichthyes and the problem of rooting phylogenies with distant outgroups. Molecular Phylogenetics and Evolution. 63: 365-73. PMID 22300842 DOI: 10.1016/J.Ympev.2012.01.013  0.416
2012 Aschliman NC, Nishida M, Miya M, Inoue JG, Rosana KM, Naylor GJ. Body plan convergence in the evolution of skates and rays (Chondrichthyes: Batoidea). Molecular Phylogenetics and Evolution. 63: 28-42. PMID 22209858 DOI: 10.1016/J.Ympev.2011.12.012  0.395
2011 Lakner C, Holder MT, Goldman N, Naylor GJ. What's in a likelihood? Simple models of protein evolution and the contribution of structurally viable reconstructions to the likelihood. Systematic Biology. 60: 161-74. PMID 21233085 DOI: 10.1093/Sysbio/Syq088  0.729
2009 Castoe TA, de Koning AP, Kim HM, Gu W, Noonan BP, Naylor G, Jiang ZJ, Parkinson CL, Pollock DD. Evidence for an ancient adaptive episode of convergent molecular evolution. Proceedings of the National Academy of Sciences of the United States of America. 106: 8986-91. PMID 19416880 DOI: 10.1073/Pnas.0900233106  0.431
2008 Coolen M, Menuet A, Chassoux D, Compagnucci C, Henry S, Lévèque L, Da Silva C, Gavory F, Samain S, Wincker P, Thermes C, D'Aubenton-Carafa Y, Rodriguez-Moldes I, Naylor G, Depew M, et al. The Dogfish Scyliorhinus canicula: A Reference in Jawed Vertebrates. Csh Protocols. 2008: pdb.emo111. PMID 21356737 DOI: 10.1101/Pdb.Emo111  0.406
2008 Min D, Josephine HR, Li H, Lakner C, MacPherson IS, Naylor GJ, Swofford D, Hedstrom L, Yang W. An enzymatic atavist revealed in dual pathways for water activation. Plos Biology. 6: e206. PMID 18752347 DOI: 10.1371/Journal.Pbio.0060206  0.689
2006 López JA, Ryburn JA, Fedrigo O, Naylor GJ. Phylogeny of sharks of the family Triakidae (Carcharhiniformes) and its implications for the evolution of carcharhiniform placental viviparity. Molecular Phylogenetics and Evolution. 40: 50-60. PMID 16564708 DOI: 10.1016/J.Ympev.2006.02.011  0.711
2005 Collins TM, Fedrigo O, Naylor GJ. Choosing the best genes for the job: the case for stationary genes in genome-scale phylogenetics. Systematic Biology. 54: 493-500. PMID 16012114 DOI: 10.1080/10635150590947339  0.705
2005 Krenz JG, Naylor GJ, Shaffer HB, Janzen FJ. Molecular phylogenetics and evolution of turtles. Molecular Phylogenetics and Evolution. 37: 178-91. PMID 15964217 DOI: 10.1016/J.Ympev.2005.04.027  0.439
2005 Fedrigo O, Adams DC, Naylor GJ. DRUIDS--detection of regions with unexpected internal deviation from stationarity. Journal of Experimental Zoology. Part B, Molecular and Developmental Evolution. 304: 119-28. PMID 15706597 DOI: 10.1002/Jez.B.21032  0.648
2004 Fedrigo O, Naylor G. A gene-specific DNA sequencing chip for exploring molecular evolutionary change. Nucleic Acids Research. 32: 1208-13. PMID 14973200 DOI: 10.1093/Nar/Gkh210  0.653
2001 Tavaré S, Adams DC, Fedrigo O, Naylor GJ. A model for phylogenetic inference using structural and chemical covariates. Pacific Symposium On Biocomputing. Pacific Symposium On Biocomputing. 215-25. PMID 11262942  0.671
2000 Naylor GJ, Gerstein M. Measuring shifts in function and evolutionary opportunity using variability profiles: a case study of the globins. Journal of Molecular Evolution. 51: 223-33. PMID 11029067 DOI: 10.1007/S002390010084  0.363
1999 Grundy WN, Naylor GJ. Phylogenetic inference from conserved sites alignments. The Journal of Experimental Zoology. 285: 128-39. PMID 10440724 DOI: 10.1002/(Sici)1097-010X(19990815)285:2<128::Aid-Jez5>3.0.Co;2-C  0.442
1998 Naylor GJ, Brown WM. Amphioxus mitochondrial DNA, chordate phylogeny, and the limits of inference based on comparisons of sequences. Systematic Biology. 47: 61-76. PMID 12064241 DOI: 10.1080/106351598261030  0.671
1998 Voytas DF, Naylor GJ. Rapid flux in plant genomes. Nature Genetics. 20: 6-7. PMID 9731519 DOI: 10.1038/1652  0.305
1997 Naylor GJ, Brown WM. Structural biology and phylogenetic estimation. Nature. 388: 527-8. PMID 9252184 DOI: 10.1038/41460  0.644
1995 Naylor GJ, Collins TM, Brown WM. Hydrophobicity and phylogeny. Nature. 373: 565-6. PMID 7854410 DOI: 10.1038/373565B0  0.641
1995 Naylor G, Kraus F. The relationship between s and m and the retention index Systematic Biology. 44: 559-562. DOI: 10.1093/Sysbio/44.4.559  0.442
1992 Martin AP, Naylor GJ, Palumbi SR. Rates of mitochondrial DNA evolution in sharks are slow compared with mammals. Nature. 357: 153-5. PMID 1579163 DOI: 10.1038/357153A0  0.405
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