Leonardo Daniel Arbiza, PhD - Publications

Affiliations: 
Bioinformatics and Genomics CIPF, Toronto, Ontario, Canada 

21 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2016 Pinto Y, Gabay O, Arbiza L, Sams AJ, Keinan A, Levanon EY. Clustered mutations in hominid genome evolution are consistent with APOBEC3G enzymatic activity. Genome Research. PMID 27056836 DOI: 10.1101/Gr.199240.115  0.359
2016 Rodriguez-Flores J, Fakhro K, Agosto-Perez F, Ramstetter M, Arbiza L, Vincent T, Robay A, Malek J, Suhre K, Chouchane L, Badii R, Al-Nabet Al-Marri A, Abi Khalil C, Zirie M, Jayyousi A, et al. Indigenous Arabs are descendants of the earliest split from ancient Eurasian populations. Genome Research. PMID 26728717 DOI: 10.1101/Gr.191478.115  0.353
2015 Slavney A, Arbiza L, Clark AG, Keinan A. Strong constraint on human genes escaping X-inactivation is modulated by their expression level and breadth in both sexes. Molecular Biology and Evolution. PMID 26494842 DOI: 10.1093/Molbev/Msv225  0.461
2015 Yu F, Lu J, Liu X, Gazave E, Chang D, Raj S, Hunter-Zinck H, Blekhman R, Arbiza L, Van Hout C, Morrison A, Johnson AD, Bis J, Cupples LA, Psaty BM, et al. Population genomic analysis of 962 whole genome sequences of humans reveals natural selection in non-coding regions. Plos One. 10: e0121644. PMID 25807536 DOI: 10.1371/Journal.Pone.0121644  0.471
2014 Siepel A, Arbiza L. Cis-regulatory elements and human evolution Current Opinion in Genetics & Development. 29: 81-89. PMID 25218861 DOI: 10.1016/J.Gde.2014.08.011  0.443
2014 Arbiza L, Gottipati S, Siepel A, Keinan A. Contrasting X-linked and autosomal diversity across 14 human populations. American Journal of Human Genetics. 94: 827-44. PMID 24836452 DOI: 10.1016/J.Ajhg.2014.04.011  0.335
2013 Arbiza L, Gronau I, Aksoy BA, Hubisz MJ, Gulko B, Keinan A, Siepel A. Genome-wide inference of natural selection on human transcription factor binding sites Nature Genetics. 45: 723-729. PMID 23749186 DOI: 10.1038/Ng.2658  0.488
2013 Gronau I, Arbiza L, Mohammed J, Siepel A. Inference of natural selection from interspersed genomic elements based on polymorphism and divergence. Molecular Biology and Evolution. 30: 1159-71. PMID 23386628 DOI: 10.1093/Molbev/Mst019  0.483
2012 Arbiza L, Zhong E, Keinan A. NRE: a tool for exploring neutral loci in the human genome Bmc Bioinformatics. 13: 301-301. PMID 23151206 DOI: 10.1186/1471-2105-13-301  0.432
2012 Lavagnino N, Serra F, Arbiza L, Dopazo H, Hasson E. Evolutionary Genomics of Genes Involved in Olfactory Behavior in the Drosophila melanogaster Species Group. Evolutionary Bioinformatics Online. 8: 89-104. PMID 22346339 DOI: 10.4137/Ebo.S8484  0.716
2011 Arbiza L, Patricio M, Dopazo H, Posada D. Genome-wide heterogeneity of nucleotide substitution model fit. Genome Biology and Evolution. 3: 896-908. PMID 21824869 DOI: 10.1093/Gbe/Evr080  0.693
2011 Gottipati S, Arbiza L, Siepel A, Clark AG, Keinan A. Analyses of X-linked and autosomal genetic variation in population-scale whole genome sequencing. Nature Genetics. 43: 741-3. PMID 21775991 DOI: 10.1038/Ng.877  0.449
2011 Serra F, Arbiza L, Dopazo J, Dopazo H. Natural selection on functional modules, a genome-wide analysis. Plos Computational Biology. 7: e1001093. PMID 21390268 DOI: 10.1371/Journal.Pcbi.1001093  0.754
2009 Martin-Coello J, Dopazo H, Arbiza L, Ausió J, Roldan ERS, Gomendio M. Sexual selection drives weak positive selection in protamine genes and high promoter divergence, enhancing sperm competitiveness Proceedings of the Royal Society B: Biological Sciences. 276: 2427-2436. PMID 19364735 DOI: 10.1098/Rspb.2009.0257  0.701
2008 Capriotti E, Arbiza L, Casadio R, Dopazo J, Dopazo H, Marti-Renom MA. Use of estimated evolutionary strength at the codon level improves the prediction of disease-related protein mutations in humans Human Mutation. 29: 198-204. PMID 17935148 DOI: 10.1002/Humu.20628  0.683
2007 Tárraga J, Medina I, Arbiza L, Huerta-Cepas J, Gabaldón T, Dopazo J, Dopazo H. Phylemon: a suite of web tools for molecular evolution, phylogenetics and phylogenomics. Nucleic Acids Research. 35: W38-42. PMID 17452346 DOI: 10.1093/Nar/Gkm224  0.696
2007 Al-Shahrour F, Arbiza L, Dopazo H, Huerta-Cepas J, Mínguez P, Montaner D, Dopazo J. From genes to functional classes in the study of biological systems. Bmc Bioinformatics. 8: 114. PMID 17407596 DOI: 10.1186/1471-2105-8-114  0.704
2006 Conde L, Vaquerizas JM, Dopazo H, Arbiza L, Reumers J, Rousseau F, Schymkowitz J, Dopazo J. PupaSuite: finding functional single nucleotide polymorphisms for large-scale genotyping purposes. Nucleic Acids Research. 34: W621-5. PMID 16845085 DOI: 10.1093/Nar/Gkl071  0.655
2006 Arbiza L, Dopazo J, Dopazo H. Positive selection, relaxation, and acceleration in the evolution of the human and chimp genome Plos Computational Biology. 2: 288-300. PMID 16683019 DOI: 10.1371/Journal.Pcbi.0020038  0.747
2006 Arbiza L, Duchi S, Montaner D, Burguet J, Pantoja-Uceda D, Pineda-Lucena A, Dopazo J, Dopazo H. Selective Pressures at a Codon-level Predict Deleterious Mutations in Human Disease Genes Journal of Molecular Biology. 358: 1390-1404. PMID 16584746 DOI: 10.1016/J.Jmb.2006.02.067  0.723
2005 Arbiza L, Dopazo J, Dopazo HJ. Differentiating Positive Selection from Acceleration and Relaxation in Human and Chimp Plos Computational Biology. DOI: 10.1371/Journal.Pcbi.0020038.Eor  0.665
Show low-probability matches.