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James W. Baurley, Ph.D. - Publications

Affiliations: 
2010 Biostatistics University of Southern California, Los Angeles, CA, United States 
Area:
Biostatistics Biology, Bioinformatics Biology
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26 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Bouras E, Kim AE, Lin Y, Morrison J, Du M, Albanes D, Barry EL, Baurley JW, Berndt SI, Bien SA, Bishop TD, Brenner H, Budiarto A, Burnett-Hartman A, Campbell PT, et al. Genome-wide interaction analysis of folate for colorectal cancer risk. The American Journal of Clinical Nutrition. PMID 37640106 DOI: 10.1016/j.ajcnut.2023.08.010  0.497
2023 Dimou N, Kim AE, Flanagan O, Murphy N, Diez-Obrero V, Shcherbina A, Aglago EK, Bouras E, Campbell PT, Casey G, Gallinger S, Gruber SB, Jenkins MA, Lin Y, Moreno V, ... ... Baurley JW, et al. Probing the diabetes and colorectal cancer relationship using gene - environment interaction analyses. British Journal of Cancer. PMID 37365285 DOI: 10.1038/s41416-023-02312-z  0.479
2023 Aglago EK, Kim AE, Lin Y, Qu C, Evangelou M, Ren Y, Morrison J, Albanes D, Arndt V, Barry EL, Baurley JW, Berndt SI, Bien SA, Bishop DT, Bouras E, et al. A genetic locus within the FMN1/GREM1 gene region interacts with body mass index in colorectal cancer risk. Cancer Research. PMID 37249599 DOI: 10.1158/0008-5472.CAN-22-3713  0.48
2022 Carreras-Torres R, Kim AE, Lin Y, Díez-Obrero V, Bien SA, Qu C, Wang J, Dimou N, Aglago EK, Albanes D, Arndt V, Baurley JW, Berndt SI, Bézieau S, Bishop DT, et al. Genome-wide interaction study with smoking for colorectal cancer risk identifies novel genetic loci related to tumor suppression, inflammation and immune response. Cancer Epidemiology, Biomarkers & Prevention : a Publication of the American Association For Cancer Research, Cosponsored by the American Society of Preventive Oncology. PMID 36576985 DOI: 10.1158/1055-9965.EPI-22-0763  0.47
2022 Tian Y, Kim AE, Bien SA, Lin Y, Qu C, Harrison T, Carreras-Torres R, Díez-Obrero V, Dimou N, Drew DA, Hidaka A, Huyghe JR, Jordahl KM, Morrison J, Murphy N, ... ... Baurley J, et al. Genome-Wide Interaction Analysis of Genetic Variants with Menopausal Hormone Therapy for Colorectal Cancer Risk. Journal of the National Cancer Institute. PMID 35512400 DOI: 10.1093/jnci/djac094  0.481
2022 Jordahl KM, Shcherbina A, Kim AE, Su YR, Lin Y, Wang J, Qu C, Albanes D, Arndt V, Baurley JW, Berndt SI, Bien SA, Bishop DT, Bouras E, Brenner H, et al. Beyond GWAS of Colorectal Cancer: Evidence of Interaction with Alcohol Consumption and Putative Causal Variant for the 10q24.2 Region. Cancer Epidemiology, Biomarkers & Prevention : a Publication of the American Association For Cancer Research, Cosponsored by the American Society of Preventive Oncology. OF1-OF13. PMID 35438744 DOI: 10.1158/1055-9965.EPI-21-1003  0.451
2021 Yusuf I, Pardamean B, Baurley JW, Budiarto A, Miskad UA, Lusikooy RE, Arsyad A, Irwan A, Mathew G, Suriapranata I, Kusuma R, Kacamarga MF, Cenggoro TW, McMahan C, Joyner C, et al. Genetic risk factors for colorectal cancer in multiethnic Indonesians. Scientific Reports. 11: 9988. PMID 33976257 DOI: 10.1038/s41598-021-88805-4  0.323
2019 Joyner C, McMahan C, Baurley J, Pardamean B. A two-phase Bayesian methodology for the analysis of binary phenotypes in genome-wide association studies. Biometrical Journal. Biometrische Zeitschrift. PMID 31482590 DOI: 10.1002/Bimj.201900050  0.391
2019 Cenggoro TW, Mahesworo B, Budiarto A, Baurley J, Suparyanto T, Pardamean B. Features Importance in Classification Models for Colorectal Cancer Cases Phenotype in Indonesia Procedia Computer Science. 157: 313-320. DOI: 10.1016/J.Procs.2019.08.172  0.407
2017 McMahan C, Baurley J, Bridges W, Joyner C, Kacamarga MF, Lund R, Pardamean C, Pardamean B. A Bayesian hierarchical model for identifying significant polygenic effects while controlling for confounding and repeated measures. Statistical Applications in Genetics and Molecular Biology. PMID 29140792 DOI: 10.1515/Sagmb-2017-0044  0.358
2017 Chen LS, Zawertailo L, Piasecki TM, Kaprio J, Foreman M, Elliott HR, David SP, Bergen AW, Baurley JW, Tyndale RF, Baker TB, Bierut LJ, Saccone NL. Leveraging genomic data in smoking cessation trials in the era of Precision Medicine: Why and how. Nicotine & Tobacco Research : Official Journal of the Society For Research On Nicotine and Tobacco. PMID 28498934 DOI: 10.1093/Ntr/Ntx097  0.318
2016 Baurley JW, Edlund CK, Pardamean CI, Conti DV, Krasnow R, Javitz HS, Hops H, Swan GE, Benowitz NL, Bergen AW. Genome-wide association of the laboratory-based nicotine metabolite ratio in three ancestries. Nicotine & Tobacco Research : Official Journal of the Society For Research On Nicotine and Tobacco. PMID 27113016 DOI: 10.1093/Ntr/Ntw117  0.306
2016 Baurley JW, Edlund CK, Pardamean CI, Conti DV, Bergen AW. Smokescreen: a targeted genotyping array for addiction research. Bmc Genomics. 17: 145. PMID 26921259 DOI: 10.1186/S12864-016-2495-7  0.339
2015 Bergen AW, Michel M, Nishita D, Krasnow R, Javitz HS, Conneely KN, Lessov-Schlaggar CN, Hops H, Zhu AZ, Baurley JW, McClure JB, Hall SM, Baker TB, Conti DV, Benowitz NL, et al. Drug Metabolizing Enzyme and Transporter Gene Variation, Nicotine Metabolism, Prospective Abstinence, and Cigarette Consumption. Plos One. 10: e0126113. PMID 26132489 DOI: 10.1371/Journal.Pone.0126113  0.366
2014 Figueiredo JC, Ly S, Raimondi H, Magee K, Baurley JW, Sanchez-Lara PA, Ihenacho U, Yao C, Edlund CK, van den Berg D, Casey G, DeClerk YA, Samet JM, Magee W. Genetic risk factors for orofacial clefts in Central Africans and Southeast Asians. American Journal of Medical Genetics. Part A. 164: 2572-80. PMID 25099202 DOI: 10.1002/Ajmg.A.36693  0.336
2013 Baurley JW, Conti DV. A scalable, knowledge-based analysis framework for genetic association studies. Bmc Bioinformatics. 14: 312. PMID 24152222 DOI: 10.1186/1471-2105-14-312  0.366
2013 Figueiredo JC, Levine AJ, Crott JW, Baurley J, Haile RW. Folate-genetics and colorectal neoplasia: what we know and need to know next. Molecular Nutrition & Food Research. 57: 607-27. PMID 23401104 DOI: 10.1002/Mnfr.201200278  0.335
2012 Myers RA, Himes BE, Gignoux CR, Yang JJ, Gauderman WJ, Rebordosa C, Xie J, Torgerson DG, Levin AM, Baurley J, Graves PE, Mathias RA, Romieu I, Roth LA, Conti D, et al. Further replication studies of the EVE Consortium meta-analysis identifies 2 asthma risk loci in European Americans. The Journal of Allergy and Clinical Immunology. 130: 1294-301. PMID 23040885 DOI: 10.1016/J.Jaci.2012.07.054  0.397
2011 Torgerson DG, Ampleford EJ, Chiu GY, Gauderman WJ, Gignoux CR, Graves PE, Himes BE, Levin AM, Mathias RA, Hancock DB, Baurley JW, Eng C, Stern DA, Celedón JC, Rafaels N, et al. Meta-analysis of genome-wide association studies of asthma in ethnically diverse North American populations. Nature Genetics. 43: 887-92. PMID 21804549 DOI: 10.1038/Ng.888  0.35
2010 Wilson MA, Baurley JW, Thomas DC, Conti DV. Complex system approaches to genetic analysis Bayesian approaches. Advances in Genetics. 72: 47-71. PMID 21029848 DOI: 10.1016/B978-0-12-380862-2.00003-5  0.514
2010 Baurley JW, Conti DV, Gauderman WJ, Thomas DC. Discovery of complex pathways from observational data. Statistics in Medicine. 29: 1998-2011. PMID 20683892 DOI: 10.1002/Sim.3962  0.506
2009 Thomas DC, Conti DV, Baurley J, Nijhout F, Reed M, Ulrich CM. Use of pathway information in molecular epidemiology. Human Genomics. 4: 21-42. PMID 21072972 DOI: 10.1186/1479-7364-4-1-21  0.508
2009 Engelman CD, Baurley JW, Chiu YF, Joubert BR, Lewinger JP, Maenner MJ, Murcray CE, Shi G, Gauderman WJ. Detecting gene-environment interactions in genome-wide association data. Genetic Epidemiology. 33: S68-73. PMID 19924704 DOI: 10.1002/Gepi.20475  0.369
2009 Himes BE, Hunninghake GM, Baurley JW, Rafaels NM, Sleiman P, Strachan DP, Wilk JB, Willis-Owen SA, Klanderman B, Lasky-Su J, Lazarus R, Murphy AJ, Soto-Quiros ME, Avila L, Beaty T, et al. Genome-wide association analysis identifies PDE4D as an asthma-susceptibility gene. American Journal of Human Genetics. 84: 581-93. PMID 19426955 DOI: 10.1016/J.Ajhg.2009.04.006  0.322
2008 Thomas DC, Baurley JW, Brown EE, Figueiredo JC, Goldstein A, Hazra A, Wilson RT, Rothman N. Approaches to complex pathways in molecular epidemiology: summary of a special conference of the American Association for Cancer Research. Cancer Research. 68: 10028-30. PMID 19074865 DOI: 10.1158/0008-5472.Can-08-1690  0.522
2007 Lewinger JP, Conti DV, Baurley JW, Triche TJ, Thomas DC. Hierarchical Bayes prioritization of marker associations from a genome-wide association scan for further investigation. Genetic Epidemiology. 31: 871-82. PMID 17654612 DOI: 10.1002/Gepi.20248  0.472
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