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Chi H. Ngan, Ph.D. - Publications

Affiliations: 
2012 Boston University, Boston, MA, United States 
Area:
Biomedical Engineering
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10 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2013 Lavi A, Ngan CH, Movshovitz-Attias D, Bohnuud T, Yueh C, Beglov D, Schueler-Furman O, Kozakov D. Detection of peptide-binding sites on protein surfaces: the first step toward the modeling and targeting of peptide-mediated interactions. Proteins. 81: 2096-105. PMID 24123488 DOI: 10.1002/Prot.24422  0.666
2013 Bohnuud T, Beglov D, Ngan C, Zerbe B, Hall D, Brenke R, Vajda S, Frank-Kamenetskii M, Kozakov D. 89 Computational mapping reveals effect of Hoogsteen breathing on duplex DNA reactivity with formaldehyde Journal of Biomolecular Structure and Dynamics. 31: 57-57. DOI: 10.1080/07391102.2013.786523  0.676
2012 Bohnuud T, Beglov D, Ngan CH, Zerbe B, Hall DR, Brenke R, Vajda S, Frank-Kamenetskii MD, Kozakov D. Computational mapping reveals dramatic effect of Hoogsteen breathing on duplex DNA reactivity with formaldehyde. Nucleic Acids Research. 40: 7644-52. PMID 22705795 DOI: 10.1093/Nar/Gks519  0.674
2012 Ngan CH, Bohnuud T, Mottarella SE, Beglov D, Villar EA, Hall DR, Kozakov D, Vajda S. FTMAP: extended protein mapping with user-selected probe molecules. Nucleic Acids Research. 40: W271-5. PMID 22589414 DOI: 10.1093/Nar/Gks441  0.762
2012 Hall DR, Ngan CH, Zerbe BS, Kozakov D, Vajda S. Hot spot analysis for driving the development of hits into leads in fragment-based drug discovery. Journal of Chemical Information and Modeling. 52: 199-209. PMID 22145575 DOI: 10.1021/Ci200468P  0.735
2012 Ngan CH, Hall DR, Zerbe B, Grove LE, Kozakov D, Vajda S. FTSite: high accuracy detection of ligand binding sites on unbound protein structures. Bioinformatics (Oxford, England). 28: 286-7. PMID 22113084 DOI: 10.1093/Bioinformatics/Btr651  0.73
2011 Hall DH, Grove LE, Yueh C, Ngan CH, Kozakov D, Vajda S. Robust identification of binding hot spots using continuum electrostatics: application to hen egg-white lysozyme. Journal of the American Chemical Society. 133: 20668-71. PMID 22092261 DOI: 10.1021/Ja207914Y  0.757
2010 Chuang GY, Mehra-Chaudhary R, Ngan CH, Zerbe BS, Kozakov D, Vajda S, Beamer LJ. Domain motion and interdomain hot spots in a multidomain enzyme. Protein Science : a Publication of the Protein Society. 19: 1662-72. PMID 20589904 DOI: 10.1002/Pro.446  0.726
2009 Ngan CH, Beglov D, Rudnitskaya AN, Kozakov D, Waxman DJ, Vajda S. The structural basis of pregnane X receptor binding promiscuity. Biochemistry. 48: 11572-81. PMID 19856963 DOI: 10.1021/Bi901578N  0.745
2008 Landon MR, Amaro RE, Baron R, Ngan CH, Ozonoff D, McCammon JA, Vajda S. Novel druggable hot spots in avian influenza neuraminidase H5N1 revealed by computational solvent mapping of a reduced and representative receptor ensemble. Chemical Biology & Drug Design. 71: 106-16. PMID 18205727 DOI: 10.1111/J.1747-0285.2007.00614.X  0.597
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