| Year |
Citation |
Score |
| 2021 |
Macioszek A, Wilczynski B. HERON: A Novel Tool Enables Identification of Long, Weakly Enriched Genomic Domains in ChIP-seq Data. International Journal of Molecular Sciences. 22. PMID 34360892 DOI: 10.3390/ijms22158123 |
0.321 |
|
| 2019 |
Réda C, Wilczyński B. Automated inference of gene regulatory networks using explicit regulatory modules. Journal of Theoretical Biology. 486: 110091. PMID 31790679 DOI: 10.1016/J.Jtbi.2019.110091 |
0.379 |
|
| 2019 |
Zaborowski R, Wilczyński B. BPscore: An Effective Metric for Meaningful Comparisons of Structural Chromosome Segmentations. Journal of Computational Biology : a Journal of Computational Molecular Cell Biology. PMID 30810370 DOI: 10.1089/Cmb.2018.0162 |
0.314 |
|
| 2018 |
Frolova A, Wilczyński B. Distributed Bayesian networks reconstruction on the whole genome scale. Peerj. 6: e5692. PMID 30364537 DOI: 10.7717/Peerj.5692 |
0.34 |
|
| 2017 |
Niskanen H, Tuszynska I, Zaborowski R, Heinäniemi M, Ylä-Herttuala S, Wilczynski B, Kaikkonen MU. Endothelial cell differentiation is encompassed by changes in long range interactions between inactive chromatin regions. Nucleic Acids Research. PMID 29216379 DOI: 10.1093/Nar/Gkx1214 |
0.309 |
|
| 2017 |
Herman-Izycka J, Wlasnowolski M, Wilczynski B. Taking promoters out of enhancers in sequence based predictions of tissue-specific mammalian enhancers. Bmc Medical Genomics. 10: 34. PMID 28589862 DOI: 10.1186/S12920-017-0264-3 |
0.358 |
|
| 2016 |
Archacki R, Yatusevich R, Buszewicz D, Krzyczmonik K, Patryn J, Iwanicka-Nowicka R, Biecek P, Wilczynski B, Koblowska M, Jerzmanowski A, Swiezewski S. Arabidopsis SWI/SNF chromatin remodeling complex binds both promoters and terminators to regulate gene expression. Nucleic Acids Research. PMID 27994035 DOI: 10.1093/Nar/Gkw1273 |
0.342 |
|
| 2016 |
Wilczynski B, Tiuryn J. FastBill: An Improved Tool for Prediction of Cis-Regulatory Modules. Journal of Computational Biology : a Journal of Computational Molecular Cell Biology. PMID 27710048 DOI: 10.1089/Cmb.2016.0108 |
0.335 |
|
| 2015 |
Buza K, Wilczynski B, Dojer N. RECORD: Reference-Assisted Genome Assembly for Closely Related Genomes. International Journal of Genomics. 2015: 563482. PMID 26558255 DOI: 10.1155/2015/563482 |
0.35 |
|
| 2015 |
Dabrowski M, Dojer N, Krystkowiak I, Kaminska B, Wilczynski B. Optimally choosing PWM motif databases and sequence scanning approaches based on ChIP-seq data. Bmc Bioinformatics. 16: 140. PMID 25927199 DOI: 10.1186/S12859-015-0573-5 |
0.383 |
|
| 2015 |
Mondal S, Wei Y, Arnosti D, Wilczynski B. Computational analysis of sequence motifs for discriminating different ChIP-exo profiles of related RBF proteins F1000research. 6. DOI: 10.7490/F1000Research.1097983.1 |
0.485 |
|
| 2013 |
Dojer N, Bednarz P, Podsiadlo A, Wilczynski B. BNFinder2: Faster Bayesian network learning and Bayesian classification. Bioinformatics (Oxford, England). 29: 2068-70. PMID 23818512 DOI: 10.1093/Bioinformatics/Btt323 |
0.311 |
|
| 2012 |
Wilczynski B, Liu YH, Yeo ZX, Furlong EE. Predicting spatial and temporal gene expression using an integrative model of transcription factor occupancy and chromatin state. Plos Computational Biology. 8: e1002798. PMID 23236268 DOI: 10.1371/Journal.Pcbi.1002798 |
0.368 |
|
| 2010 |
Wilczynski B, Furlong EE. Challenges for modeling global gene regulatory networks during development: insights from Drosophila. Developmental Biology. 340: 161-9. PMID 19874814 DOI: 10.1016/J.Ydbio.2009.10.032 |
0.369 |
|
| 2010 |
Wilczyński B, Hvidsten TR. A Computer Scientist's Guide to the Regulatory Genome Fundamenta Informaticae. 103: 323-332. DOI: 10.3233/Fi-2010-331 |
0.371 |
|
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