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Pietro Liò - Publications

Affiliations: 
Computer Laboratory University of Cambridge, Cambridge, England, United Kingdom 
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17 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Jamasb AR, Day B, Cangea C, Liò P, Blundell TL. Deep Learning for Protein-Protein Interaction Site Prediction. Methods in Molecular Biology (Clifton, N.J.). 2361: 263-288. PMID 34236667 DOI: 10.1007/978-1-0716-1641-3_16  0.673
2020 Bica I, Andrés-Terré H, Cvejic A, Liò P. Unsupervised generative and graph representation learning for modelling cell differentiation. Scientific Reports. 10: 9790. PMID 32555334 DOI: 10.1038/s41598-020-66166-8  0.301
2013 Castiglione F, Tieri P, De Graaf A, Franceschi C, Liò P, Van Ommen B, Mazzà C, Tuchel A, Bernaschi M, Samson C, Colombo T, Castellani GC, Capri M, Garagnani P, Salvioli S, et al. The onset of type 2 diabetes: proposal for a multi-scale model. Jmir Research Protocols. 2: e44. PMID 24176906 DOI: 10.2196/Resprot.2854  0.48
2011 Van Der Wath RC, Van Der Wath EC, Lió P. Parallel hematopoietic stem cell division rate estimation using an agent-based model on the grid Proceedings - 19th International Euromicro Conference On Parallel, Distributed, and Network-Based Processing, Pdp 2011. 311-317. DOI: 10.1109/PDP.2011.65  0.725
2009 van der Wath RC, Wilson A, Laurenti E, Trumpp A, Liò P. Estimating dormant and active hematopoietic stem cell kinetics through extensive modeling of bromodeoxyuridine label-retaining cell dynamics. Plos One. 4: e6972. PMID 19771180 DOI: 10.1371/journal.pone.0006972  0.733
2008 Wilson A, Laurenti E, Oser G, van der Wath RC, Blanco-Bose W, Jaworski M, Offner S, Dunant CF, Eshkind L, Bockamp E, Lió P, Macdonald HR, Trumpp A. Hematopoietic stem cells reversibly switch from dormancy to self-renewal during homeostasis and repair. Cell. 135: 1118-29. PMID 19062086 DOI: 10.1016/J.Cell.2008.10.048  0.715
2008 Van Der Wath RC, Liò P. A stochastic multi-agent model of stem cell proliferation Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 5191: 500-505. DOI: 10.1007/978-3-540-79992-4_65  0.721
2007 van der Wath E, Moutsianas L, van der Wath R, Visagie A, Milanesi L, Liò P. Grid methodology for identifying co-regulated genes and transcription factor binding sites. Ieee Transactions On Nanobioscience. 6: 162-7. PMID 17695752 DOI: 10.1109/TNB.2007.897470  0.686
2004 Liò P, Goldman N. Phylogenomics and bioinformatics of SARS-CoV. Trends in Microbiology. 12: 106-11. PMID 15058277 DOI: 10.1016/J.Tim.2004.01.005  0.448
2002 Liò P, Goldman N. Modeling mitochondrial protein evolution using structural information. Journal of Molecular Evolution. 54: 519-29. PMID 11956690 DOI: 10.1007/S00239001-0052-7  0.472
2001 Whelan S, Liò P, Goldman N. Molecular phylogenetics: state-of-the-art methods for looking into the past. Trends in Genetics : Tig. 17: 262-72. PMID 11335036 DOI: 10.1016/S0168-9525(01)02272-7  0.444
2000 Hagelberg E, Goldman N, Lio P, Whelan S, Schiefenhovel W, Clegg JB, Bowden DK. Evidence for mitochondrial DNA recombination in a human population of island Melanesia: Correction Proceedings of the Royal Society B: Biological Sciences. 267: 1595-1596. DOI: 10.1098/Rspb.2000.1183  0.434
1999 Liò P, Goldman N. Using protein structural information in evolutionary inference: transmembrane proteins. Molecular Biology and Evolution. 16: 1696-710. PMID 10605112 DOI: 10.1093/Oxfordjournals.Molbev.A026083  0.473
1999 Hagelberg E, Goldman N, Lió P, Whelan S, Schiefenhövel W, Clegg JB, Bowden DK. Evidence for mitochondrial DNA recombination in a human population of island Melanesia. Proceedings. Biological Sciences / the Royal Society. 266: 485-92. PMID 10189712 DOI: 10.1098/Rspb.1999.0663  0.436
1998 Liò P, Goldman N. Models of molecular evolution and phylogeny. Genome Research. 8: 1233-44. PMID 9872979 DOI: 10.1101/Gr.8.12.1233  0.491
1998 Liò P, Goldman N, Thorne JL, Jones3 DT. PASSML: combining evolutionary inference and protein secondary structure prediction. Bioinformatics (Oxford, England). 14: 726-33. PMID 9789098 DOI: 10.1093/Bioinformatics/14.8.726  0.471
1998 Liò P, Goldman N. Review: Models of molecular evolution and phylogeny Genome Research. 8: 1233-1244. DOI: 10.1101/gr.8.12.1233  0.445
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