Jason H. Moore - Publications

Affiliations: 
Program in Human Genetics, Bronxville, NY, United States 

392 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Hall MA, Wallace J, Lucas AM, Bradford Y, Verma SS, Müller-Myhsok B, Passero K, Zhou J, McGuigan J, Jiang B, Pendergrass SA, Zhang Y, Peissig P, Brilliant M, Sleiman P, ... ... Moore JH, et al. Novel EDGE encoding method enhances ability to identify genetic interactions. Plos Genetics. 17: e1009534. PMID 34086673 DOI: 10.1371/journal.pgen.1009534  0.8
2021 Graff M, Justice AE, Young KL, Marouli E, Zhang X, Fine RS, Lim E, Buchanan V, Rand K, Feitosa MF, Wojczynski MK, Yanek LR, Shao Y, Rohde R, Adeyemo AA, ... ... Moore JH, et al. Discovery and fine-mapping of height loci via high-density imputation of GWASs in individuals of African ancestry. American Journal of Human Genetics. PMID 33713608 DOI: 10.1016/j.ajhg.2021.02.011  0.76
2021 Kim D, Kim JH, Moore JH. Translational Bioinformatics: Integrating Electronic Health Record and Omics Data. Pacific Symposium On Biocomputing. Pacific Symposium On Biocomputing. 26: 356-359. PMID 33691034  0.56
2021 Cole BS, Gudiseva HV, Pistilli M, Salowe R, McHugh CP, Zody MC, Chavali VRM, Ying GS, Moore JH, O'Brien JM. The Role of Genetic Ancestry as a Risk Factor for Primary Open-angle Glaucoma in African Americans. Investigative Ophthalmology & Visual Science. 62: 28. PMID 33605984 DOI: 10.1167/iovs.62.2.28  0.64
2021 Kohane IS, Aronow BJ, Avillach P, Beaulieu-Jones BK, Bellazzi R, Bradford RL, Brat GA, Cannataro M, Cimino JJ, García-Barrio N, Gehlenborg N, Ghassemi M, Gutiérrez-Sacristán A, Hanauer DA, Holmes JH, ... ... Moore JH, et al. What Every Reader Should Know About Studies Using Electronic Health Record Data but May be Afraid to Ask. Journal of Medical Internet Research. PMID 33600347 DOI: 10.2196/22219  0.72
2021 Sipper M, Moore JH. Conservation machine learning: a case study of random forests. Scientific Reports. 11: 3629. PMID 33574563 DOI: 10.1038/s41598-021-83247-4  0.52
2021 Klann JG, Weber GM, Estiri H, Moal B, Avillach P, Hong C, Castro V, Maulhardt T, Tan ALM, Geva A, Beaulieu-Jones BK, Malovini A, South AM, Visweswaran S, Omenn GS, ... ... Moore JH, et al. Validation of an Internationally Derived Patient Severity Phenotype to Support COVID-19 Analytics from Electronic Health Record Data. Journal of the American Medical Informatics Association : Jamia. PMID 33566082 DOI: 10.1093/jamia/ocab018  0.72
2021 Weber GM, Hong C, Palmer NP, Avillach P, Murphy SN, Gutiérrez-Sacristán A, Xia Z, Serret-Larmande A, Neuraz A, Omenn GS, Visweswaran S, Klann JG, South AM, Loh NHW, Cannataro M, ... ... Moore JH, et al. International Comparisons of Harmonized Laboratory Value Trajectories to Predict Severe COVID-19: Leveraging the 4CE Collaborative Across 342 Hospitals and 6 Countries: A Retrospective Cohort Study. Medrxiv : the Preprint Server For Health Sciences. PMID 33564777 DOI: 10.1101/2020.12.16.20247684  0.72
2021 Li R, Duan R, Zhang X, Lumley T, Pendergrass S, Bauer C, Hakonarson H, Carrell DS, Smoller JW, Wei WQ, Carroll R, Velez Edwards DR, Wiesner G, Sleiman P, Denny JC, ... ... Moore JH, et al. Lossless integration of multiple electronic health records for identifying pleiotropy using summary statistics. Nature Communications. 12: 168. PMID 33420026 DOI: 10.1038/s41467-020-20211-2  0.88
2020 Sipper M, Moore JH. Gamorithm. Ieee Transactions On Games. 12: 115-118. PMID 33748653 DOI: 10.1109/tg.2018.2867743  0.52
2020 Brat GA, Weber GM, Gehlenborg N, Avillach P, Palmer NP, Chiovato L, Cimino J, Waitman LR, Omenn GS, Malovini A, Moore JH, Beaulieu-Jones BK, Tibollo V, Murphy SN, Yi SL, et al. International electronic health record-derived COVID-19 clinical course profiles: the 4CE consortium. Npj Digital Medicine. 3: 109. PMID 33597635 DOI: 10.1038/s41746-020-00308-0  0.72
2020 La Cava W, Moore JH. Learning feature spaces for regression with genetic programming. Genetic Programming and Evolvable Machines. 21: 433-467. PMID 33343224 DOI: 10.1007/S10710-020-09383-4  0.36
2020 Stubblefield J, Hervert M, Causey JL, Qualls JA, Dong W, Cai L, Fowler J, Bellis E, Walker K, Moore JH, Nehring S, Huang X. Transfer learning with chest X-rays for ER patient classification. Scientific Reports. 10: 20900. PMID 33262425 DOI: 10.1038/s41598-020-78060-4  0.6
2020 Madhavan S, Bastarache L, Brown JS, Butte AJ, Dorr DA, Embi PJ, Friedman CP, Johnson KB, Moore JH, Kohane IS, Payne PRO, Tenenbaum JD, Weiner MG, Wilcox AB, Ohno-Machado L. Use of electronic health records to support a public health response to the COVID-19 pandemic in the United States: a perspective from 15 academic medical centers. Journal of the American Medical Informatics Association : Jamia. PMID 33260207 DOI: 10.1093/jamia/ocaa287  0.56
2020 Romano JD, Moore JH. Ten simple rules for writing a paper about scientific software. Plos Computational Biology. 16: e1008390. PMID 33180774 DOI: 10.1371/journal.pcbi.1008390  0.84
2020 Manduchi E, Fu W, Romano JD, Ruberto S, Moore JH. Embedding covariate adjustments in tree-based automated machine learning for biomedical big data analyses. Bmc Bioinformatics. 21: 430. PMID 32998684 DOI: 10.1186/s12859-020-03755-4  0.48
2020 Causey J, Li K, Chen X, Dong W, Walker K, Qualls J, Stubblefield J, Moore JH, Guan Y, Huang X. Spatial Pyramid Pooling with 3D Convolution Improves Lung Cancer Detection. Ieee/Acm Transactions On Computational Biology and Bioinformatics. PMID 32991288 DOI: 10.1109/TCBB.2020.3027744  0.6
2020 Brat GA, Weber GM, Gehlenborg N, Avillach P, Palmer NP, Chiovato L, Cimino J, Waitman LR, Omenn GS, Malovini A, Moore JH, Beaulieu-Jones BK, Tibollo V, Murphy SN, Yi SL, et al. International electronic health record-derived COVID-19 clinical course profiles: the 4CE consortium. Npj Digital Medicine. 3: 109. PMID 32864472 DOI: 10.1038/s41746-020-00308-0  0.72
2020 Sipper M, Moore JH. Conservation machine learning. Biodata Mining. 13: 9. PMID 32774460 DOI: 10.1186/S13040-020-00220-Z  0.52
2020 La Cava W, Williams H, Fu W, Vitale S, Srivatsan D, Moore JH. Evaluating recommender systems for AI-driven biomedical informatics. Bioinformatics (Oxford, England). PMID 32766825 DOI: 10.1093/bioinformatics/btaa698  0.36
2020 Le TT, Moore JH. treeheatr: an R package for interpretable decision tree visualizations. Bioinformatics (Oxford, England). PMID 32702108 DOI: 10.1093/bioinformatics/btaa662  0.56
2020 Pei J, Harakalova M, Treibel TA, Lumbers RT, Boukens BJ, Efimov IR, van Dinter JT, González A, López B, El Azzouzi H, van den Dungen N, van Dijk CGM, Krebber MM, den Ruijter HM, Pasterkamp G, ... ... Moore JH, et al. H3K27ac acetylome signatures reveal the epigenomic reorganization in remodeled non-failing human hearts. Clinical Epigenetics. 12: 106. PMID 32664951 DOI: 10.1186/S13148-020-00895-5  0.64
2020 Duan R, Luo C, Schuemie MJ, Tong J, Liang CJ, Chang HH, Boland MR, Bian J, Xu H, Holmes JH, Forrest CB, Morton SC, Berlin JA, Moore JH, Mahoney KB, et al. Learning from local to global: An efficient distributed algorithm for modeling time-to-event data. Journal of the American Medical Informatics Association : Jamia. PMID 32626900 DOI: 10.1093/Jamia/Ocaa044  0.88
2020 Brito JJ, Li J, Moore JH, Greene CS, Nogoy NA, Garmire LX, Mangul S. Recommendations to enhance rigor and reproducibility in biomedical research. Gigascience. 9. PMID 32479592 DOI: 10.1093/Gigascience/Giaa056  1
2020 Moore JH, Barnett I, Boland MR, Chen Y, Demiris G, Gonzalez-Hernandez G, Herman DS, Himes BE, Hubbard RA, Kim D, Morris JS, Mowery DL, Ritchie MD, Shen L, Urbanowicz R, et al. Ideas for how informaticians can get involved with COVID-19 research. Biodata Mining. 13: 3. PMID 32419848 DOI: 10.1186/S13040-020-00213-Y  0.88
2020 Wang L, Schnall J, Small A, Hubbard RA, Moore JH, Damrauer SM, Chen J. Case contamination in electronic health records-based case-control studies. Biometrics. PMID 32246839 DOI: 10.1111/Biom.13264  0.6
2020 Li R, Chen Y, Ritchie MD, Moore JH. Electronic health records and polygenic risk scores for predicting disease risk. Nature Reviews. Genetics. PMID 32235907 DOI: 10.1038/S41576-020-0224-1  0.88
2020 Chirinos JA, Orlenko A, Zhao L, Basso MD, Cvijic ME, Li Z, Spires TE, Yarde M, Wang Z, Seiffert DA, Prenner S, Zamani P, Bhattacharya P, Kumar A, Margulies KB, ... ... Moore JH, et al. Multiple Plasma Biomarkers for Risk Stratification in Patients With Heart Failure and Preserved Ejection Fraction. Journal of the American College of Cardiology. 75: 1281-1295. PMID 32192654 DOI: 10.1016/J.Jacc.2019.12.069  0.72
2020 Moore JH, Olson RS, Schmitt P, Chen Y, Manduchi E. How Computational Experiments Can Improve Our Understanding of the Genetic Architecture of Common Human Diseases. Artificial Life. 1-15. PMID 32027528 DOI: 10.1162/Artl_A_00308  0.88
2020 Ritchie MD, Moore JH, Kim JH. Translational Bioinformatics: Biobanks in the Precision Medicine Era. Pacific Symposium On Biocomputing. Pacific Symposium On Biocomputing. 25: 743-747. PMID 31797645  0.8
2020 Tong J, Duan R, Li R, Scheuemie MJ, Moore JH, Chen Y. Robust-ODAL: Learning from heterogeneous health systems without sharing patient-level data. Pacific Symposium On Biocomputing. Pacific Symposium On Biocomputing. 25: 695-706. PMID 31797639  0.88
2020 Sipper M, Moore JH. Genetic programming theory and practice: a fifteen-year trajectory Genetic Programming and Evolvable Machines. 21: 169-179. DOI: 10.1007/S10710-019-09353-5  0.52
2019 Moore JH, Raghavachari N. Artificial Intelligence Based Approaches to Identify Molecular Determinants of Exceptional Health and Life Span-An Interdisciplinary Workshop at the National Institute on Aging. Frontiers in Artificial Intelligence. 2: 12. PMID 33733101 DOI: 10.3389/frai.2019.00012  0.32
2019 Cava W, Bauer C, Moore JH, Pendergrass SA. Interpretation of machine learning predictions for patient outcomes in electronic health records. Amia ... Annual Symposium Proceedings. Amia Symposium. 2019: 572-581. PMID 32308851  0.68
2019 Sipper M, Moore JH. OMNIREP: Originating Meaning by Coevolving Encodings and Representations. Memetic Computing. 11: 251-261. PMID 31885724 DOI: 10.1007/S12293-019-00285-2  0.52
2019 Yao X, Cong S, Yan J, Risacher SL, Saykin AJ, Moore JH, Shen L. Regional Imaging Genetic Enrichment Analysis. Bioinformatics (Oxford, England). PMID 31860065 DOI: 10.1093/Bioinformatics/Btz948  0.72
2019 Sipper M, Fu W, Ahuja K, Moore JH. Correction to: Investigating the parameter space of evolutionary algorithms. Biodata Mining. 12: 22. PMID 31827622 DOI: 10.1186/S13040-019-0210-3  0.52
2019 Duan R, Boland MR, Liu Z, Liu Y, Chang HH, Xu H, Chu H, Schmid CH, Forrest CB, Holmes JH, Schuemie MJ, Berlin JA, Moore JH, Chen Y. Learning from electronic health records across multiple sites: A communication-efficient and privacy-preserving distributed algorithm. Journal of the American Medical Informatics Association : Jamia. PMID 31816040 DOI: 10.1093/Jamia/Ocz199  0.88
2019 Yao X, Cong S, Yan J, Risacher SL, Saykin AJ, Moore JH, Shen L. Mining Regional Imaging Genetic Associations via Voxel-wise Enrichment Analysis. ... Ieee-Embs International Conference On Biomedical and Health Informatics. Ieee-Embs International Conference On Biomedical and Health Informatics. 2019. PMID 31742256 DOI: 10.1109/BHI.2019.8834450  0.72
2019 Penrod NM, Lynch S, Thomas S, Seshadri N, Moore JH. Prevalence and Characterization of Yoga Mentions in the Electronic Health Record. Journal of the American Board of Family Medicine : Jabfm. 32: 790-800. PMID 31704747 DOI: 10.3122/Jabfm.2019.06.190115  1
2019 Tong J, Huang J, Chubak J, Wang X, Moore JH, Hubbard RA, Chen Y. An augmented estimation procedure for EHR-based association studies accounting for differential misclassification. Journal of the American Medical Informatics Association : Jamia. PMID 31617899 DOI: 10.1093/Jamia/Ocz180  0.88
2019 Liu Y, Huang J, Urbanowicz RJ, Chen K, Manduchi E, Greene CS, Moore JH, Scheet P, Chen Y. Embracing study heterogeneity for finding genetic interactions in large-scale research consortia. Genetic Epidemiology. PMID 31583758 DOI: 10.1002/Gepi.22262  1
2019 Li R, Duan R, Kember RL, Rader DJ, Damrauer SM, Moore JH, Chen Y. A regression framework to uncover pleiotropy in large-scale electronic health record data. Journal of the American Medical Informatics Association : Jamia. 26: 1083-1090. PMID 31529123 DOI: 10.1093/Jamia/Ocz084  0.88
2019 Duan R, Cao M, Ning Y, Zhu M, Zhang B, McDermott A, Chu H, Zhou X, Moore JH, Ibrahim JG, Scharfstein DO, Chen Y. Global identifiability of latent class models with applications to diagnostic test accuracy studies: a Gröbner basis approach. Biometrics. PMID 31444807 DOI: 10.1111/Biom.13133  0.88
2019 Lo Y, Lynch SF, Urbanowicz RJ, Olson RS, Ritter AZ, Whitehouse CR, O'Connor M, Keim SK, McDonald M, Moore JH, Bowles KH. Using Machine Learning on Home Health Care Assessments to Predict Fall Risk. Studies in Health Technology and Informatics. 264: 684-688. PMID 31438011 DOI: 10.3233/Shti190310  1
2019 Huang J, Zhang X, Tong J, Du J, Duan R, Yang L, Moore JH, Tao C, Chen Y. Comparing drug safety of hepatitis C therapies using post-market data. Bmc Medical Informatics and Decision Making. 19: 147. PMID 31391106 DOI: 10.1186/S12911-019-0860-6  0.88
2019 Li R, Chen Y, Moore JH. Integration of genetic and clinical information to improve imputation of data missing from electronic health records. Journal of the American Medical Informatics Association : Jamia. PMID 31329892 DOI: 10.1093/Jamia/Ocz041  0.88
2019 Manduchi E, Orzechowski PR, Ritchie MD, Moore JH. Exploration of a diversity of computational and statistical measures of association for genome-wide genetic studies. Biodata Mining. 12: 14. PMID 31320928 DOI: 10.1186/S13040-019-0201-4  0.8
2019 Orzechowski P, Boryczko K, Moore JH. Scalable biclustering - the future of big data exploration? Gigascience. 8. PMID 31251324 DOI: 10.1093/Gigascience/Giz078  0.6
2019 Fernández-Santiago R, Martín-Flores N, Antonelli F, Cerquera C, Moreno V, Bandres-Ciga S, Manduchi E, Tolosa E, Singleton AB, Moore JH, Martí MJ, Ezquerra M, Malagelada C. Pathway single nucleotide polymorphisms interact to modulate the age at onset of Parkinson's disease. Movement Disorders : Official Journal of the Movement Disorder Society. PMID 31234232 DOI: 10.1002/Mds.27770  0.48
2019 Le TT, Fu W, Moore JH. Scaling tree-based automated machine learning to biomedical big data with a feature set selector. Bioinformatics (Oxford, England). PMID 31165141 DOI: 10.1093/Bioinformatics/Btz470  0.56
2019 Manduchi E, Hemerich D, van Setten J, Tragante V, Harakalova M, Pei J, Williams SM, van der Harst P, Asselbergs FW, Moore JH. A comparison of two workflows for regulome and transcriptome-based prioritization of genetic variants associated with myocardial mass. Genetic Epidemiology. PMID 31145509 DOI: 10.1002/Gepi.22215  0.76
2019 Penrod NM, Moore JH. Why mind-body medicine is poised to set a new standard for clinical research. Journal of Clinical Epidemiology. PMID 31112802 DOI: 10.1016/J.Jclinepi.2019.05.001  1
2019 Moore JH, Olson RS, Chen Y, Sipper M. Automated discovery of test statistics using genetic programming. Genetic Programming and Evolvable Machines. 20: 127-137. PMID 31105467 DOI: 10.1007/S10710-018-9338-Z  0.88
2019 Lussier YA, Butte AJ, Li H, Chen R, Moore JH. Translational informatics of population health: How large biomolecular and clinical datasets unite. Pacific Symposium On Biocomputing. Pacific Symposium On Biocomputing. 24: 455-459. PMID 30864347  0.72
2019 Berghout J, Lussier YA, Vitali F, Bulyk ML, Kann MG, Moore JH. Workshop during the Pacific Symposium of Biocomputing, Jan 3-7, 2019: Reading between the genes: interpreting non-coding DNA in high-throughput. Pacific Symposium On Biocomputing. Pacific Symposium On Biocomputing. 24: 444-448. PMID 30864345  0.56
2019 Duan R, Boland MR, Moore JH, Chen Y. ODAL: A one-shot distributed algorithm to perform logistic regressions on electronic health records data from multiple clinical sites. Pacific Symposium On Biocomputing. Pacific Symposium On Biocomputing. 24: 30-41. PMID 30864308  0.88
2019 Moore JH, Mackay TFC, Williams SM. Testing the assumptions of parametric linear models: the need for biological data mining in disciplines such as human genetics. Biodata Mining. 12: 6. PMID 30792817 DOI: 10.1186/S13040-019-0194-Z  0.76
2019 Moore JH, Boland MR, Camara PG, Chervitz H, Gonzalez G, Himes BE, Kim D, Mowery DL, Ritchie MD, Shen L, Urbanowicz RJ, Holmes JH. Preparing next-generation scientists for biomedical big data: artificial intelligence approaches. Personalized Medicine. PMID 30760118 DOI: 10.2217/Pme-2018-0145  1
2019 Hemerich D, Pei J, Harakalova M, van Setten J, Boymans S, Boukens BJ, Efimov IR, Michels M, van der Velden J, Vink A, Cheng C, van der Harst P, Moore JH, Mokry M, Tragante V, et al. Integrative Functional Annotation of 52 Genetic Loci Influencing Myocardial Mass Identifies Candidate Regulatory Variants and Target Genes. Circulation. Genomic and Precision Medicine. PMID 30681347 DOI: 10.1161/CIRCGEN.118.002328  0.64
2019 Orzechowski P, Moore JH. EBIC: an open source software for high-dimensional and big data analyses. Bioinformatics (Oxford, England). PMID 30649199 DOI: 10.1093/Bioinformatics/Btz027  0.6
2018 Tragante V, Hemerich D, Alshabeeb M, Brænne I, Lempiäinen H, Patel RS, den Ruijter HM, Barnes MR, Moore JH, Schunkert H, Erdmann J, Asselbergs FW. Druggability of Coronary Artery Disease Risk Loci. Circulation. Genomic and Precision Medicine. 11: e001977. PMID 30354342 DOI: 10.1161/CIRCGEN.117.001977  0.48
2018 Sipper M, Urbanowicz RJ, Moore JH. To know the objective is not (necessarily) to know the objective function. Biodata Mining. 11: 21. PMID 30323861 DOI: 10.1186/S13040-018-0182-8  1
2018 Piette ER, Moore JH. Identification of epistatic interactions between the human RNA demethylases FTO and ALKBH5 with gene set enrichment analysis informed by differential methylation. Bmc Proceedings. 12: 59. PMID 30275901 DOI: 10.1186/S12919-018-0122-0  1
2018 Le TT, Urbanowicz RJ, Moore JH, McKinney BA. Statistical Inference Relief (STIR) feature selection. Bioinformatics (Oxford, England). PMID 30239600 DOI: 10.1093/Bioinformatics/Bty788  1
2018 Urbanowicz RJ, Meeker M, Cava W, Olson RS, Moore JH. Relief-Based Feature Selection: Introduction and Review. Journal of Biomedical Informatics. PMID 30031057 DOI: 10.1016/J.Jbi.2018.07.014  1
2018 Urbanowicz RJ, Olson RS, Schmitt P, Meeker M, Moore JH. Benchmarking Relief-Based Feature Selection Methods for Bioinformatics Data Mining. Journal of Biomedical Informatics. PMID 30030120 DOI: 10.1016/J.Jbi.2018.07.015  1
2018 Orzechowski P, Panszczyk A, Huang X, Moore JH. runibic: a Bioconductor package for parallel row-based biclustering of gene expression data. Bioinformatics (Oxford, England). PMID 29939213 DOI: 10.1093/bioinformatics/bty512  0.6
2018 Manduchi E, Williams SM, Chesi A, Johnson ME, Wells AD, Grant SFA, Moore JH. Leveraging epigenomics and contactomics data to investigate SNP pairs in GWAS. Human Genetics. PMID 29797095 DOI: 10.1007/S00439-018-1893-0  0.76
2018 Chernikova DA, Madan JC, Housman ML, Zain-Ul-Abideen M, Lundgren SN, Morrison HG, Sogin ML, Williams SM, Moore JH, Karagas MR, Hoen AG. The premature infant gut microbiome during the first 6 weeks of life differs based on gestational maturity at birth. Pediatric Research. PMID 29795209 DOI: 10.1038/S41390-018-0022-Z  0.76
2018 Orzechowski P, Sipper M, Huang X, Moore JH. EBIC: an evolutionary-based parallel biclustering algorithm for pattern discovery. Bioinformatics (Oxford, England). PMID 29790909 DOI: 10.1093/Bioinformatics/Bty401  0.6
2018 Cava W, Helmuth T, Spector L, Moore JH. A probabilistic and multi-objective analysis of lexicase selection and ε-lexicase selection. Evolutionary Computation. 1-28. PMID 29746157 DOI: 10.1162/Evco_A_00224  0.48
2018 Causey JL, Ashby C, Walker K, Wang ZP, Yang M, Guan Y, Moore JH, Huang X. DNAp: A Pipeline for DNA-seq Data Analysis. Scientific Reports. 8: 6793. PMID 29717215 DOI: 10.1038/S41598-018-25022-6  0.6
2018 Piette ER, Moore JH. Improving machine learning reproducibility in genetic association studies with proportional instance cross validation (PICV). Biodata Mining. 11: 6. PMID 29713384 DOI: 10.1186/S13040-018-0167-7  1
2018 Verma SS, Lucas A, Zhang X, Veturi Y, Dudek S, Li B, Li R, Urbanowicz R, Moore JH, Kim D, Ritchie MD. Collective feature selection to identify crucial epistatic variants. Biodata Mining. 11: 5. PMID 29713383 DOI: 10.1186/S13040-018-0168-6  0.8
2018 Zigon B, Li H, Yao X, Fang S, Hasan MA, Yan J, Moore JH, Saykin AJ, Shen L. GPU Accelerated Browser for Neuroimaging Genomics. Neuroinformatics. PMID 29691798 DOI: 10.1007/S12021-018-9376-Y  0.72
2018 Cole BS, Moore JH. Eleven quick tips for architecting biomedical informatics workflows with cloud computing. Plos Computational Biology. 14: e1005994. PMID 29596416 DOI: 10.1371/Journal.Pcbi.1005994  0.64
2018 Beaulieu-Jones BK, Lavage DR, Snyder JW, Moore JH, Pendergrass SA, Bauer CR. Characterizing and Managing Missing Structured Data in Electronic Health Records: Data Analysis. Jmir Medical Informatics. 6: e11. PMID 29475824 DOI: 10.2196/Medinform.8960  0.72
2018 Sipper M, Fu W, Ahuja K, Moore JH. Investigating the parameter space of evolutionary algorithms. Biodata Mining. 11: 2. PMID 29467825 DOI: 10.1186/S13040-018-0164-X  0.52
2018 Vajravelu RK, Scott FI, Mamtani R, Li H, Moore JH, Lewis JD. Medication class enrichment analysis: a novel algorithm to analyze multiple pharmacologic exposures simultaneously using electronic health record data. Journal of the American Medical Informatics Association : Jamia. PMID 29378062 DOI: 10.1093/Jamia/Ocx162  0.72
2018 Manduchi E, Chesi A, Hall MA, Grant SFA, Moore JH. Leveraging putative enhancer-promoter interactions to investigate two-way epistasis in Type 2 Diabetes GWAS. Pacific Symposium On Biocomputing. Pacific Symposium On Biocomputing. 23: 548-558. PMID 29218913  0.8
2018 Lussier YA, Berghout J, Vitali F, Ramos KS, Kann M, Moore JH. Reading Between the Genes: Computational Models to Discover Function from Noncoding DNA. Pacific Symposium On Biocomputing. Pacific Symposium On Biocomputing. 23: 507-511. PMID 29218909  0.56
2018 Orlenko A, Moore JH, Orzechowski P, Olson RS, Cairns J, Caraballo PJ, Weinshilboum RM, Wang L, Breitenstein MK. Considerations for automated machine learning in clinical metabolic profiling: Altered homocysteine plasma concentration associated with metformin exposure. Pacific Symposium On Biocomputing. Pacific Symposium On Biocomputing. 23: 460-471. PMID 29218905  0.6
2018 Moore JH, Shestov M, Schmitt P, Olson RS. A heuristic method for simulating open-data of arbitrary complexity that can be used to compare and evaluate machine learning methods. Pacific Symposium On Biocomputing. Pacific Symposium On Biocomputing. 23: 259-267. PMID 29218887  0.48
2018 Olson RS, Cava W, Mustahsan Z, Varik A, Moore JH. Data-driven advice for applying machine learning to bioinformatics problems. Pacific Symposium On Biocomputing. Pacific Symposium On Biocomputing. 23: 192-203. PMID 29218881  0.48
2018 Beaulieu-Jones BK, Orzechowski P, Moore JH. Mapping Patient Trajectories using Longitudinal Extraction and Deep Learning in the MIMIC-III Critical Care Database. Pacific Symposium On Biocomputing. Pacific Symposium On Biocomputing. 23: 123-132. PMID 29218875  0.72
2018 McNaughton C, Lynch S, Newport KB, Wong R, Svetec S, Moore J, Holliday R, Oyer RA, Sivendran S. Patterns of anti-cancer therapy use in the last 14 days of life in a community cancer institute. Journal of Clinical Oncology. 36: 66-66. DOI: 10.1200/Jco.2018.36.34_Suppl.66  0.32
2018 Pei J, Harakalova M, Treibel T, Boukens B, Vink A, Moore J, Velden J, Mokry M, Cheng C, Asselbergs F. 210Genome-wide analysis reveals unique H3K27ac profile in acquired and inherited human myocardial remodelling Cardiovascular Research. 114. DOI: 10.1093/Cvr/Cvy060.154  0.64
2017 Huang J, Zhang X, Du J, Duan R, Yang L, Moore JH, Chen Y, Tao C. Comparing Different Adverse Effects Among Multiple Drugs Using FAERS Data. Studies in Health Technology and Informatics. 245: 1268. PMID 29295353  0.88
2017 Olson RS, La Cava W, Orzechowski P, Urbanowicz RJ, Moore JH. PMLB: a large benchmark suite for machine learning evaluation and comparison. Biodata Mining. 10: 36. PMID 29238404 DOI: 10.1186/S13040-017-0154-4  1
2017 Skarke C, Lahens NF, Rhoades SD, Campbell A, Bittinger K, Bailey A, Hoffmann C, Olson RS, Chen L, Yang G, Price TS, Moore JH, Bushman FD, Greene CS, Grant GR, et al. A Pilot Characterization of the Human Chronobiome. Scientific Reports. 7: 17141. PMID 29215023 DOI: 10.1038/S41598-017-17362-6  1
2017 Sipper M, Moore JH. Artificial intelligence: more human with human. Biodata Mining. 10: 34. PMID 29213332 DOI: 10.1186/S13040-017-0157-1  0.52
2017 Huang J, Duan R, Hubbard RA, Wu Y, Moore JH, Xu H, Chen Y. PIE: A prior knowledge guided integrated likelihood estimation method for bias reduction in association studies using electronic health records data. Journal of the American Medical Informatics Association : Jamia. PMID 29206922 DOI: 10.1093/Jamia/Ocx137  0.88
2017 Huang J, Liu Y, Vitale S, Penning TM, Whitehead AS, Blair IA, Vachani A, Clapper ML, Muscat JE, Lazarus P, Scheet P, Moore JH, Chen Y. On meta- and mega-analyses for gene-environment interactions. Genetic Epidemiology. PMID 29110346 DOI: 10.1002/Gepi.22085  0.88
2017 Hall MA, Wallace J, Lucas A, Kim D, Basile AO, Verma SS, McCarty CA, Brilliant MH, Peissig PL, Kitchner TE, Verma A, Pendergrass SA, Dudek SM, Moore JH, Ritchie MD. PLATO software provides analytic framework for investigating complexity beyond genome-wide association studies. Nature Communications. 8: 1167. PMID 29079728 DOI: 10.1038/S41467-017-00802-2  0.8
2017 Cole BS, Hall MA, Urbanowicz RJ, Gilbert-Diamond D, Moore JH. Analysis of Gene-Gene Interactions. Current Protocols in Human Genetics. 95: 1.14.1-1.14.10. PMID 29044470 DOI: 10.1002/Cphg.45  1
2017 Wang L, Damrauer SM, Zhang H, Zhang AX, Xiao R, Moore JH, Chen J. Phenotype validation in electronic health records based genetic association studies. Genetic Epidemiology. PMID 29023970 DOI: 10.1002/Gepi.22080  0.6
2017 Ritchie MD, Davis JR, Aschard H, Battle A, Conti D, Du M, Eskin E, Fallin MD, Hsu L, Kraft P, Moore JH, Pierce BL, Bien SA, Thomas DC, Wei P, et al. Incorporation of Biological Knowledge Into the Study of Gene-Environment Interactions. American Journal of Epidemiology. 186: 771-777. PMID 28978191 DOI: 10.1093/Aje/Kwx229  0.8
2017 Mechanic LE, Lindström S, Daily KM, Sieberts SK, Amos CI, Chen HS, Cox NJ, Dathe M, Feuer EJ, Guertin MJ, Hoffman J, Liu Y, Moore JH, Myers CL, Ritchie MD, et al. Up For A Challenge (U4C): Stimulating innovation in breast cancer genetic epidemiology. Plos Genetics. 13: e1006945. PMID 28957327 DOI: 10.1371/Journal.Pgen.1006945  0.8
2017 Graham BE, Darabos C, Huang M, Muglia LJ, Moore JH, Williams SM. Evolutionarily derived networks to inform disease pathways. Genetic Epidemiology. PMID 28944497 DOI: 10.1002/Gepi.22078  1
2017 Sipper M, Olson RS, Moore JH. Evolutionary computation: the next major transition of artificial intelligence? Biodata Mining. 10: 26. PMID 28775766 DOI: 10.1186/S13040-017-0147-3  0.52
2017 Holzinger ER, Verma SS, Moore CB, Hall M, De R, Gilbert-Diamond D, Lanktree MB, Pankratz N, Amuzu A, Burt A, Dale C, Dudek S, Furlong CE, Gaunt TR, Kim DS, ... ... Moore JH, et al. Discovery and replication of SNP-SNP interactions for quantitative lipid traits in over 60,000 individuals. Biodata Mining. 10: 25. PMID 28770004 DOI: 10.1186/S13040-017-0145-5  1
2017 Sobota RS, Stein CM, Kodaman N, Maro I, Wieland-Alter W, Igo RP, Magohe A, Malone LL, Chervenak K, Hall NB, Matee M, Mayanja-Kizza H, Joloba M, Moore JH, Scott WK, et al. A chromosome 5q31.1 locus associates with tuberculin skin test reactivity in HIV-positive individuals from tuberculosis hyper-endemic regions in east Africa. Plos Genetics. 13: e1006710. PMID 28628665 DOI: 10.1371/Journal.Pgen.1006710  0.76
2017 Yao X, Yan J, Liu K, Kim S, Nho K, Risacher SL, Greene CS, Moore JH, Saykin AJ, Shen L. Tissue-specific network-based genome wide study of amygdala imaging phenotypes to identify functional interaction modules. Bioinformatics (Oxford, England). PMID 28575147 DOI: 10.1093/Bioinformatics/Btx344  1
2017 Moore JH, Andrews PC, Olson RS, Carlson SE, Larock CR, Bulhoes MJ, O'Connor JP, Greytak EM, Armentrout SL. Grid-based stochastic search for hierarchical gene-gene interactions in population-based genetic studies of common human diseases. Biodata Mining. 10: 19. PMID 28572842 DOI: 10.1186/S13040-017-0139-3  0.48
2017 Tragante V, Gho JMIH, Felix JF, Vasan RS, Smith NL, Voight BF, Palmer C, van der Harst P, Moore JH, Asselbergs FW. Gene Set Enrichment Analyses: lessons learned from the heart failure phenotype. Biodata Mining. 10: 18. PMID 28559929 DOI: 10.1186/S13040-017-0137-5  0.48
2017 Kodaman N, Sobota RS, Asselbergs FW, Oetjens MT, Moore JH, Brown NJ, Aldrich MC, Williams SM. Genetic Effects on the Correlation Structure of CVD Risk Factors: Exome-Wide Data From a Ghanaian Population. Global Heart. PMID 28408189 DOI: 10.1016/J.Gheart.2017.01.013  0.76
2016 Cheng S, Andrew AS, Andrews PC, Moore JH. Complex systems analysis of bladder cancer susceptibility reveals a role for decarboxylase activity in two genome-wide association studies. Biodata Mining. 9: 40. PMID 27999618 DOI: 10.1186/S13040-016-0119-Z  0.48
2016 Moore JH, Jennings SF, Greene CS, Hunter LE, Perkins AD, Williams-Devane C, Wunsch DC, Zhao Z, Huang X. NO-BOUNDARY THINKING IN BIOINFORMATICS. Pacific Symposium On Biocomputing. Pacific Symposium On Biocomputing. 22: 646-648. PMID 27897015  1
2016 Garmire LX, Gliske S, Nguyen QC, Chen JH, Nemati S, VAN Horn JD, Moore JH, Shreffler C, Dunn M. THE TRAINING OF NEXT GENERATION DATA SCIENTISTS IN BIOMEDICINE. Pacific Symposium On Biocomputing. Pacific Symposium On Biocomputing. 22: 640-645. PMID 27897014  0.6
2016 Beaulieu-Jones BK, Moore JH. MISSING DATA IMPUTATION IN THE ELECTRONIC HEALTH RECORD USING DEEPLY LEARNED AUTOENCODERS. Pacific Symposium On Biocomputing. Pacific Symposium On Biocomputing. 22: 207-218. PMID 27896976  0.72
2016 De R, Verma SS, Holzinger E, Hall M, Burt A, Carrell DS, Crosslin DR, Jarvik GP, Kuivaniemi H, Kullo IJ, Lange LA, Lanktree MB, Larson EB, North KE, Reiner AP, ... ... Moore JH, et al. Identifying gene-gene interactions that are highly associated with four quantitative lipid traits across multiple cohorts. Human Genetics. PMID 27848076 DOI: 10.1007/S00439-016-1738-7  1
2016 Yao X, Yan J, Kim S, Nho K, Risacher SL, Inlow M, Moore JH, Saykin AJ, Shen L. Two-dimensional enrichment analysis for mining high-level imaging genetic associations. Brain Informatics. PMID 27747820 DOI: 10.1007/S40708-016-0052-4  0.72
2016 Kodaman N, Aldrich MC, Sobota R, Asselbergs FW, Poku KA, Brown NJ, Moore JH, Williams SM. Cardiovascular Disease Risk Factors in Ghana during the Rural-to-Urban Transition: A Cross-Sectional Study. Plos One. 11: e0162753. PMID 27732601 DOI: 10.1371/Journal.Pone.0162753  0.76
2016 Kodaman N, Aldrich MC, Sobota R, Asselbergs FW, Brown NJ, Moore JH, Williams SM. Plasminogen Activator Inhibitor-1 and Diagnosis of the Metabolic Syndrome in a West African Population. Journal of the American Heart Association. 5. PMID 27697752 DOI: 10.1161/Jaha.116.003867  0.76
2016 Denaxas SC, Asselbergs FW, Moore JH. The tip of the iceberg: challenges of accessing hospital electronic health record data for biological data mining. Biodata Mining. 9: 29. PMID 27688810 DOI: 10.1186/S13040-016-0109-1  0.48
2016 Du L, Huang H, Yan J, Kim S, Risacher S, Inlow M, Moore J, Saykin A, Shen L. Structured sparse CCA for brain imaging genetics via graph OSCAR. Bmc Systems Biology. 10: 68. PMID 27585988 DOI: 10.1186/S12918-016-0312-1  1
2016 Frost HR, Shen L, Saykin AJ, Williams SM, Moore JH. Identifying significant gene-environment interactions using a combination of screening testing and hierarchical false discovery rate control. Genetic Epidemiology. PMID 27578615 DOI: 10.1002/Gepi.21997  1
2016 Li H, Achour I, Bastarache L, Berghout J, Gardeux V, Li J, Lee Y, Pesce L, Yang X, Ramos KS, Foster I, Denny JC, Moore JH, Lussier YA. Integrative genomics analyses unveil downstream biological effectors of disease-specific polymorphisms buried in intergenic regions. Npj Genomic Medicine. 1. PMID 27482468 DOI: 10.1038/Npjgenmed.2016.6  0.72
2016 Wei R, De Vivo I, Huang S, Zhu X, Risch H, Moore JH, Yu H, Garmire LX. Meta-dimensional data integration identifies critical pathways for susceptibility, tumorigenesis and progression of endometrial cancer. Oncotarget. PMID 27409342 DOI: 10.18632/Oncotarget.10509  0.6
2016 Hall MA, Moore JH, Ritchie MD. Embracing Complex Associations in Common Traits: Critical Considerations for Precision Medicine. Trends in Genetics : Tig. PMID 27392675 DOI: 10.1016/J.Tig.2016.06.001  0.8
2016 Frost HR, Amos CI, Moore JH. A global test for gene-gene interactions based on random matrix theory. Genetic Epidemiology. PMID 27386793 DOI: 10.1002/Gepi.21990  0.8
2016 Moore JH, Holmes JH. The golden era of biomedical informatics has begun. Biodata Mining. 9: 15. PMID 27069509 DOI: 10.1186/S13040-016-0092-6  1
2016 Qiu J, Moore JH, Darabos C. Studying the Genetics of Complex Disease With Ancestry-Specific Human Phenotype Networks: The Case of Type 2 Diabetes in East Asian Populations. Genetic Epidemiology. PMID 27061195 DOI: 10.1002/Gepi.21964  1
2016 Li J, Malley JD, Andrew AS, Karagas MR, Moore JH. Detecting gene-gene interactions using a permutation-based random forest method. Biodata Mining. 9: 14. PMID 27053949 DOI: 10.1186/S13040-016-0093-5  1
2016 Huang M, Graham BE, Zhang G, Harder R, Kodaman N, Moore JH, Muglia L, Williams SM. Evolutionary triangulation: informing genetic association studies with evolutionary evidence. Biodata Mining. 9: 12. PMID 27042214 DOI: 10.1186/S13040-016-0091-7  1
2016 Tragante V, Asselbergs FW, Swerdlow DI, Palmer TM, Moore JH, de Bakker PI, Keating BJ, Holmes MV. Harnessing publicly available genetic data to prioritize lipid modifying therapeutic targets for prevention of coronary heart disease based on dysglycemic risk. Human Genetics. PMID 26946290 DOI: 10.1007/S00439-016-1647-9  0.68
2016 Sobota RS, Stein CM, Kodaman N, Scheinfeldt LB, Maro I, Wieland-Alter W, Igo RP, Magohe A, Malone LL, Chervenak K, Hall NB, Modongo C, Zetola N, Matee M, Joloba M, ... ... Moore JH, et al. A Locus at 5q33.3 Confers Resistance to Tuberculosis in Highly Susceptible Individuals. American Journal of Human Genetics. 98: 514-524. PMID 26942285 DOI: 10.1016/J.Ajhg.2016.01.015  1
2016 Himmelstein DS, Greene CS, Moore JH. Erratum to: Evolving hard problems: generating human genetics datasets with a complex etiology. Biodata Mining. 9: 9. PMID 26848312 DOI: 10.1186/S13040-016-0085-5  1
2016 Du L, Huang H, Yan J, Kim S, Risacher SL, Inlow M, Moore JH, Saykin AJ, Shen L. Structured Sparse Canonical Correlation Analysis for Brain Imaging Genetics: An Improved GraphNet Method. Bioinformatics (Oxford, England). PMID 26801960 DOI: 10.1093/Bioinformatics/Btw033  1
2016 Darabos C, Qiu J, Moore JH. AN INTEGRATED NETWORK APPROACH TO IDENTIFYING BIOLOGICAL PATHWAYS AND ENVIRONMENTAL EXPOSURE INTERACTIONS IN COMPLEX DISEASES. Pacific Symposium On Biocomputing. Pacific Symposium On Biocomputing. 21: 9-20. PMID 26776169  1
2016 Madan JC, Hoen AG, Lundgren SN, Farzan SF, Cottingham KL, Morrison HG, Sogin ML, Li H, Moore JH, Karagas MR. Association of Cesarean Delivery and Formula Supplementation With the Intestinal Microbiome of 6-Week-Old Infants. Jama Pediatrics. 1-8. PMID 26752321 DOI: 10.1001/Jamapediatrics.2015.3732  1
2016 Yao X, Yan J, Ginda M, Börner K, Kim S, Nho K, Risacher SL, Foroud TM, Potkin SG, Thompson PM, Moore JH, Weiner MW, Saykin AJ, Shen L. The Growth And Impact Of Adni Genetics Publications As Measured By Science Mapping Alzheimers & Dementia. 12. DOI: 10.1016/J.Jalz.2016.06.105  0.72
2015 De R, Hu T, Moore JH, Gilbert-Diamond D. Characterizing gene-gene interactions in a statistical epistasis network of twelve candidate genes for obesity. Biodata Mining. 8: 45. PMID 26715945 DOI: 10.1186/S13040-015-0077-X  1
2015 Fan R, Wang Y, Chiu CY, Chen W, Ren H, Li Y, Boehnke M, Amos CI, Moore JH, Xiong M. Meta-analysis of Complex Diseases at Gene Level by Generalized Functional Linear Models. Genetics. PMID 26715663 DOI: 10.1534/Genetics.115.180869  1
2015 Hu T, Andrew AS, Karagas MR, Moore JH. Functional dyadicity and heterophilicity of gene-gene interactions in statistical epistasis networks. Biodata Mining. 8: 43. PMID 26697115 DOI: 10.1186/S13040-015-0062-4  1
2015 De R, Verma SS, Drenos F, Holzinger ER, Holmes MV, Hall MA, Crosslin DR, Carrell DS, Hakonarson H, Jarvik G, Larson E, Pacheco JA, Rasmussen-Torvik LJ, Moore CB, Asselbergs FW, ... Moore JH, et al. Identifying gene-gene interactions that are highly associated with Body Mass Index using Quantitative Multifactor Dimensionality Reduction (QMDR). Biodata Mining. 8: 41. PMID 26674805 DOI: 10.1186/S13040-015-0074-0  1
2015 Du L, Yan J, Kim S, Risacher SL, Huang H, Inlow M, Moore JH, Saykin AJ, Shen L. GN-SCCA: GraphNet based Sparse Canonical Correlation Analysis for Brain Imaging Genetics. Brain Informatics and Health : 8th International Conference, Bih 2015, London, Uk, August 30-September 2, 2015. Proceedings / Yike Guo, Karl Friston, Faisal Aldo, Sean Hill, Hanchuan Peng (Eds.). Bih (Conference) (8th : 2015 : London, E.... 9250: 275-284. PMID 26636135  0.72
2015 Yao X, Yan J, Kim S, Nho K, Risacher SL, Inlow M, Moore JH, Saykin AJ, Shen L. Two-dimensional Enrichment Analysis for Mining High-level Imaging Genetic Associations. Brain Informatics and Health : 8th International Conference, Bih 2015, London, Uk, August 30-September 2, 2015. Proceedings / Yike Guo, Karl Friston, Faisal Aldo, Sean Hill, Hanchuan Peng (Eds.). Bih (Conference) (8th : 2015 : London, E.... 9250: 115-124. PMID 26568986 DOI: 10.1007/978-3-319-23344-4_12  1
2015 Keating BJ, Setten Jv, Jacobson PA, Holmes MV, Verma SS, Chandrupatla HR, Nair N, Gao H, Li YR, Chang B, Wong C, Phillips R, Cole BS, Mukhtar E, Zhang W, ... ... Moore JH, et al. Design and Implementation of the International Genetics and Translational Research in Transplantation Network Transplantation. 99: 2401-2412. PMID 26479416 DOI: 10.1097/Tp.0000000000000913  0.8
2015 Frost HR, Li Z, Asselbergs FW, Moore JH. An Independent Filter for Gene Set Testing Based on Spectral Enrichment. Ieee/Acm Transactions On Computational Biology and Bioinformatics / Ieee, Acm. 12: 1076-86. PMID 26451820 DOI: 10.1109/Tcbb.2015.2415815  1
2015 Urbanowicz RJ, Moore JH. ExSTraCS 2.0: Description and Evaluation of a Scalable Learning Classifier System. Evolutionary Intelligence. 8: 89-116. PMID 26417393 DOI: 10.1007/S12065-015-0128-8  1
2015 White MJ, Kodaman NM, Harder RH, Asselbergs FW, Vaughan DE, Brown NJ, Moore JH, Williams SM. Genetics of Plasminogen Activator Inhibitor-1 (PAI-1) in a Ghanaian Population. Plos One. 10: e0136379. PMID 26322636 DOI: 10.1371/Journal.Pone.0136379  1
2015 Siwo GH, Williams SM, Moore JH. Erratum to: The future of genomic medicine education in Africa. Genome Medicine. 7: 70. PMID 26321605 DOI: 10.1186/S13073-015-0193-8  0.76
2015 Frost HR, Li Z, Moore JH. Principal component gene set enrichment (PCGSE). Biodata Mining. 8: 25. PMID 26300978 DOI: 10.1186/S13040-015-0059-Z  0.8
2015 Siwo GH, Williams SM, Moore JH. The future of genomic medicine education in Africa. Genome Medicine. 7: 47. PMID 26246857 DOI: 10.1186/S13073-015-0175-X  0.76
2015 Weiss TL, Zieselman A, Hill DP, Diamond SG, Shen L, Saykin AJ, Moore JH. The role of visualization and 3-D printing in biological data mining. Biodata Mining. 8: 22. PMID 26246856 DOI: 10.1186/S13040-015-0056-2  0.72
2015 Gui J, Greene CS, Sullivan C, Taylor W, Moore JH, Kim C. Testing multiple hypotheses through IMP weighted FDR based on a genetic functional network with application to a new zebrafish transcriptome study. Biodata Mining. 8: 17. PMID 26097506 DOI: 10.1186/S13040-015-0050-8  1
2015 Williams SM, Moore JH. Lumping versus splitting: the need for biological data mining in precision medicine. Biodata Mining. 8: 16. PMID 26085842 DOI: 10.1186/S13040-015-0049-1  1
2015 Caramori ML, Kim Y, Natarajan R, Moore JH, Rich SS, Mychaleckyj JC, Kuriyama R, Kirkpatrick D, Mauer M. Differential Response to High Glucose in Skin Fibroblasts of Monozygotic Twins Discordant for Type 1 Diabetes. The Journal of Clinical Endocrinology and Metabolism. 100: E883-9. PMID 25901990 DOI: 10.1210/Jc.2014-4467  1
2015 Frost HR, Li Z, Moore JH. Spectral gene set enrichment (SGSE). Bmc Bioinformatics. 16: 70. PMID 25879888 DOI: 10.1186/S12859-015-0490-7  1
2015 Caramori ML, Kim Y, Goldfine AB, Moore JH, Rich SS, Mychaleckyj JC, Kirkpatrick D, Nickerson H, Krolewski AS, Mauer M. Differential Gene Expression in Diabetic Nephropathy in Individuals With Type 1 Diabetes. The Journal of Clinical Endocrinology and Metabolism. 100: E876-82. PMID 25871838 DOI: 10.1210/Jc.2014-4465  1
2015 Yan J, Kim S, Nho K, Chen R, Risacher SL, Moore JH, Saykin AJ, Shen L. Hippocampal transcriptome-guided genetic analysis of correlated episodic memory phenotypes in Alzheimer's disease. Frontiers in Genetics. 6: 117. PMID 25859259 DOI: 10.3389/Fgene.2015.00117  1
2015 Greene AC, Giffin KA, Greene CS, Moore JH. Adapting bioinformatics curricula for big data. Briefings in Bioinformatics. PMID 25829469 DOI: 10.1093/Bib/Bbv018  1
2015 Hoen AG, Li J, Moulton LA, O'Toole GA, Housman ML, Koestler DC, Guill MF, Moore JH, Hibberd PL, Morrison HG, Sogin ML, Karagas MR, Madan JC. Associations between Gut Microbial Colonization in Early Life and Respiratory Outcomes in Cystic Fibrosis. The Journal of Pediatrics. 167: 138-147.e3. PMID 25818499 DOI: 10.1016/J.Jpeds.2015.02.049  1
2015 Dahal K, Sharma SP, Fung E, Lee J, Moore JH, Unterborn JN, Williams SM. Meta-analysis of Randomized Controlled Trials of Genotype-guided versus Standard Dosing of Warfarin. Chest. PMID 25811981 DOI: 10.1378/Chest.14-2947  1
2015 Beaulieu-Jones BR, O'Brien DM, Hopkins SE, Moore JH, Boyer BB, Gilbert-Diamond D. Sex, Adiposity, and Hypertension Status Modify the Inverse Effect of Marine Food Intake on Blood Pressure in Alaska Native (Yup'ik) People. The Journal of Nutrition. 145: 931-8. PMID 25788581 DOI: 10.3945/Jn.114.209619  1
2015 Ma S, Johnson D, Ashby C, Xiong D, Cramer CL, Moore JH, Zhang S, Huang X. SPARCoC: a new framework for molecular pattern discovery and cancer gene identification. Plos One. 10: e0117135. PMID 25768286 DOI: 10.1371/Journal.Pone.0117135  1
2015 White MJ, Eren F, A??rba?l? D, Chen J, Hu T, Moore JH, Williams SM, A??rba?l? M. A systems genetics approach to dyslipidemia in children and adolescents. Omics : a Journal of Integrative Biology. 19: 248-59. PMID 25671407 DOI: 10.1089/Omi.2014.0140  1
2015 Huang X, Jennings SF, Bruce B, Buchan A, Cai L, Chen P, Cramer CL, Guan W, Hilgert UK, Jiang H, Li Z, McClure G, McMullen DF, Nanduri B, Perkins A, ... ... Moore JH, et al. Big data - a 21st century science Maginot Line? No-boundary thinking: shifting from the big data paradigm. Biodata Mining. 8: 7. PMID 25670967 DOI: 10.1186/S13040-015-0037-5  1
2015 Pattin KA, Greene AC, Altman RB, Cohen KB, Wethington E, Görg C, Hunter LE, Muse SV, Radivojac P, Moore JH. Training the next generation of quantitative biologists in the era of big data. Pacific Symposium On Biocomputing. Pacific Symposium On Biocomputing. 488-92. PMID 25592609  1
2015 Hu T, Darabos C, Cricco ME, Kong E, Moore JH. Genome-wide genetic interaction analysis of glaucoma using expert knowledge derived from human phenotype networks. Pacific Symposium On Biocomputing. Pacific Symposium On Biocomputing. 207-18. PMID 25592582  1
2015 Frost HR, Andrew AS, Karagas MR, Moore JH. A screening-testing approach for detecting gene-environment interactions using sequential penalized and unpenalized multiple logistic regression. Pacific Symposium On Biocomputing. Pacific Symposium On Biocomputing. 183-94. PMID 25592580  1
2015 Darabos C, Grussing ED, Cricco ME, Clark KA, Moore JH. A bipartite network approach to inferring interactions between environmental exposures and human diseases. Pacific Symposium On Biocomputing. Pacific Symposium On Biocomputing. 171-82. PMID 25592579  1
2015 Moore JH, Hill DP. Epistasis analysis using artificial intelligence. Methods in Molecular Biology (Clifton, N.J.). 1253: 327-46. PMID 25403541 DOI: 10.1007/978-1-4939-2155-3_18  1
2015 Moore JH, Andrews PC. Epistasis analysis using multifactor dimensionality reduction. Methods in Molecular Biology (Clifton, N.J.). 1253: 301-14. PMID 25403539 DOI: 10.1007/978-1-4939-2155-3_16  1
2015 Darabos C, Moore JH. Genome-wide epistasis and pleiotropy characterized by the bipartite human phenotype network. Methods in Molecular Biology (Clifton, N.J.). 1253: 269-83. PMID 25403537 DOI: 10.1007/978-1-4939-2155-3_14  1
2015 Moore JH, Hu T. Epistasis analysis using information theory. Methods in Molecular Biology (Clifton, N.J.). 1253: 257-68. PMID 25403536 DOI: 10.1007/978-1-4939-2155-3_13  1
2015 Moore JH, Amos R, Kiralis J, Andrews PC. Heuristic identification of biological architectures for simulating complex hierarchical genetic interactions. Genetic Epidemiology. 39: 25-34. PMID 25395175 DOI: 10.1002/Gepi.21865  1
2015 Chen HS, Hutter CM, Mechanic LE, Amos CI, Bafna V, Hauser ER, Hernandez RD, Li C, Liberles DA, McAllister K, Moore JH, Paltoo DN, Papanicolaou GJ, Peng B, Ritchie MD, et al. Genetic simulation tools for post-genome wide association studies of complex diseases. Genetic Epidemiology. 39: 11-9. PMID 25371374 DOI: 10.1002/Gepi.21870  1
2015 Andrew AS, Gui J, Hu T, Wyszynski A, Marsit CJ, Kelsey KT, Schned AR, Tanyos SA, Pendleton EM, Ekstrom RM, Li Z, Zens MS, Borsuk M, Moore JH, Karagas MR. Genetic polymorphisms modify bladder cancer recurrence and survival in a USA population-based prognostic study. Bju International. 115: 238-47. PMID 24666523 DOI: 10.1111/Bju.12641  1
2015 Chen Y, Liu X, Liu J, Taylor W, Moore JH. Delay-tolerant networks and network coding Computer Networks. 83: 349-362. DOI: 10.1016/J.Comnet.2015.04.002  0.88
2014 Malley JD, Malley KG, Moore JH. O brave new world that has such machines in it. Biodata Mining. 7: 26. PMID 25780388 DOI: 10.1186/1756-0381-7-26  0.44
2014 Pouladi N, Cowper-Sallari R, Moore JH. Combining functional genomics strategies identifies modular heterogeneity of breast cancer intrinsic subtypes. Biodata Mining. 7: 27. PMID 25745517 DOI: 10.1186/1756-0381-7-27  0.64
2014 Andrew AS, Marsit CJ, Schned AR, Seigne JD, Kelsey KT, Moore JH, Perreard L, Karagas MR, Sempere LF. Expression of tumor suppressive microRNA-34a is associated with a reduced risk of bladder cancer recurrence. International Journal of Cancer. Journal International Du Cancer. PMID 25556547 DOI: 10.1002/Ijc.29413  1
2014 Chernikova DA, Koestler DC, Hoen AG, Housman ML, Hibberd PL, Moore JH, Morrison HG, Sogin ML, Zain-Ul-Abideen M, Madan JC. Fetal exposures and perinatal influences on the stool microbiota of premature infants. The Journal of Maternal-Fetal & Neonatal Medicine : the Official Journal of the European Association of Perinatal Medicine, the Federation of Asia and Oceania Perinatal Societies, the International Society of Perinatal Obstetricians. 1-7. PMID 25394613 DOI: 10.3109/14767058.2014.987748  1
2014 Du L, Jingwen Y, Kim S, Risacher SL, Huang H, Inlow M, Moore JH, Saykin AJ, Shen L. A novel structure-aware sparse learning algorithm for brain imaging genetics. Medical Image Computing and Computer-Assisted Intervention : Miccai ... International Conference On Medical Image Computing and Computer-Assisted Intervention. 17: 329-36. PMID 25320816  0.72
2014 Gorlov IP, Moore JH, Peng B, Jin JL, Gorlova OY, Amos CI. SNP characteristics predict replication success in association studies. Human Genetics. 133: 1477-86. PMID 25273843 DOI: 10.1007/S00439-014-1493-6  1
2014 Davis MA, Gilbert-Diamond D, Karagas MR, Li Z, Moore JH, Williams SM, Frost HR. A dietary-wide association study (DWAS) of environmental metal exposure in US children and adults. Plos One. 9: e104768. PMID 25198543 DOI: 10.1371/Journal.Pone.0104768  1
2014 Zieselman AL, Fisher JM, Hu T, Andrews PC, Greene CS, Shen L, Saykin AJ, Moore JH. Computational genetics analysis of grey matter density in Alzheimer's disease. Biodata Mining. 7: 17. PMID 25165488 DOI: 10.1186/1756-0381-7-17  1
2014 Yan J, Du L, Kim S, Risacher SL, Huang H, Moore JH, Saykin AJ, Shen L. Transcriptome-guided amyloid imaging genetic analysis via a novel structured sparse learning algorithm. Bioinformatics (Oxford, England). 30: i564-71. PMID 25161248 DOI: 10.1093/Bioinformatics/Btu465  1
2014 Hu T, Banzhaf W, Moore JH. The effects of recombination on phenotypic exploration and robustness in evolution. Artificial Life. 20: 457-70. PMID 25148550 DOI: 10.1162/Artl_A_00145  1
2014 Pechenick DA, Payne JL, Moore JH. Phenotypic robustness and the assortativity signature of human transcription factor networks. Plos Computational Biology. 10: e1003780. PMID 25121490 DOI: 10.1371/Journal.Pcbi.1003780  1
2014 Penrod NM, Moore JH. Data science approaches to pharmacogenetics. Current Molecular Medicine. 14: 805-13. PMID 25109795 DOI: 10.2174/1566524014666140811112438  1
2014 Malley JD, Moore JH. First complex, then simple. Biodata Mining. 7: 13. PMID 25076985 DOI: 10.1186/1756-0381-7-13  0.44
2014 Ciesielski TH, Pendergrass SA, White MJ, Kodaman N, Sobota RS, Huang M, Bartlett J, Li J, Pan Q, Gui J, Selleck SB, Amos CI, Ritchie MD, Moore JH, Williams SM. Diverse convergent evidence in the genetic analysis of complex disease: coordinating omic, informatic, and experimental evidence to better identify and validate risk factors. Biodata Mining. 7: 10. PMID 25071867 DOI: 10.1186/1756-0381-7-10  1
2014 Malley JD, Moore JH. Innovation is often unnerving: the door into summer. Biodata Mining. 7: 12. PMID 25057294 DOI: 10.1186/1756-0381-7-12  0.44
2014 Urbanowicz RJ, Granizo-Mackenzie AL, Kiralis J, Moore JH. A classification and characterization of two-locus, pure, strict, epistatic models for simulation and detection. Biodata Mining. 7: 8. PMID 25057293 DOI: 10.1186/1756-0381-7-8  1
2014 Mackay TF, Moore JH. Why epistasis is important for tackling complex human disease genetics. Genome Medicine. 6: 42. PMID 25031624 DOI: 10.1186/Gm561  1
2014 Penrod NM, Greene CS, Moore JH. Predicting targeted drug combinations based on Pareto optimal patterns of coexpression network connectivity. Genome Medicine. 6: 33. PMID 24944582 DOI: 10.1186/Gm550  1
2014 White MJ, Tacconelli A, Chen JS, Wejse C, Hill PC, Gomes VF, Velez-Edwards DR, Østergaard LJ, Hu T, Moore JH, Novelli G, Scott WK, Williams SM, Sirugo G. Epiregulin (EREG) and human V-ATPase (TCIRG1): genetic variation, ethnicity and pulmonary tuberculosis susceptibility in Guinea-Bissau and The Gambia. Genes and Immunity. 15: 370-7. PMID 24898387 DOI: 10.1038/Gene.2014.28  1
2014 De R, Bush WS, Moore JH. Bioinformatics challenges in genome-wide association studies (GWAS). Methods in Molecular Biology (Clifton, N.J.). 1168: 63-81. PMID 24870131 DOI: 10.1007/978-1-4939-0847-9_5  1
2014 Greene CS, Tan J, Ung M, Moore JH, Cheng C. Big data bioinformatics. Journal of Cellular Physiology. 229: 1896-900. PMID 24799088 DOI: 10.1002/Jcp.24662  1
2014 Ahles TA, Li Y, McDonald BC, Schwartz GN, Kaufman PA, Tsongalis GJ, Moore JH, Saykin AJ. Longitudinal assessment of cognitive changes associated with adjuvant treatment for breast cancer: the impact of APOE and smoking. Psycho-Oncology. 23: 1382-90. PMID 24789331 DOI: 10.1002/Pon.3545  1
2014 Hu T, Pan Q, Andrew AS, Langer JM, Cole MD, Tomlinson CR, Karagas MR, Moore JH. Functional genomics annotation of a statistical epistasis network associated with bladder cancer susceptibility. Biodata Mining. 7: 5. PMID 24725556 DOI: 10.1186/1756-0381-7-5  1
2014 Tragante V, Moore JH, Asselbergs FW. The ENCODE project and perspectives on pathways. Genetic Epidemiology. 38: 275-80. PMID 24723339 DOI: 10.1002/Gepi.21802  0.48
2014 Dasgupta A, Szymczak S, Moore JH, Bailey-Wilson JE, Malley JD. Risk estimation using probability machines. Biodata Mining. 7: 2. PMID 24581306 DOI: 10.1186/1756-0381-7-2  1
2014 Huang J, Huffman JE, Yamakuchi M, Yamkauchi M, Trompet S, Asselbergs FW, Sabater-Lleal M, Trégouët DA, Chen WM, Smith NL, Kleber ME, Shin SY, Becker DM, Tang W, Dehghan A, ... ... Moore JH, et al. Genome-wide association study for circulating tissue plasminogen activator levels and functional follow-up implicates endothelial STXBP5 and STX2. Arteriosclerosis, Thrombosis, and Vascular Biology. 34: 1093-101. PMID 24578379 DOI: 10.1161/Atvbaha.113.302088  1
2014 Frost HR, Moore JH. Optimization of gene set annotations via entropy minimization over variable clusters (EMVC). Bioinformatics (Oxford, England). 30: 1698-706. PMID 24574114 DOI: 10.1093/Bioinformatics/Btu110  1
2014 Pan Q, Hu T, Malley JD, Andrew AS, Karagas MR, Moore JH. A system-level pathway-phenotype association analysis using synthetic feature random forest. Genetic Epidemiology. 38: 209-19. PMID 24535726 DOI: 10.1002/Gepi.21794  1
2014 Penrod NM, Moore JH. Influence networks based on coexpression improve drug target discovery for the development of novel cancer therapeutics. Bmc Systems Biology. 8: 12. PMID 24495353 DOI: 10.1186/1752-0509-8-12  1
2014 Darabos C, White MJ, Graham BE, Leung DN, Williams SM, Moore JH. The multiscale backbone of the human phenotype network based on biological pathways. Biodata Mining. 7: 1. PMID 24460644 DOI: 10.1186/1756-0381-7-1  1
2014 Pattin KA, Greene AC, Altman RB, Hunter LE, Ross DA, Foster JA, Moore JH. Building the next generation of quantitative biologists. Pacific Symposium On Biocomputing. Pacific Symposium On Biocomputing. 417-21. PMID 24297567  1
2014 Darabos C, Harmon SH, Moore JH. Using the bipartite human phenotype network to reveal pleiotropy and epistasis beyond the gene. Pacific Symposium On Biocomputing. Pacific Symposium On Biocomputing. 188-99. PMID 24297546  1
2014 Shen L, Thompson PM, Potkin SG, Bertram L, Farrer LA, Foroud TM, Green RC, Hu X, Huentelman MJ, Kim S, Kauwe JS, Li Q, Liu E, Macciardi F, Moore JH, et al. Genetic analysis of quantitative phenotypes in AD and MCI: imaging, cognition and biomarkers. Brain Imaging and Behavior. 8: 183-207. PMID 24092460 DOI: 10.1007/S11682-013-9262-Z  1
2014 Koestler DC, Li J, Baron JA, Tsongalis GJ, Butterly LF, Goodrich M, Lesseur C, Karagas MR, Marsit CJ, Moore JH, Andrew AS, Srivastava A. Distinct patterns of DNA methylation in conventional adenomas involving the right and left colon. Modern Pathology : An Official Journal of the United States and Canadian Academy of Pathology, Inc. 27: 145-55. PMID 23868178 DOI: 10.1038/Modpathol.2013.104  1
2014 Payne JL, Moore JH, Wagner A. Robustness, evolvability, and the logic of genetic regulation. Artificial Life. 20: 111-26. PMID 23373974 DOI: 10.1162/Artl_A_00099  1
2014 Moore J, Schleppegrell M. Using a functional linguistics metalanguage to support academic language development in the English Language Arts Linguistics and Education. 26: 92-105. DOI: 10.1016/J.Linged.2014.01.002  0.32
2014 Yao X, Chen R, Kim S, Yan J, Du L, Nho KT, Foroud T, Moore J, Weiner MW, Saykin AJ, Shen L. Genetic Findings Using Adni Multimodal Quantitative Phenotypes: A Review Of Papers Published In 2013 Alzheimers & Dementia. 10: 351. DOI: 10.1016/J.Jalz.2014.05.184  0.72
2014 Yan J, Kim S, Nho KT, Risacher SL, Moore J, Saykin AJ, Shen L. Effects Of Newly Identified Top Ad Candidate Genes On Memory Performance: Snp, Gene, And Epistasis Analyses In Adni Alzheimers & Dementia. 10: 388. DOI: 10.1016/J.Jalz.2014.05.180  0.72
2014 Yan J, Kim S, Nho KT, Risacher SL, Moore J, Saykin AJ, Shen L. Genome-Wide Protein Interaction Guided Epistatic Analysis On Memory Performance: An Adni Study Alzheimers & Dementia. 10. DOI: 10.1016/J.Jalz.2014.05.179  0.72
2013 Yan J, Huang H, Risacher SL, Kim S, Inlow M, Moore JH, Saykin AJ, Shen L. Network-Guided Sparse Learning for Predicting Cognitive Outcomes from MRI Measures. Multimodal Brain Image Analysis : Third International Workshop, Mbia 2013, Held in Conjunction With Miccai 2013, Nagoya, Japan, September 22, 2013 : Proceedings / Li Shen, Tianming Liu, Pew-Thian Yap, Heng Huang, Dinggang Shen, Carl-Fre.... 8159: 202-210. PMID 25927078 DOI: 10.1007/978-3-319-02126-3_20  1
2013 Rudd J, Moore JH, Urbanowicz RJ. A Multi-Core Parallelization Strategy for Statistical Significance Testing in Learning Classifier Systems. Evolutionary Intelligence. 6. PMID 24358057 DOI: 10.1007/S12065-013-0092-0  1
2013 Williams SM, Moore JH. Big Data analysis on autopilot? Biodata Mining. 6: 22. PMID 24314297 DOI: 10.1186/1756-0381-6-22  1
2013 Samuels DC, Li C, Li B, Song Z, Torstenson E, Boyd Clay H, Rokas A, Thornton-Wells TA, Moore JH, Hughes TM, Hoffman RD, Haines JL, Murdock DG, Mortlock DP, Williams SM. Recurrent tissue-specific mtDNA mutations are common in humans. Plos Genetics. 9: e1003929. PMID 24244193 DOI: 10.1371/Journal.Pgen.1003929  1
2013 Huang X, Bruce B, Buchan A, Congdon CB, Cramer CL, Jennings SF, Jiang H, Li Z, McClure G, McMullen R, Moore JH, Nanduri B, Peckham J, Perkins A, Polson SW, et al. No-boundary thinking in bioinformatics research. Biodata Mining. 6: 19. PMID 24192339 DOI: 10.1186/1756-0381-6-19  1
2013 Franceschini N, Fox E, Zhang Z, Edwards TL, Nalls MA, Sung YJ, Tayo BO, Sun YV, Gottesman O, Adeyemo A, Johnson AD, Young JH, Rice K, Duan Q, Chen F, ... ... Moore JH, et al. Genome-wide association analysis of blood-pressure traits in African-ancestry individuals reveals common associated genes in African and non-African populations. American Journal of Human Genetics. 93: 545-54. PMID 23972371 DOI: 10.1016/J.Ajhg.2013.07.010  1
2013 Moore JH, Ritchie MD. The central role of biological data mining in connecting diverse disciplines. Biodata Mining. 6: 14. PMID 23937773 DOI: 10.1186/1756-0381-6-14  0.8
2013 Malley JD, Moore JH. The disconnect between classical biostatistics and the biological data mining community. Biodata Mining. 6: 12. PMID 23880104 DOI: 10.1186/1756-0381-6-12  0.44
2013 Penrod NM, Moore JH. Key genes for modulating information flow play a temporal role as breast tumor coexpression networks are dynamically rewired by letrozole. Bmc Medical Genomics. 6: S2. PMID 23819860 DOI: 10.1186/1755-8794-6-S2-S2  1
2013 Gui J, Moore JH, Williams SM, Andrews P, Hillege HL, van der Harst P, Navis G, Van Gilst WH, Asselbergs FW, Gilbert-Diamond D. A Simple and Computationally Efficient Approach to Multifactor Dimensionality Reduction Analysis of Gene-Gene Interactions for Quantitative Traits. Plos One. 8: e66545. PMID 23805232 DOI: 10.1371/Journal.Pone.0066545  1
2013 Pan Q, Hu T, Moore JH. Epistasis, complexity, and multifactor dimensionality reduction. Methods in Molecular Biology (Clifton, N.J.). 1019: 465-77. PMID 23756906 DOI: 10.1007/978-1-62703-447-0_22  1
2013 Tsongalis GJ, Chao E, Hagenkord JM, Hambuch T, Moore JH. Bioinformatics: what the clinical laboratorian needs to know and prepare for. Clinical Chemistry. 59: 1301-5. PMID 23723312 DOI: 10.1373/Clinchem.2012.198226  1
2013 Malley JD, Dasgupta A, Moore JH. The limits of p-values for biological data mining. Biodata Mining. 6: 10. PMID 23663551 DOI: 10.1186/1756-0381-6-10  0.44
2013 Talukdar T, Moore JH, Diamond SG. Continuous correction of differential path length factor in near-infrared spectroscopy. Journal of Biomedical Optics. 18: 56001. PMID 23640027 DOI: 10.1117/1.Jbo.18.5.056001  1
2013 Pechenick DA, Moore JH, Payne JL. The influence of assortativity on the robustness and evolvability of gene regulatory networks upon gene birth. Journal of Theoretical Biology. 330: 26-36. PMID 23542384 DOI: 10.1016/J.Jtbi.2013.03.019  1
2013 Hu T, Chen Y, Kiralis JW, Moore JH. ViSEN: methodology and software for visualization of statistical epistasis networks. Genetic Epidemiology. 37: 283-5. PMID 23468157 DOI: 10.1002/Gepi.21718  1
2013 Urbanowicz RJ, Andrew AS, Karagas MR, Moore JH. Role of genetic heterogeneity and epistasis in bladder cancer susceptibility and outcome: a learning classifier system approach. Journal of the American Medical Informatics Association : Jamia. 20: 603-12. PMID 23444013 DOI: 10.1136/Amiajnl-2012-001574  1
2013 Molineros JE, Maiti AK, Sun C, Looger LL, Han S, Kim-Howard X, Glenn S, Adler A, Kelly JA, Niewold TB, Gilkeson GS, Brown EE, Alarcón GS, Edberg JC, Petri M, ... ... Moore JH, et al. Admixture mapping in lupus identifies multiple functional variants within IFIH1 associated with apoptosis, inflammation, and autoantibody production. Plos Genetics. 9: e1003222. PMID 23441136 DOI: 10.1371/Journal.Pgen.1003222  1
2013 Hu T, Andrew AS, Karagas MR, Moore JH. Statistical epistasis networks reduce the computational complexity of searching three-locus genetic models. Pacific Symposium On Biocomputing. Pacific Symposium On Biocomputing. 397-408. PMID 23424144  1
2013 Collins RL, Hu T, Wejse C, Sirugo G, Williams SM, Moore JH. Multifactor dimensionality reduction reveals a three-locus epistatic interaction associated with susceptibility to pulmonary tuberculosis. Biodata Mining. 6: 4. PMID 23418869 DOI: 10.1186/1756-0381-6-4  1
2013 Hu T, Chen Y, Kiralis JW, Collins RL, Wejse C, Sirugo G, Williams SM, Moore JH. An information-gain approach to detecting three-way epistatic interactions in genetic association studies. Journal of the American Medical Informatics Association : Jamia. 20: 630-6. PMID 23396514 DOI: 10.1136/Amiajnl-2012-001525  1
2013 Warren CA, van Opstal EJ, Riggins MS, Li Y, Moore JH, Kolling GL, Guerrant RL, Hoffman PS. Vancomycin treatment's association with delayed intestinal tissue injury, clostridial overgrowth, and recurrence of Clostridium difficile infection in mice. Antimicrobial Agents and Chemotherapy. 57: 689-96. PMID 23147742 DOI: 10.1128/Aac.00877-12  0.52
2013 Shen L, Thompson P, Potkin S, Stone D, Kim S, Nho K, Ramanan V, Green R, Foroud T, Farrer L, Moore J, Bertram L, Weiner M, Saykin A. A review of published genetic studies using ADNI multimodality quantitative phenotypes: MRI, PET, fluid biomarkers, cognition and clinical status Alzheimers & Dementia. 9: 220. DOI: 10.1016/J.Jalz.2013.05.130  0.72
2013 Yan J, Kim S, Nho K, Chen R, Risacher S, Moore J, Saykin A, Shen L. Hippocampal transcriptome-guided gene-gene interaction of memory phenotype in MCI and Alzheimer’s disease Alzheimers & Dementia. 9: 4. DOI: 10.1016/J.Jalz.2013.04.018  0.72
2012 Urbanowicz RJ, Granizo-Mackenzie A, Moore JH. An Analysis Pipeline with Statistical and Visualization-Guided Knowledge Discovery for Michigan-Style Learning Classifier Systems. Ieee Computational Intelligence Magazine. 7: 35-45. PMID 25431544 DOI: 10.1109/Mci.2012.2215124  1
2012 Sloan CD, Andrew AS, Gruber JF, Mwenda KM, Moore JH, Onega T, Karagas MR, Shi X, Duell EJ. Indoor and Outdoor Air Pollution and Lung Cancer in New Hampshire and Vermont. Toxicological and Environmental Chemistry. 94. PMID 24273369 DOI: 10.1080/02772248.2012.659930  1
2012 Bush WS, Moore JH. Chapter 11: Genome-wide association studies. Plos Computational Biology. 8: e1002822. PMID 23300413 DOI: 10.1371/Journal.Pcbi.1002822  0.84
2012 Andrew AS, Hu T, Gu J, Gui J, Ye Y, Marsit CJ, Kelsey KT, Schned AR, Tanyos SA, Pendleton EM, Mason RA, Morlock EV, Zens MS, Li Z, Moore JH, et al. HSD3B and gene-gene interactions in a pathway-based analysis of genetic susceptibility to bladder cancer. Plos One. 7: e51301. PMID 23284679 DOI: 10.1371/Journal.Pone.0051301  1
2012 Fung E, Patsopoulos NA, Belknap SM, O'Rourke DJ, Robb JF, Anderson JL, Shworak NW, Moore JH. Effect of genetic variants, especially CYP2C9 and VKORC1, on the pharmacology of warfarin. Seminars in Thrombosis and Hemostasis. 38: 893-904. PMID 23041981 DOI: 10.1055/S-0032-1328891  1
2012 Urbanowicz RJ, Kiralis J, Sinnott-Armstrong NA, Heberling T, Fisher JM, Moore JH. GAMETES: a fast, direct algorithm for generating pure, strict, epistatic models with random architectures. Biodata Mining. 5: 16. PMID 23025260 DOI: 10.1186/1756-0381-5-16  1
2012 Urbanowicz RJ, Kiralis J, Fisher JM, Moore JH. Predicting the difficulty of pure, strict, epistatic models: metrics for simulated model selection. Biodata Mining. 5: 15. PMID 23014095 DOI: 10.1186/1756-0381-5-15  1
2012 Cowper-Sal lari R, Zhang X, Wright JB, Bailey SD, Cole MD, Eeckhoute J, Moore JH, Lupien M. Breast cancer risk-associated SNPs modulate the affinity of chromatin for FOXA1 and alter gene expression. Nature Genetics. 44: 1191-8. PMID 23001124 DOI: 10.1038/Ng.2416  1
2012 Huang J, Sabater-Lleal M, Asselbergs FW, Tregouet D, Shin SY, Ding J, Baumert J, Oudot-Mellakh T, Folkersen L, Johnson AD, Smith NL, Williams SM, Ikram MA, Kleber ME, Becker DM, ... ... Moore JH, et al. Genome-wide association study for circulating levels of PAI-1 provides novel insights into its regulation. Blood. 120: 4873-81. PMID 22990020 DOI: 10.1182/Blood-2012-06-436188  1
2012 Thornley JA, Trask HW, Ringelberg CS, Ridley CJ, Wang S, Sal-Lari RC, Moore JH, Korc M, Tomlinson CR. SMAD4-dependent polysome RNA recruitment in human pancreatic cancer cells. Molecular Carcinogenesis. 51: 771-82. PMID 22965423 DOI: 10.1002/Mc.20845  0.4
2012 Madan JC, Koestler DC, Stanton BA, Davidson L, Moulton LA, Housman ML, Moore JH, Guill MF, Morrison HG, Sogin ML, Hampton TH, Karagas MR, Palumbo PE, Foster JA, Hibberd PL, et al. Serial analysis of the gut and respiratory microbiome in cystic fibrosis in infancy: interaction between intestinal and respiratory tracts and impact of nutritional exposures. Mbio. 3. PMID 22911969 DOI: 10.1128/Mbio.00251-12  1
2012 Urbach D, Lupien M, Karagas MR, Moore JH. Cancer heterogeneity: origins and implications for genetic association studies. Trends in Genetics : Tig. 28: 538-43. PMID 22858414 DOI: 10.1016/J.Tig.2012.07.001  0.48
2012 Kim NC, Andrews PC, Asselbergs FW, Frost HR, Williams SM, Harris BT, Read C, Askland KD, Moore JH. Gene ontology analysis of pairwise genetic associations in two genome-wide studies of sporadic ALS. Biodata Mining. 5: 9. PMID 22839596 DOI: 10.1186/1756-0381-5-9  1
2012 Kerley-Hamilton JS, Trask HW, Ridley CJ, Dufour E, Ringelberg CS, Nurinova N, Wong D, Moodie KL, Shipman SL, Moore JH, Korc M, Shworak NW, Tomlinson CR. Obesity is mediated by differential aryl hydrocarbon receptor signaling in mice fed a Western diet. Environmental Health Perspectives. 120: 1252-9. PMID 22609946 DOI: 10.1289/Ehp.1205003  1
2012 Madan JC, Salari RC, Saxena D, Davidson L, O'Toole GA, Moore JH, Sogin ML, Foster JA, Edwards WH, Palumbo P, Hibberd PL. Gut microbial colonisation in premature neonates predicts neonatal sepsis. Archives of Disease in Childhood. Fetal and Neonatal Edition. 97: F456-62. PMID 22562869 DOI: 10.1136/Fetalneonatal-2011-301373  1
2012 Lavender NA, Rogers EN, Yeyeodu S, Rudd J, Hu T, Zhang J, Brock GN, Kimbro KS, Moore JH, Hein DW, Kidd LC. Interaction among apoptosis-associated sequence variants and joint effects on aggressive prostate cancer. Bmc Medical Genomics. 5: 11. PMID 22546513 DOI: 10.1186/1755-8794-5-11  1
2012 Akhtar-Zaidi B, Cowper-Sal-lari R, Corradin O, Saiakhova A, Bartels CF, Balasubramanian D, Myeroff L, Lutterbaugh J, Jarrar A, Kalady MF, Willis J, Moore JH, Tesar PJ, Laframboise T, Markowitz S, et al. Epigenomic enhancer profiling defines a signature of colon cancer. Science (New York, N.Y.). 336: 736-9. PMID 22499810 DOI: 10.1126/Science.1217277  1
2012 Ramanan VK, Shen L, Moore JH, Saykin AJ. Pathway analysis of genomic data: concepts, methods, and prospects for future development. Trends in Genetics : Tig. 28: 323-32. PMID 22480918 DOI: 10.1016/J.Tig.2012.03.004  1
2012 Caramori ML, Kim Y, Moore JH, Rich SS, Mychaleckyj JC, Kikyo N, Mauer M. Gene expression differences in skin fibroblasts in identical twins discordant for type 1 diabetes Diabetes. 61: 739-744. PMID 22315306 DOI: 10.2337/Db11-0617  1
2012 Foster JA, Bunge J, Gilbert JA, Moore JH. Measuring the microbiome: perspectives on advances in DNA-based techniques for exploring microbial life. Briefings in Bioinformatics. 13: 420-9. PMID 22308073 DOI: 10.1093/Bib/Bbr080  1
2012 McAllister TW, Tyler AL, Flashman LA, Rhodes CH, McDonald BC, Saykin AJ, Tosteson TD, Tsongalis GJ, Moore JH. Polymorphisms in the brain-derived neurotrophic factor gene influence memory and processing speed one month after brain injury. Journal of Neurotrauma. 29: 1111-8. PMID 22188054 DOI: 10.1089/Neu.2011.1930  1
2012 Pechenick DA, Payne JL, Moore JH. The influence of assortativity on the robustness of signal-integration logic in gene regulatory networks. Journal of Theoretical Biology. 296: 21-32. PMID 22155134 DOI: 10.1016/J.Jtbi.2011.11.029  1
2012 Mechanic LE, Chen HS, Amos CI, Chatterjee N, Cox NJ, Divi RL, Fan R, Harris EL, Jacobs K, Kraft P, Leal SM, McAllister K, Moore JH, Paltoo DN, Province MA, et al. Next generation analytic tools for large scale genetic epidemiology studies of complex diseases. Genetic Epidemiology. 36: 22-35. PMID 22147673 DOI: 10.1002/Gepi.20652  1
2012 Karagas MR, Andrew AS, Nelson HH, Li Z, Punshon T, Schned A, Marsit CJ, Morris JS, Moore JH, Tyler AL, Gilbert-Diamond D, Guerinot ML, Kelsey KT. SLC39A2 and FSIP1 polymorphisms as potential modifiers of arsenic-related bladder cancer. Human Genetics. 131: 453-61. PMID 21947419 DOI: 10.1007/S00439-011-1090-X  1
2012 Hu T, Payne JL, Banzhaf W, Moore JH. Evolutionary dynamics on multiple scales: A quantitative analysis of the interplay between genotype, phenotype, and fitness in linear genetic programming Genetic Programming and Evolvable Machines. 13: 305-337. DOI: 10.1007/S10710-012-9159-4  1
2011 Darabos C, Di Cunto F, Tomassini M, Moore JH, Provero P, Giacobini M. Additive functions in boolean models of gene regulatory network modules Plos One. 6. PMID 22132067 DOI: 10.1371/Journal.Pone.0025110  1
2011 Hu T, Sinnott-Armstrong NA, Kiralis JW, Andrew AS, Karagas MR, Moore JH. Characterizing genetic interactions in human disease association studies using statistical epistasis networks. Bmc Bioinformatics. 12: 364. PMID 21910885 DOI: 10.1186/1471-2105-12-364  1
2011 Penrod NM, Cowper-Sal-lari R, Moore JH. Systems genetics for drug target discovery. Trends in Pharmacological Sciences. 32: 623-30. PMID 21862141 DOI: 10.1016/J.Tips.2011.07.002  1
2011 Himmelstein DS, Greene CS, Moore JH. Evolving hard problems: Generating human genetics datasets with a complex etiology. Biodata Mining. 4: 21. PMID 21736753 DOI: 10.1186/1756-0381-4-21  1
2011 Gilbert-Diamond D, Moore JH. Analysis of gene-gene interactions. Current Protocols in Human Genetics. Unit1.14. PMID 21735376 DOI: 10.1002/0471142905.Hg0114S70  1
2011 Coffey CS, Asselbergs FW, Hebert PR, Hillege HL, Li Q, Moore JH, van Gilst WH. The Association of the Metabolic Syndrome with PAI-1 and t-PA Levels. Cardiology Research and Practice. 2011: 541467. PMID 21559217 DOI: 10.4061/2011/541467  0.48
2011 Penrod NM, Poku KA, Vaughan DE, Vaughn DE, Asselbergs FW, Brown NJ, Moore JH, Williams SM. Epistatic interactions in genetic regulation of t-PA and PAI-1 levels in a Ghanaian population. Plos One. 6: e16639. PMID 21304999 DOI: 10.1371/Journal.Pone.0016639  1
2011 Cowper-Sal lari R, Cole MD, Karagas MR, Lupien M, Moore JH. Layers of epistasis: genome-wide regulatory networks and network approaches to genome-wide association studies. Wiley Interdisciplinary Reviews. Systems Biology and Medicine. 3: 513-26. PMID 21197657 DOI: 10.1002/Wsbm.132  1
2011 Wishart HA, Roth RM, Saykin AJ, Rhodes CH, Tsongalis GJ, Pattin KA, Moore JH, McAllister TW. COMT Val158Met Genotype and Individual Differences in Executive Function in Healthy Adults. Journal of the International Neuropsychological Society : Jins. 17: 174-80. PMID 21144101 DOI: 10.1017/S1355617710001402  1
2011 Gui J, Andrew AS, Andrews P, Nelson HM, Kelsey KT, Karagas MR, Moore JH. A robust multifactor dimensionality reduction method for detecting gene-gene interactions with application to the genetic analysis of bladder cancer susceptibility. Annals of Human Genetics. 75: 20-8. PMID 21091664 DOI: 10.1111/J.1469-1809.2010.00624.X  1
2011 Gui J, Moore JH, Kelsey KT, Marsit CJ, Karagas MR, Andrew AS. A novel survival multifactor dimensionality reduction method for detecting gene-gene interactions with application to bladder cancer prognosis. Human Genetics. 129: 101-10. PMID 20981448 DOI: 10.1007/S00439-010-0905-5  1
2011 Andrew AS, Gui J, Moore JH, Karagas MR, Pendleton E, Schned AR, Mason RA, Wyszynski A, Tanyos SA, Kelsey KT, Marsit CJ, Zens MS. Abstract A66: Apoptosis, cell cycle, DNA repair, immune, and metabolism pathway SNPs modify bladder cancer risk, recurrence, and survival Cancer Prevention Research. 4. DOI: 10.1158/1940-6207.Prev-11-A66  0.48
2010 Pattin KA, Moore JH. Genome-wide association studies for the identification of biomarkers in metabolic diseases. Expert Opinion On Medical Diagnostics. 4: 39-51. PMID 23496109 DOI: 10.1517/17530050903322245  1
2010 Gui J, Andrew AS, Andrews P, Nelson HM, Kelsey KT, Karagas MR, Moore JH. A simple and computationally efficient sampling approach to covariate adjustment for multifactor dimensionality reduction analysis of epistasis. Human Heredity. 70: 219-25. PMID 20924193 DOI: 10.1159/000319175  1
2010 Bentley JP, Asselbergs FW, Coffey CS, Hebert PR, Moore JH, Hillege HL, van Gilst WH. Cardiovascular risk associated with interactions among polymorphisms in genes from the renin-angiotensin, bradykinin, and fibrinolytic systems. Plos One. 5: e12757. PMID 20856803 DOI: 10.1371/Journal.Pone.0012757  0.48
2010 Payne JL, Sinnott-Armstrong NA, Moore JH. Exploiting graphics processing units for computational biology and bioinformatics. Interdisciplinary Sciences, Computational Life Sciences. 2: 213-20. PMID 20658333 DOI: 10.1007/S12539-010-0002-4  1
2010 Eichler EE, Flint J, Gibson G, Kong A, Leal SM, Moore JH, Nadeau JH. Missing heritability and strategies for finding the underlying causes of complex disease. Nature Reviews. Genetics. 11: 446-50. PMID 20479774 DOI: 10.1038/Nrg2809  1
2010 Sloan CD, Shen L, West JD, Wishart HA, Flashman LA, Rabin LA, Santulli RB, Guerin SJ, Rhodes CH, Tsongalis GJ, McAllister TW, Ahles TA, Lee SL, Moore JH, Saykin AJ. Genetic pathway-based hierarchical clustering analysis of older adults with cognitive complaints and amnestic mild cognitive impairment using clinical and neuroimaging phenotypes. American Journal of Medical Genetics. Part B, Neuropsychiatric Genetics : the Official Publication of the International Society of Psychiatric Genetics. 153: 1060-9. PMID 20468060 DOI: 10.1002/Ajmg.B.31078  1
2010 Saykin AJ, Shen L, Foroud TM, Potkin SG, Swaminathan S, Kim S, Risacher SL, Nho K, Huentelman MJ, Craig DW, Thompson PM, Stein JL, Moore JH, Farrer LA, Green RC, et al. Alzheimer's Disease Neuroimaging Initiative biomarkers as quantitative phenotypes: Genetics core aims, progress, and plans. Alzheimer's & Dementia : the Journal of the Alzheimer's Association. 6: 265-73. PMID 20451875 DOI: 10.1016/J.Jalz.2010.03.013  1
2010 Shen L, Kim S, Risacher SL, Nho K, Swaminathan S, West JD, Foroud T, Pankratz N, Moore JH, Sloan CD, Huentelman MJ, Craig DW, Dechairo BM, Potkin SG, Jack CR, et al. Whole genome association study of brain-wide imaging phenotypes for identifying quantitative trait loci in MCI and AD: A study of the ADNI cohort. Neuroimage. 53: 1051-63. PMID 20100581 DOI: 10.1016/J.Neuroimage.2010.01.042  1
2010 Greene CS, Sinnott-Armstrong NA, Himmelstein DS, Park PJ, Moore JH, Harris BT. Multifactor dimensionality reduction for graphics processing units enables genome-wide testing of epistasis in sporadic ALS. Bioinformatics (Oxford, England). 26: 694-5. PMID 20081222 DOI: 10.1093/Bioinformatics/Btq009  1
2010 Moore JH, Asselbergs FW, Williams SM. Bioinformatics challenges for genome-wide association studies. Bioinformatics (Oxford, England). 26: 445-55. PMID 20053841 DOI: 10.1093/Bioinformatics/Btp713  0.76
2010 Greene CS, Himmelstein DS, Nelson HH, Kelsey KT, Williams SM, Andrew AS, Karagas MR, Moore JH. Enabling personal genomics with an explicit test of epistasis. Pacific Symposium On Biocomputing. Pacific Symposium On Biocomputing. 327-36. PMID 19908385  1
2010 VanCleave TT, Moore JH, Benford ML, Brock GN, Kalbfleisch T, Baumgartner RN, Lillard JW, Kittles RA, Kidd LC. Interaction among variant vascular endothelial growth factor (VEGF) and its receptor in relation to prostate cancer risk. The Prostate. 70: 341-52. PMID 19908237 DOI: 10.1002/Pros.21067  1
2010 Lavender NA, Komolafe OO, Benford M, Brock G, Moore JH, Vancleave TT, States JC, Kittles RA, Kidd LC. No association between variant DNA repair genes and prostate cancer risk among men of African descent. The Prostate. 70: 113-9. PMID 19760636 DOI: 10.1002/Pros.21048  1
2009 Greene CS, White BC, Moore JH. Sensible Initialization Using Expert Knowledge for Genome-Wide Analysis of Epistasis Using Genetic Programming. Genetic and Evolutionary Computation Conference : [Proceedings] / Sponsored by Acm Sigevo. Genetic and Evolutionary Computation Conference. 2009: 1289-1296. PMID 21197156 DOI: 10.1109/CEC.2009.4983093  1
2009 Pattin KA, Moore JH. Role for protein-protein interaction databases in human genetics. Expert Review of Proteomics. 6: 647-59. PMID 19929610 DOI: 10.1586/Epr.09.86  1
2009 Lavender NA, Benford ML, VanCleave TT, Brock GN, Kittles RA, Moore JH, Hein DW, Kidd LC. Examination of polymorphic glutathione S-transferase (GST) genes, tobacco smoking and prostate cancer risk among men of African descent: a case-control study. Bmc Cancer. 9: 397. PMID 19917083 DOI: 10.1186/1471-2407-9-397  1
2009 Greene CS, Penrod NM, Kiralis J, Moore JH. Spatially uniform relieff (SURF) for computationally-efficient filtering of gene-gene interactions. Biodata Mining. 2: 5. PMID 19772641 DOI: 10.1186/1756-0381-2-5  1
2009 Sloan CD, Andrew AD, Duell EJ, Williams SM, Karagas MR, Moore JH. Genetic population structure analysis in New Hampshire reveals Eastern European ancestry. Plos One. 4: e6928. PMID 19738909 DOI: 10.1371/Journal.Pone.0006928  1
2009 Moore JH, Williams SM. Epistasis and its implications for personal genetics. American Journal of Human Genetics. 85: 309-20. PMID 19733727 DOI: 10.1016/J.Ajhg.2009.08.006  1
2009 Norris PR, Canter JA, Jenkins JM, Moore JH, Williams AE, Morris JA. Personalized medicine: genetic variation and loss of physiologic complexity are associated with mortality in 644 trauma patients. Annals of Surgery. 250: 524-30. PMID 19730237 DOI: 10.1097/Sla.0B013E3181B8Fb1F  1
2009 Trask HW, Cowper-Sal-lari R, Sartor MA, Gui J, Heath CV, Renuka J, Higgins AJ, Andrews P, Korc M, Moore JH, Tomlinson CR. Microarray analysis of cytoplasmic versus whole cell RNA reveals a considerable number of missed and false positive mRNAs. Rna (New York, N.Y.). 15: 1917-28. PMID 19703940 DOI: 10.1261/Rna.1677409  1
2009 Sinnott-Armstrong NA, Greene CS, Cancare F, Moore JH. Accelerating epistasis analysis in human genetics with consumer graphics hardware. Bmc Research Notes. 2: 149. PMID 19630950 DOI: 10.1186/1756-0500-2-149  1
2009 Greene CS, Penrod NM, Williams SM, Moore JH. Failure to replicate a genetic association may provide important clues about genetic architecture. Plos One. 4: e5639. PMID 19503614 DOI: 10.1371/Journal.Pone.0005639  1
2009 Morris JA, Norris PR, Moore JH, Jenkins JM, Williams AE, Canter JA. Genetic variation in the autonomic nervous system affects mortality: a study of 1,095 trauma patients. Journal of the American College of Surgeons. 208: 663-8; discussion 66. PMID 19476811 DOI: 10.1016/J.Jamcollsurg.2008.12.017  1
2009 Batty GD, Wang Y, Brouilette SW, Shiels P, Packard C, Moore J, Samani NJ, Ford I. Socioeconomic status and telomere length: the West of Scotland Coronary Prevention Study Journal of Epidemiology and Community Health. 63: 839-841. PMID 19468018 DOI: 10.1136/Jech.2009.088427  0.52
2009 Tishkoff SA, Reed FA, Friedlaender FR, Ehret C, Ranciaro A, Froment A, Hirbo JB, Awomoyi AA, Bodo JM, Doumbo O, Ibrahim M, Juma AT, Kotze MJ, Lema G, Moore JH, et al. The genetic structure and history of Africans and African Americans. Science (New York, N.Y.). 324: 1035-44. PMID 19407144 DOI: 10.1126/Science.1172257  1
2009 Arehart E, Gleim S, White BC, Hwa J, Moore JH. Multifactor dimensionality reduction analysis identifies specific nucleotide patterns promoting genetic polymorphisms Biodata Mining. 2: 2-2. PMID 19331672 DOI: 10.1186/1756-0381-2-2  0.48
2009 Andrew AS, Gui J, Sanderson AC, Mason RA, Morlock EV, Schned AR, Kelsey KT, Marsit CJ, Moore JH, Karagas MR. Bladder cancer SNP panel predicts susceptibility and survival. Human Genetics. 125: 527-39. PMID 19252927 DOI: 10.1007/S00439-009-0645-6  1
2009 Sile S, Velez DR, Gillani NB, Narsia T, Moore JH, George AL, Vanoye CG, Williams SM. CLCNKB-T481S and essential hypertension in a Ghanaian population. Journal of Hypertension. 27: 298-304. PMID 19226700 DOI: 10.1097/Hjh.0B013E3283140C9E  1
2009 Tyler AL, Asselbergs FW, Williams SM, Moore JH. Shadows of complexity: what biological networks reveal about epistasis and pleiotropy. Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology. 31: 220-7. PMID 19204994 DOI: 10.1002/Bies.200800022  1
2009 He X, Moore J, Shabir S, Little MA, Cockwell P, Ball S, Liu X, Johnston A, Borrows R. Comparison of the predictive performance of eGFR formulae for mortality and graft failure in renal transplant recipients Transplantation. 87: 384-392. PMID 19202443 DOI: 10.1097/Tp.0B013E31819004A1  0.56
2009 Sloan CD, Duell EJ, Shi X, Irwin R, Andrew AS, Williams SM, Moore JH. Ecogeographic genetic epidemiology. Genetic Epidemiology. 33: 281-9. PMID 19025788 DOI: 10.1002/Gepi.20386  1
2009 Reif DM, Motsinger-Reif AA, McKinney BA, Rock MT, Crowe JE, Moore JH. Integrated analysis of genetic and proteomic data identifies biomarkers associated with adverse events following smallpox vaccination. Genes and Immunity. 10: 112-9. PMID 18923431 DOI: 10.1038/Gene.2008.80  0.56
2009 Pattin KA, White BC, Barney N, Gui J, Nelson HH, Kelsey KT, Andrew AS, Karagas MR, Moore JH. A computationally efficient hypothesis testing method for epistasis analysis using multifactor dimensionality reduction. Genetic Epidemiology. 33: 87-94. PMID 18671250 DOI: 10.1002/Gepi.20360  1
2008 Sloan CD, Sayarath V, Moore JH. Systems genetics of alcoholism Alcohol Research and Health. 31: 14-25. PMID 23584748  1
2008 Urbanowicz RJ, White BC, Moore JH. Mask Functions for the Symbolic Modeling of Epistasis Using Genetic Programming. Genetic and Evolutionary Computation Conference : [Proceedings] / Sponsored by Acm Sigevo. Genetic and Evolutionary Computation Conference. 2008: 339-346. PMID 23019565  1
2008 Asselbergs FW, Pattin K, Snieder H, Hillege HL, van Gilst WH, Moore JH. Genetic architecture of tissue-type plasminogen activator and plasminogen activator inhibitor-1. Seminars in Thrombosis and Hemostasis. 34: 562-8. PMID 19085655 DOI: 10.1055/S-0028-1103367  0.48
2008 Schoenhard JA, Asselbergs FW, Poku KA, Stocki SA, Gordon S, Vaughan DE, Brown NJ, Moore JH, Williams SM. Male-female differences in the genetic regulation of t-PA and PAI-1 levels in a Ghanaian population. Human Genetics. 124: 479-88. PMID 18953568 DOI: 10.1007/S00439-008-0573-X  1
2008 Aguilar-Ruiz JS, Moore JH, Ritchie MD. Filling the gap between biology and computer science. Biodata Mining. 1: 1. PMID 18822148 DOI: 10.1186/1756-0381-1-1  0.8
2008 McAllister TW, Flashman LA, Harker Rhodes C, Tyler AL, Moore JH, Saykin AJ, McDonald BC, Tosteson TD, Tsongalis GJ. Single nucleotide polymorphisms in ANKK1 and the dopamine D2 receptor gene affect cognitive outcome shortly after traumatic brain injury: a replication and extension study. Brain Injury. 22: 705-14. PMID 18698520 DOI: 10.1080/02699050802263019  1
2008 Beretta L, Cappiello F, Moore JH, Barili M, Greene CS, Scorza R. Ability of epistatic interactions of cytokine single-nucleotide polymorphisms to predict susceptibility to disease subsets in systemic sclerosis patients. Arthritis and Rheumatism. 59: 974-83. PMID 18576303 DOI: 10.1002/Art.23836  1
2008 Duell EJ, Bracci PM, Moore JH, Burk RD, Kelsey KT, Holly EA. Detecting pathway-based gene-gene and gene-environment interactions in pancreatic cancer. Cancer Epidemiology, Biomarkers & Prevention : a Publication of the American Association For Cancer Research, Cosponsored by the American Society of Preventive Oncology. 17: 1470-9. PMID 18559563 DOI: 10.1158/1055-9965.Epi-07-2797  1
2008 Pattin KA, Moore JH. Exploiting the proteome to improve the genome-wide genetic analysis of epistasis in common human diseases. Human Genetics. 124: 19-29. PMID 18551320 DOI: 10.1007/S00439-008-0522-8  1
2008 Reif DM, McKinney BA, Motsinger AA, Chanock SJ, Edwards KM, Rock MT, Moore JH, Crowe JE. Genetic basis for adverse events after smallpox vaccination. The Journal of Infectious Diseases. 198: 16-22. PMID 18454680 DOI: 10.1086/588670  0.56
2008 Andrew AS, Jewell DA, Mason RA, Whitfield ML, Moore JH, Karagas MR. Drinking-water arsenic exposure modulates gene expression in human lymphocytes from a U.S. population. Environmental Health Perspectives. 116: 524-31. PMID 18414638 DOI: 10.1289/Ehp.10861  1
2008 Arehart E, Stitham J, Asselbergs FW, Douville K, MacKenzie T, Fetalvero KM, Gleim S, Kasza Z, Rao Y, Martel L, Segel S, Robb J, Kaplan A, Simons M, Powell RJ, ... Moore JH, et al. Acceleration of cardiovascular disease by a dysfunctional prostacyclin receptor mutation: potential implications for cyclooxygenase-2 inhibition. Circulation Research. 102: 986-93. PMID 18323528 DOI: 10.1161/Circresaha.107.165936  0.48
2008 Thornton-Wells TA, Moore JH, Martin ER, Pericak-Vance MA, Haines JL. Confronting complexity in late-onset Alzheimer disease: application of two-stage analysis approach addressing heterogeneity and epistasis. Genetic Epidemiology. 32: 187-203. PMID 18076107 DOI: 10.1002/Gepi.20294  1
2008 Andrew AS, Karagas MR, Nelson HH, Guarrera S, Polidoro S, Gamberini S, Sacerdote C, Moore JH, Kelsey KT, Demidenko E, Vineis P, Matullo G. DNA repair polymorphisms modify bladder cancer risk: a multi-factor analytic strategy. Human Heredity. 65: 105-18. PMID 17898541 DOI: 10.1159/000108942  1
2007 Ritchie MD, Motsinger AA, Bush WS, Coffey CS, Moore JH. Genetic Programming Neural Networks: A Powerful Bioinformatics Tool for Human Genetics. Applied Soft Computing. 7: 471-479. PMID 20948988 DOI: 10.1016/J.Asoc.2006.01.013  0.84
2007 Reif DM, Israel MA, Moore JH. Exploratory Visual Analysis of statistical results from microarray experiments comparing high and low grade glioma. Cancer Informatics. 5: 19-24. PMID 19390666 DOI: 10.4137/Cin.S0  1
2007 Heim KC, White KA, Deng D, Tomlinson CR, Moore JH, Freemantle SJ, Spinella MJ. Selective repression of retinoic acid target genes by RIP140 during induced tumor cell differentiation of pluripotent human embryonal carcinoma cells. Molecular Cancer. 6: 57. PMID 17880687 DOI: 10.1186/1476-4598-6-57  1
2007 Canter JA, Norris PR, Moore JH, Jenkins JM, Morris JA. Specific polymorphic variation in the mitochondrial genome and increased in-hospital mortality after severe trauma. Annals of Surgery. 246: 406-11; discussion 4. PMID 17717444 DOI: 10.1097/Sla.0B013E3181469955  1
2007 Williams SM, Canter JA, Crawford DC, Moore JH, Ritchie MD, Haines JL. Problems with genome-wide association studies. Science (New York, N.Y.). 316: 1840-2. PMID 17605173  0.8
2007 Asselbergs FW, Williams SM, Hebert PR, Coffey CS, Hillege HL, Snieder H, Navis G, Vaughan DE, van Gilst WH, Moore JH. The effects of polymorphisms in genes from the renin-angiotensin, bradykinin, and fibrinolytic systems on plasma t-PA and PAI-1 levels are dependent on environmental context. Human Genetics. 122: 275-81. PMID 17593394 DOI: 10.1007/S00439-007-0400-9  0.76
2007 McKinney BA, Reif DM, White BC, Crowe JE, Moore JH. Evaporative cooling feature selection for genotypic data involving interactions. Bioinformatics (Oxford, England). 23: 2113-20. PMID 17586549 DOI: 10.1093/Bioinformatics/Btm317  1
2007 Raj JU, Aliferis C, Caprioli RM, Cowley AW, Davies PF, Duncan MW, Erle DJ, Erzurum SC, Finn PW, Ischiropoulos H, Kaminski N, Kleeberger SR, Leikauf GD, Loyd JE, Martin TR, ... ... Moore JH, et al. Genomics and proteomics of lung disease: conference summary. American Journal of Physiology. Lung Cellular and Molecular Physiology. 293: L45-51. PMID 17468134 DOI: 10.1152/Ajplung.00139.2007  1
2007 Garcia-Barcelo M, King SK, Miao X, So Mt, Holden WT, Moore JH, Sutcliffe JR, Hutson JM, Tam PKH. Application of HapMap data to the evaluation of 8 candidate genes for pediatric slow transit constipation Journal of Pediatric Surgery. 42: 666-671. PMID 17448763 DOI: 10.1016/J.Jpedsurg.2006.12.014  1
2007 Gaur A, Jewell DA, Liang Y, Ridzon D, Moore JH, Chen C, Ambros VR, Israel MA. Characterization of microRNA expression levels and their biological correlates in human cancer cell lines. Cancer Research. 67: 2456-68. PMID 17363563 DOI: 10.1158/0008-5472.Can-06-2698  1
2007 Velez DR, White BC, Motsinger AA, Bush WS, Ritchie MD, Williams SM, Moore JH. A balanced accuracy function for epistasis modeling in imbalanced datasets using multifactor dimensionality reduction. Genetic Epidemiology. 31: 306-15. PMID 17323372 DOI: 10.1002/Gepi.20211  1
2007 Nordgard SH, Ritchie MD, Jensrud SD, Motsinger AA, Alnaes GI, Lemmon G, Berg M, Geisler S, Moore JH, Lønning PE, Børresen-Dale AL, Kristensen VN. ABCB1 and GST polymorphisms associated with TP53 status in breast cancer. Pharmacogenetics and Genomics. 17: 127-36. PMID 17301692 DOI: 10.1097/Fpc.0B013E328011Abaa  0.8
2007 Moore JH, Barney N, Tsai CT, Chiang FT, Gui J, White BC. Symbolic modeling of epistasis. Human Heredity. 63: 120-33. PMID 17283441 DOI: 10.1159/000099184  1
2007 Garcia-Barceló MM, Miao X, Lui VC, So MT, Ngan ES, Leon TY, Lau DK, Liu TT, Lao X, Guo W, Holden WT, Moore J, Tam PK. Correlation between genetic variations in Hox clusters and Hirschsprung's disease. Annals of Human Genetics. 71: 526-36. PMID 17274802 DOI: 10.1111/J.1469-1809.2007.00347.X  0.36
2007 Asselbergs FW, Williams SM, Hebert PR, Coffey CS, Hillege HL, Navis G, Vaughan DE, van Gilst WH, Moore JH. Epistatic effects of polymorphisms in genes from the renin-angiotensin, bradykinin, and fibrinolytic systems on plasma t-PA and PAI-1 levels. Genomics. 89: 362-9. PMID 17207964 DOI: 10.1016/J.Ygeno.2006.11.004  0.76
2007 Tsai CT, Hwang JJ, Ritchie MD, Moore JH, Chiang FT, Lai LP, Hsu KL, Tseng CD, Lin JL, Tseng YZ. Renin-angiotensin system gene polymorphisms and coronary artery disease in a large angiographic cohort: detection of high order gene-gene interaction. Atherosclerosis. 195: 172-80. PMID 17118372 DOI: 10.1016/J.Atherosclerosis.2006.09.014  0.8
2007 Asselbergs FW, Williams SM, Hebert PR, Coffey CS, Hillege HL, Navis G, Vaughan DE, van Gilst WH, Moore JH. Gender-specific correlations of plasminogen activator inhibitor-1 and tissue plasminogen activator levels with cardiovascular disease-related traits. Journal of Thrombosis and Haemostasis : Jth. 5: 313-20. PMID 17092303 DOI: 10.1111/J.1538-7836.2007.02311.X  0.76
2007 Lind JM, Hutcheson-Dilks HB, Williams SM, Moore JH, Essex M, Ruiz-Pesini E, Wallace DC, Tishkoff SA, O'Brien SJ, Smith MW. Elevated male European and female African contributions to the genomes of African American individuals. Human Genetics. 120: 713-22. PMID 17006671 DOI: 10.1007/S00439-006-0261-7  1
2007 Eppstein MJ, Payne JL, White BC, Moore JH. Genomic mining for complex disease traits with "random chemistry" Genetic Programming and Evolvable Machines. 8: 395-411. DOI: 10.1007/S10710-007-9039-5  1
2006 Chittenden TW, Sherman JA, Xiong F, Hall AE, Lanahan AA, Taylor JM, Duan H, Pearlman JD, Moore JH, Schwartz SM, Simons M. Transcriptional profiling in coronary artery disease: Indications for novel markers of coronary collateralization Circulation. 114: 1811-1820. PMID 17043168 DOI: 10.1161/Circulationaha.106.628396  1
2006 McKinney BA, Reif DM, Rock MT, Edwards KM, Kingsmore SF, Moore JH, Crowe JE. Cytokine expression patterns associated with systemic adverse events following smallpox immunization. The Journal of Infectious Diseases. 194: 444-53. PMID 16845627 DOI: 10.1086/505503  0.56
2006 Huang C, Kim Y, Caramori ML, Moore JH, Rich SS, Mychaleckyj JC, Walker PC, Mauer M. Diabetic nephropathy is associated with gene expression levels of oxidative phosphorylation and related pathways Diabetes. 55: 1826-1831. PMID 16731849 DOI: 10.2337/Db05-1438  1
2006 McKinney BA, Reif DM, Ritchie MD, Moore JH. Machine learning for detecting gene-gene interactions: a review. Applied Bioinformatics. 5: 77-88. PMID 16722772 DOI: 10.2165/00822942-200605020-00002  0.8
2006 Asselbergs FW, Moore JH, Berg MPvd, Rimm EB, Boer RAd, Dullaart RP, Navis G, Gilst WHv. A role for CETP TaqIB polymorphism in determining susceptibility to atrial fibrillation: a nested case control study Bmc Medical Genetics. 7: 39-39. PMID 16623947 DOI: 10.1186/1471-2350-7-39  0.48
2006 Thornton-Wells TA, Moore JH, Haines JL. Dissecting trait heterogeneity: a comparison of three clustering methods applied to genotypic data. Bmc Bioinformatics. 7: 204. PMID 16611359 DOI: 10.1186/1471-2105-7-204  1
2006 McKinney BA, Crowe JE, Voss HU, Crooke PS, Barney N, Moore JH. Hybrid grammar-based approach to nonlinear dynamical system identification from biological time series. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 73: 021912. PMID 16605367 DOI: 10.1103/Physreve.73.021912  0.56
2006 Reif DM, Moore JH. Visual analysis of statistical results from microarray studies of human breast cancer. Oncology Reports. 15: 1043-7. PMID 16525698  0.76
2006 Moore JH, Gilbert JC, Tsai CT, Chiang FT, Holden T, Barney N, White BC. A flexible computational framework for detecting, characterizing, and interpreting statistical patterns of epistasis in genetic studies of human disease susceptibility. Journal of Theoretical Biology. 241: 252-61. PMID 16457852 DOI: 10.1016/J.Jtbi.2005.11.036  1
2006 Sanada H, Yatabe J, Midorikawa S, Hashimoto S, Watanabe T, Moore JH, Ritchie MD, Williams SM, Pezzullo JC, Sasaki M, Eisner GM, Jose PA, Felder RA. Single-nucleotide polymorphisms for diagnosis of salt-sensitive hypertension. Clinical Chemistry. 52: 352-60. PMID 16439609 DOI: 10.1373/Clinchem.2005.059139  0.8
2006 Martin ER, Ritchie MD, Hahn L, Kang S, Moore JH. A novel method to identify gene-gene effects in nuclear families: The MDR-PDT Genetic Epidemiology. 30: 111-123. PMID 16374833 DOI: 10.1002/Gepi.20128  1
2006 Andrew AS, Nelson HH, Kelsey KT, Moore JH, Meng AC, Casella DP, Tosteson TD, Schned AR, Karagas MR. Concordance of multiple analytical approaches demonstrates a complex relationship between DNA repair gene SNPs, smoking and bladder cancer susceptibility. Carcinogenesis. 27: 1030-7. PMID 16311243 DOI: 10.1093/Carcin/Bgi284  1
2006 Asselbergs FW, Williams SM, Hebert PR, Coffey CS, Hillege HL, Navis G, Vaughan DE, Gilst WHv, Moore JH. The gender-specific role of polymorphisms from the fibrinolytic, renin-angiotensin, and bradykinin systems in determining plasma t-PA and PAI-1 levels. Thrombosis and Haemostasis. 96: 471-477. DOI: 10.1160/Th06-06-0335  0.76
2005 Wilke RA, Reif DM, Moore JH. Combinatorial pharmacogenetics. Nature Reviews. Drug Discovery. 4: 911-8. PMID 16264434 DOI: 10.1038/nrd1874  0.6
2005 Schwartz SA, Weil RJ, Thompson RC, Shyr Y, Moore JH, Toms SA, Johnson MD, Caprioli RM. Proteomic-based prognosis of brain tumor patients using direct-tissue matrix-assisted laser desorption ionization mass spectrometry. Cancer Research. 65: 7674-81. PMID 16140934 DOI: 10.1158/0008-5472.Can-04-3016  1
2005 Moore JH, Williams SM. Traversing the conceptual divide between biological and statistical epistasis: Systems biology and a more modern synthesis Bioessays. 27: 637-646. PMID 15892116 DOI: 10.1002/Bies.20236  1
2005 Fox RM, Von Stetina SE, Barlow SJ, Shaffer C, Olszewski KL, Moore JH, Dupuy D, Vidal M, Miller DM. A gene expression fingerprint of C. elegans embryonic motor neurons. Bmc Genomics. 6: 42. PMID 15780142 DOI: 10.1186/1471-2164-6-42  1
2005 Reif DM, Dudek SM, Shaffer CM, Wang J, Moore JH. Exploratory visual analysis of pharmacogenomic results. Pacific Symposium On Biocomputing. Pacific Symposium On Biocomputing. 296-307. PMID 15759635  1
2005 Moore JH, Boczko EM, Summar ML. Connecting the dots between genes, biochemistry, and disease susceptibility: systems biology modeling in human genetics. Molecular Genetics and Metabolism. 84: 104-11. PMID 15670716 DOI: 10.1016/J.Ymgme.2004.10.006  1
2005 Skaar DA, Shao Y, Haines JL, Stenger JE, Jaworski J, Martin ER, DeLong GR, Moore JH, McCauley JL, Sutcliffe JS, Ashley-Koch AE, Cuccaro ML, Folstein SE, Gilbert JR, Pericak-Vance MA. Analysis of the RELN gene as a genetic risk factor for autism. Molecular Psychiatry. 10: 563-71. PMID 15558079 DOI: 10.1038/Sj.Mp.4001614  1
2004 Moore JH, Hahn LW, Ritchie MD, Thornton TA, White BC. Routine Discovery of Complex Genetic Models using Genetic Algorithms. Applied Soft Computing. 4: 79-86. PMID 20948983 DOI: 10.1016/J.Asoc.2003.08.003  1
2004 Reif DM, White BC, Moore JH. Integrated analysis of genetic, genomic and proteomic data. Expert Review of Proteomics. 1: 67-75. PMID 15966800 DOI: 10.1586/14789450.1.1.67  1
2004 Thornton-Wells TA, Moore JH, Haines JL. Genetics, statistics and human disease: analytical retooling for complexity. Trends in Genetics : Tig. 20: 640-7. PMID 15522460 DOI: 10.1016/J.Tig.2004.09.007  1
2004 Olsen N, Sokka T, Seehorn CL, Kraft B, Maas K, Moore J, Aune TM. A gene expression signature for recent onset rheumatoid arthritis in peripheral blood mononuclear cells. Annals of the Rheumatic Diseases. 63: 1387-92. PMID 15479887 DOI: 10.1136/Ard.2003.017194  1
2004 Aune TM, Parker JS, Maas K, Liu Z, Olsen NJ, Moore JH. Co-localization of differentially expressed genes and shared susceptibility loci in human autoimmunity. Genetic Epidemiology. 27: 162-72. PMID 15305332 DOI: 10.1002/Gepi.20013  1
2004 Osipovich AB, White-Grindley EK, Hicks GG, Roshon MJ, Shaffer C, Moore JH, Ruley HE. Activation of cryptic 3' splice sites within introns of cellular genes following gene entrapment. Nucleic Acids Research. 32: 2912-24. PMID 15155860 DOI: 10.1093/Nar/Gkh604  1
2004 Olsen NJ, Moore JH, Aune TM. Gene expression signatures for autoimmune disease in peripheral blood mononuclear cells. Arthritis Research & Therapy. 6: 120-8. PMID 15142262 DOI: 10.1186/Ar1190  1
2004 Williams SM, Ritchie MD, Phillips JA, Dawson E, Prince M, Dzhura E, Willis A, Semenya A, Summar M, White BC, Addy JH, Kpodonu J, Wong LJ, Felder RA, Jose PA, ... Moore JH, et al. Multilocus analysis of hypertension: a hierarchical approach. Human Heredity. 57: 28-38. PMID 15133310 DOI: 10.1159/000077387  1
2004 Coffey CS, Hebert PR, Ritchie MD, Krumholz HM, Gaziano JM, Ridker PM, Brown NJ, Vaughan DE, Moore JH. An application of conditional logistic regression and multifactor dimensionality reduction for detecting gene-gene interactions on risk of myocardial infarction: the importance of model validation. Bmc Bioinformatics. 5: 49. PMID 15119966 DOI: 10.1186/1471-2105-5-49  0.8
2004 Smith MW, Patterson N, Lautenberger JA, Truelove AL, McDonald GJ, Waliszewska A, Kessing BD, Malasky MJ, Scafe C, Le E, De Jager PL, Mignault AA, Yi Z, De The G, Essex M, ... ... Moore JH, et al. A high-density admixture map for disease gene discovery in african americans. American Journal of Human Genetics. 74: 1001-13. PMID 15088270 DOI: 10.1086/420856  1
2004 Moore JH, Ritchie MD. STUDENTJAMA. The challenges of whole-genome approaches to common diseases. Jama. 291: 1642-3. PMID 15069055 DOI: 10.1001/Jama.291.13.1642  0.8
2004 Aune TM, Maas K, Parker J, Moore JH, Olsen NJ. Profiles of gene expression in human autoimmune disease. Cell Biochemistry and Biophysics. 40: 81-96. PMID 15054216 DOI: 10.1385/Cbb:40:2:081  1
2004 Tsai CT, Lai LP, Lin JL, Chiang FT, Hwang JJ, Ritchie MD, Moore JH, Hsu KL, Tseng CD, Liau CS, Tseng YZ. Renin-angiotensin system gene polymorphisms and atrial fibrillation. Circulation. 109: 1640-6. PMID 15023884 DOI: 10.1161/01.Cir.0000124487.36586.26  0.8
2004 Williams SM, Haines JL, Moore JH. The use of animal models in the study of complex disease: all else is never equal or why do so many human studies fail to replicate animal findings? Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology. 26: 170-9. PMID 14745835 DOI: 10.1002/Bies.10401  0.76
2004 Cho YM, Ritchie MD, Moore JH, Park JY, Lee KU, Shin HD, Lee HK, Park KS. Multifactor-dimensionality reduction shows a two-locus interaction associated with Type 2 diabetes mellitus Diabetologia. 47: 549-554. PMID 14730379 DOI: 10.1007/S00125-003-1321-3  1
2004 Moore JH, Hahn LW. An Improved Grammatical Evolution Strategy for Hierarchical Petri Net Modeling of Complex Genetic Systems Lecture Notes in Computer Science. 63-72. DOI: 10.1007/978-3-540-24653-4_7  0.68
2003 Moore JH, Thornton TA, Ritchie MD. Basic statistics. Current Protocols in Human Genetics / Editorial Board, Jonathan L. Haines ... [Et Al.]. Appendix 3M. PMID 18428338 DOI: 10.1002/0471142905.Hga03Ms37  1
2003 Moore JH, Hahn LW. Petri net modeling of high-order genetic systems using grammatical evolution. Biosystems. 72: 177-186. PMID 14642666 DOI: 10.1016/S0303-2647(03)00142-4  0.68
2003 Egan KM, Thompson PA, Titus-Ernstoff L, Moore JH, Ambrosone CB. MnSOD polymorphism and breast cancer in a population-based case-control study. Cancer Letters. 199: 27-33. PMID 12963120 DOI: 10.1016/S0304-3835(03)00349-5  1
2003 Yanagisawa K, Shyr Y, Xu BJ, Massion PP, Larsen PH, White BC, Roberts JR, Edgerton M, Gonzalez A, Nadaf S, Moore JH, Caprioli RM, Carbone DP. Proteomic patterns of tumour subsets in non-small-cell lung cancer. Lancet (London, England). 362: 433-9. PMID 12927430 DOI: 10.1016/S0140-6736(03)14068-8  1
2003 Aune TM, Maas K, Moore JH, Olsen NJ. Gene expression profiles in human autoimmune disease. Current Pharmaceutical Design. 9: 1905-17. PMID 12871194 DOI: 10.2174/1381612033454360  1
2003 Ritchie MD, White BC, Parker JS, Hahn LW, Moore JH. Optimization of neural network architecture using genetic programming improves detection and modeling of gene-gene interactions in studies of human diseases. Bmc Bioinformatics. 4: 28. PMID 12846935 DOI: 10.1186/1471-2105-4-28  1
2003 Hahn LW, Ritchie MD, Moore JH. Multifactor dimensionality reduction software for detecting gene-gene and gene-environment interactions. Bioinformatics (Oxford, England). 19: 376-82. PMID 12584123 DOI: 10.1093/Bioinformatics/Btf869  0.8
2003 Ritchie MD, Hahn LW, Moore JH. Power of multifactor dimensionality reduction for detecting gene-gene interactions in the presence of genotyping error, missing data, phenocopy, and genetic heterogeneity. Genetic Epidemiology. 24: 150-7. PMID 12548676 DOI: 10.1002/Gepi.10218  0.8
2003 Moore JH, Hahn LW. Evaluation of a discrete dynamic systems approach for modeling the hierarchical relationship between genes, biochemistry, and disease susceptibility Discrete and Continuous Dynamical Systems-Series B. 4: 275-287. DOI: 10.3934/Dcdsb.2004.4.275  0.68
2003 Tarumi T, Kravtsov DV, Moore JH, Williamsfk SM, Gailani D. Common single nucleotide polymorphisms in the promoter region of the human factor XI gene Journal of Thrombosis and Haemostasis. 1: 1854-1856. DOI: 10.1046/J.1538-7836.2003.00302.X  1
2002 Moore JH, Hahn LW, Ritchie MD, Thornton TA, White BC. Application of Genetic Algorithms to the Discovery of Complex Models for Simulation Studies in Human Genetics. Proceedings of the Genetic and Evolutionary Computation Conference / Gecco. Genetic and Evolutionary Computation Conference. 2002: 1150-1155. PMID 23413413  0.8
2002 Moore JH, Lamb JM, Brown NJ, Vaughan DE. A comparison of combinatorial partitioning and linear regression for the detection of epistatic effects of the ACE I/D and PAI-1 4G/5G polymorphisms on plasma PAI-1 levels. Clinical Genetics. 62: 74-9. PMID 12123491 DOI: 10.1034/J.1399-0004.2002.620110.X  1
2002 Moore JH, Smolkin ME, Lamb JM, Brown NJ, Vaughan DE. The relationship between plasma t-PA and PAI-1 levels is dependent on epistatic effects of the ACE I/D and PAI-1 4G/5G polymorphisms. Clinical Genetics. 62: 53-9. PMID 12123488 DOI: 10.1034/J.1399-0004.2002.620107.X  1
2002 Moore JH, Parker JS, Olsen NJ, Aune TM. Symbolic discriminant analysis of microarray data in autoimmune disease. Genetic Epidemiology. 23: 57-69. PMID 12112248 DOI: 10.1002/Gepi.1117  1
2002 Moore JH, Williams SM. New strategies for identifying gene-gene interactions in hypertension Annals of Medicine. 34: 88-95. PMID 12108579 DOI: 10.1080/07853890252953473  1
2002 Maas K, Chan S, Parker J, Slater A, Moore J, Olsen N, Aune TM. Cutting edge: molecular portrait of human autoimmune disease. Journal of Immunology (Baltimore, Md. : 1950). 169: 5-9. PMID 12077221 DOI: 10.4049/Jimmunol.169.1.5  1
2001 Ritchie MD, Hahn LW, Roodi N, Bailey LR, Dupont WD, Parl FF, Moore JH. Multifactor-dimensionality reduction reveals high-order interactions among estrogen-metabolism genes in sporadic breast cancer American Journal of Human Genetics. 69: 138-147. PMID 11404819 DOI: 10.1086/321276  1
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