Year |
Citation |
Score |
2018 |
Vologodskii A, Frank-Kamenetskii MD. Theoretical model, its parameters and predictions: Reply to comments on "DNA melting and energetics of the double helix". Physics of Life Reviews. PMID 29735359 DOI: 10.1016/J.Plrev.2018.04.003 |
0.578 |
|
2017 |
Vologodskii A, Frank-Kamenetskii MD. DNA melting and energetics of the double helix. Physics of Life Reviews. PMID 29170011 DOI: 10.1016/J.Plrev.2017.11.012 |
0.713 |
|
2016 |
Vologodskii A. Type II topoisomerases: Experimental studies, theoretical models, and logic: Reply to comments on "Disentangling DNA molecules". Physics of Life Reviews. PMID 27692401 DOI: 10.1016/J.Plrev.2016.09.006 |
0.549 |
|
2016 |
Vologodskii A. When Computer Simulation Excels Experiment. Biophysical Journal. 110: 2136-7. PMID 27224478 DOI: 10.1016/J.Bpj.2016.04.016 |
0.352 |
|
2016 |
Vologodskii A. Disentangling DNA molecules. Physics of Life Reviews. PMID 27173054 DOI: 10.1016/J.Plrev.2016.05.001 |
0.684 |
|
2015 |
Higgins NP, Vologodskii AV. Topological Behavior of Plasmid DNA. Microbiology Spectrum. 3. PMID 26104708 DOI: 10.1128/microbiolspec.PLAS-0036-2014 |
0.583 |
|
2015 |
Vologodskii A. Biophysics of DNA Biophysics of Dna. 1-270. DOI: 10.1017/CBO9781139542371 |
0.572 |
|
2013 |
Vologodskii A, Frank-Kamenetskii MD. Strong bending of the DNA double helix. Nucleic Acids Research. 41: 6785-92. PMID 23677618 DOI: 10.1093/Nar/Gkt396 |
0.72 |
|
2013 |
Vologodskii A, Du Q, Frank-Kamenetskii MD. Bending of short DNA helices. Artificial Dna, Pna & Xna. 4: 1-3. PMID 23406786 DOI: 10.4161/adna.23892 |
0.62 |
|
2012 |
Vologodskii A. Bridged DNA circles: A new model system to study DNA topology Macromolecules. 45: 4333-4336. DOI: 10.1021/Ma300520X |
0.684 |
|
2011 |
Vologodskii A. Unlinking of supercoiled DNA catenanes by type IIA topoisomerases. Biophysical Journal. 101: 1403-11. PMID 21943421 DOI: 10.1016/J.Bpj.2011.08.011 |
0.689 |
|
2011 |
Geggier S, Kotlyar A, Vologodskii A. Temperature dependence of DNA persistence length. Nucleic Acids Research. 39: 1419-26. PMID 20952402 DOI: 10.1093/Nar/Gkq932 |
0.727 |
|
2011 |
Geggier S, Vologodskii A. Sequence Dependence of DNA Persistence Length Biophysical Journal. 100: 76a. DOI: 10.1016/J.Bpj.2010.12.622 |
0.759 |
|
2010 |
Geggier S, Vologodskii A. Sequence dependence of DNA bending rigidity. Proceedings of the National Academy of Sciences of the United States of America. 107: 15421-6. PMID 20702767 DOI: 10.1073/Pnas.1004809107 |
0.757 |
|
2010 |
Vologodskii A. DNA-ligand binding and the force-extension experiments. Comment on "Biophysical characterization of DNA binding from single molecule force measurements" by Chaurasiya et al. Physics of Life Reviews. 7: 346-7; discussion 35. PMID 20621571 DOI: 10.1016/J.Plrev.2010.06.008 |
0.509 |
|
2010 |
Vologodskii A. DNA supercoiling helps to unlink sister duplexes after replication. Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology. 32: 9-12. PMID 20020501 DOI: 10.1002/Bies.200900143 |
0.694 |
|
2009 |
Vologodskii A, Rybenkov VV. Simulation of DNA catenanes. Physical Chemistry Chemical Physics : Pccp. 11: 10543-52. PMID 20145800 DOI: 10.1039/B910812B |
0.647 |
|
2009 |
Vologodskii A. Determining protein-induced DNA bending in force-extension experiments: theoretical analysis. Biophysical Journal. 96: 3591-9. PMID 19413964 DOI: 10.1016/J.Bpj.2009.02.022 |
0.679 |
|
2009 |
Vologodskii A. Theoretical models of DNA topology simplification by type IIA DNA topoisomerases. Nucleic Acids Research. 37: 3125-33. PMID 19383879 DOI: 10.1093/Nar/Gkp250 |
0.638 |
|
2009 |
Zheng X, Vologodskii A. Theoretical analysis of disruptions in DNA minicircles. Biophysical Journal. 96: 1341-9. PMID 19217852 DOI: 10.1016/J.Bpj.2008.11.013 |
0.646 |
|
2009 |
Vologodskii A, Du Q, Zheng X, Kotlyar A. Disruptions of the Regular Structure in DNA Minicircles Biophysical Journal. 96: 577a. DOI: 10.1016/J.Bpj.2008.12.3014 |
0.691 |
|
2008 |
Du Q, Kotlyar A, Vologodskii A. Kinking the double helix by bending deformation. Nucleic Acids Research. 36: 1120-8. PMID 18096619 DOI: 10.1093/Nar/Gkm1125 |
0.635 |
|
2007 |
Polikanov YS, Bondarenko VA, Tchernaenko V, Jiang YI, Lutter LC, Vologodskii A, Studitsky VM. Probability of the site juxtaposition determines the rate of protein-mediated DNA looping. Biophysical Journal. 93: 2726-31. PMID 17573434 DOI: 10.1529/Biophysj.107.111245 |
0.661 |
|
2007 |
Du Q, Livshits A, Kwiatek A, Jayaram M, Vologodskii A. Protein-induced local DNA bends regulate global topology of recombination products. Journal of Molecular Biology. 368: 170-82. PMID 17337001 DOI: 10.1016/J.Jmb.2007.02.010 |
0.604 |
|
2006 |
Vologodskii A. Brownian dynamics simulation of knot diffusion along a stretched DNA molecule. Biophysical Journal. 90: 1594-7. PMID 16361333 DOI: 10.1529/Biophysj.105.074682 |
0.603 |
|
2006 |
Vologodskii A. Simulation of equilibrium and dynamic properties of large DNA molecules Computational Studies of Rna and Dna. 579-604. DOI: 10.1007/978-1-4020-4851-3_23 |
0.519 |
|
2005 |
Du Q, Smith C, Shiffeldrim N, Vologodskaia M, Vologodskii A. Cyclization of short DNA fragments and bending fluctuations of the double helix. Proceedings of the National Academy of Sciences of the United States of America. 102: 5397-402. PMID 15809441 DOI: 10.1073/Pnas.0500983102 |
0.764 |
|
2005 |
Du Q, Vologodskaia M, Kuhn H, Frank-Kamenetskii M, Vologodskii A. Gapped DNA and cyclization of short DNA fragments. Biophysical Journal. 88: 4137-45. PMID 15778443 DOI: 10.1529/Biophysj.104.055657 |
0.754 |
|
2005 |
Charvin G, Vologodskii A, Bensimon D, Croquette V. Braiding DNA: Experiments, simulations, and models Biophysical Journal. 88: 4124-4136. PMID 15778439 DOI: 10.1529/Biophysj.104.056945 |
0.675 |
|
2004 |
Vologodskii A. Computational analysis of DNA gyrase action. Biophysical Journal. 87: 3066-73. PMID 15339812 DOI: 10.1529/Biophysj.104.042994 |
0.594 |
|
2004 |
Embleton ML, Vologodskii AV, Halford SE. Dynamics of DNA loop capture by the SfiI restriction endonuclease on supercoiled and relaxed DNA. Journal of Molecular Biology. 339: 53-66. PMID 15123420 DOI: 10.1016/J.Jmb.2004.03.046 |
0.536 |
|
2003 |
Stone MD, Bryant Z, Crisona NJ, Smith SB, Vologodskii A, Bustamante C, Cozzarelli NR. Chirality sensing by Escherichia coli topoisomerase IV and the mechanism of type II topoisomerases. Proceedings of the National Academy of Sciences of the United States of America. 100: 8654-9. PMID 12857958 DOI: 10.1073/Pnas.1133178100 |
0.622 |
|
2003 |
Sa-Ardyen P, Vologodskii AV, Seeman NC. The flexibility of DNA double crossover molecules. Biophysical Journal. 84: 3829-37. PMID 12770888 DOI: 10.1016/S0006-3495(03)75110-8 |
0.536 |
|
2002 |
Grainge I, Pathania S, Vologodskii A, Harshey RM, Jayaram M. Symmetric DNA sites are functionally asymmetric within Flp and Cre site-specific DNA recombination synapses. Journal of Molecular Biology. 320: 515-27. PMID 12096907 DOI: 10.1016/S0022-2836(02)00517-X |
0.53 |
|
2002 |
Klenin K, Langowski J, Vologodskii A. Computational analysis of the chiral action of type II DNA topoisomerases. Journal of Molecular Biology. 320: 359-67. PMID 12079392 DOI: 10.1016/S0022-2836(02)00447-3 |
0.568 |
|
2002 |
Vologodskaia M, Vologodskii A. Contribution of the intrinsic curvature to measured DNA persistence length. Journal of Molecular Biology. 317: 205-13. PMID 11902837 DOI: 10.1006/Jmbi.2001.5366 |
0.757 |
|
2001 |
Vologodskii AV. Distributions of topological states in circular DNA Molekulyarnaya Biologiya. 35: 285-297. PMID 11357411 DOI: 10.1023/A:1010443602438 |
0.458 |
|
2001 |
Vologodskii AV, Zhang W, Rybenkov VV, Podtelezhnikov AA, Subramanian D, Griffith JD, Cozzarelli NR. Mechanism of topology simplification by type II DNA topoisomerases. Proceedings of the National Academy of Sciences of the United States of America. 98: 3045-9. PMID 11248029 DOI: 10.1073/Pnas.061029098 |
0.646 |
|
2001 |
Huang J, Schlick T, Vologodskii A. Dynamics of site juxtaposition in supercoiled DNA Proceedings of the National Academy of Sciences of the United States of America. 98: 968-973. PMID 11158579 DOI: 10.1073/Pnas.98.3.968 |
0.639 |
|
2001 |
Postow L, Ullsperger C, Keller RW, Bustamante C, Vologodskii AV, Cozzarelli NR. Positive torsional strain causes the formation of a four-way junction at replication forks. The Journal of Biological Chemistry. 276: 2790-6. PMID 11056156 DOI: 10.1074/Jbc.M006736200 |
0.441 |
|
2000 |
Podtelezhnikov AA, Mao C, Seeman NC, Vologodskii A. Multimerization-cyclization of DNA fragments as a method of conformational analysis. Biophysical Journal. 79: 2692-704. PMID 11053141 DOI: 10.1016/S0006-3495(00)76507-6 |
0.639 |
|
2000 |
Reynaldo LP, Vologodskii AV, Neri BP, Lyamichev VI. The kinetics of oligonucleotide replacements Journal of Molecular Biology. 297: 511-520. PMID 10715217 DOI: 10.1006/jmbi.2000.3573 |
0.387 |
|
2000 |
Podtelezhnikov AA, Vologodskii AV. Dynamics of small loops in DNA molecules Macromolecules. 33: 2767-2771. DOI: 10.1021/Ma991781V |
0.537 |
|
1999 |
Alexandrov AI, Cozzarelli NR, Holmes VF, Khodursky AB, Peter BJ, Postow L, Rybenkov V, Vologodskii AV. Mechanisms of separation of the complementary strands of DNA during replication. Genetica. 106: 131-40. PMID 10710719 DOI: 10.1023/A:1003749416449 |
0.589 |
|
1999 |
Krasilnikov AS, Podtelezhnikov A, Vologodskii A, Mirkin SM. Large-scale effects of transcriptional DNA supercoiling in vivo Journal of Molecular Biology. 292: 1149-1160. PMID 10512709 DOI: 10.1006/Jmbi.1999.3117 |
0.617 |
|
1999 |
Vologodskaia MY, Vologodskii AV. Effect of magnesium on cruciform extrusion in supercoiled DNA Journal of Molecular Biology. 289: 851-859. PMID 10369766 DOI: 10.1006/jmbi.1999.2811 |
0.362 |
|
1998 |
Jian H, Schlick T, Vologodskii A. Internal motion of supercoiled DNA: Brownian dynamics simulations of site juxtaposition Journal of Molecular Biology. 284: 287-296. PMID 9813118 DOI: 10.1006/Jmbi.1998.2170 |
0.661 |
|
1998 |
Vologodskii AV, Crisona NJ, Laurie B, Pieranski P, Katritch V, Dubochet J, Stasiak A. Sedimentation and electrophoretic migration of DNA knots and catenanes. Journal of Molecular Biology. 278: 1-3. PMID 9571029 DOI: 10.1006/Jmbi.1998.1696 |
0.532 |
|
1998 |
Vologodskii A. Exploiting circular DNA Proceedings of the National Academy of Sciences of the United States of America. 95: 4092-4093. PMID 9539694 DOI: 10.1073/Pnas.95.8.4092 |
0.662 |
|
1998 |
Vologodskii AV, Yang X, Seeman NC. Non-complementary DNA helical structure induced by positive torsional stress. Nucleic Acids Research. 26: 1503-8. PMID 9490798 DOI: 10.1093/Nar/26.6.1503 |
0.335 |
|
1998 |
Yang X, Vologodskii AV, Liu B, Kemper B, Seeman NC. Torsional control of double-stranded DNA branch migration. Biopolymers. 45: 69-83. PMID 9433186 DOI: 10.1002/(Sici)1097-0282(199801)45:1<69::Aid-Bip6>3.0.Co;2-X |
0.447 |
|
1997 |
Rybenkov VV, Ullsperger C, Vologodskii AV, Cozzarelli NR. Simplification of DNA topology below equilibrium values by type II topoisomerases. Science (New York, N.Y.). 277: 690-3. PMID 9235892 DOI: 10.1126/Science.277.5326.690 |
0.597 |
|
1997 |
Vologodskii AV, Marko JF. Extension of torsionally stressed DNA by external force Biophysical Journal. 73: 123-132. PMID 9199777 DOI: 10.1016/S0006-3495(97)78053-6 |
0.466 |
|
1997 |
Katritch V, Vologodskii A. The effect of intrinsic curvature on conformational properties of circular DNA Biophysical Journal. 72: 1070-1079. PMID 9138556 DOI: 10.1016/S0006-3495(97)78757-5 |
0.748 |
|
1997 |
Rybenkov VV, Vologodskii AV, Cozzarelli NR. The effect of ionic conditions on the conformations of supercoiled DNA. II. Equilibrium catenation. Journal of Molecular Biology. 267: 312-23. PMID 9096228 DOI: 10.1006/Jmbi.1996.0877 |
0.674 |
|
1997 |
Rybenkov VV, Vologodskii AV, Cozzarelli NR. The effect of ionic conditions on the conformations of supercoiled DNA. I. Sedimentation analysis. Journal of Molecular Biology. 267: 299-311. PMID 9096227 DOI: 10.1006/Jmbi.1996.0876 |
0.629 |
|
1997 |
Rybenkov VV, Vologodskii AV, Cozzarelli NR. The effect of ionic conditions on DNA helical repeat, effective diameter and free energy of supercoiling. Nucleic Acids Research. 25: 1412-8. PMID 9060437 DOI: 10.1093/Nar/25.7.1412 |
0.583 |
|
1997 |
Jian H, Vologodskii AV, Schlick T. A combined wormlike-chain and bead model for dynamic simulations of long linear DNA Journal of Computational Physics. 136: 168-179. DOI: 10.1006/Jcph.1997.5765 |
0.537 |
|
1996 |
Vologodskii A, Cozzarelli NR. Effect of supercoiling on the juxtaposition and relative orientation of DNA sites. Biophysical Journal. 70: 2548-56. PMID 8744294 DOI: 10.1016/S0006-3495(96)79826-0 |
0.661 |
|
1996 |
Katrich VI, Vologodskii AV. Conformational features of circular DNA with natural curvature Biofizika. 41: 536-538. PMID 8723675 |
0.644 |
|
1996 |
Katritch VY, Vologodskii AV. Conformational analysis of circular DNA with intrinsic curvature Biofizika. 41: 538. |
0.672 |
|
1995 |
Vologodskii A, Cozzarelli N. Modeling of long-range electrostatic interactions in DNA Biopolymers. 35: 289-296. PMID 7703374 DOI: 10.1002/Bip.360350304 |
0.613 |
|
1994 |
Vologodskii AV, Cozzarelli NR. Conformational and thermodynamic properties of supercoiled DNA. Annual Review of Biophysics and Biomolecular Structure. 23: 609-43. PMID 7919794 DOI: 10.1146/Annurev.Bb.23.060194.003141 |
0.65 |
|
1994 |
Podtelezhnikov AA, Kurakin AV, Vologodskii AV, Cherny DI. Testing the quality of electron microscope mapping data for DNA molecules with sequence-specific ligands Micron. 25: 439-446. PMID 7850350 DOI: 10.1016/0968-4328(94)00033-6 |
0.482 |
|
1994 |
Vologodskii AV, Cozzarelli NR. Supercoiling, knotting, looping and other large-scale conformational properties of DNA Current Opinion in Structural Biology. 4: 372-375. DOI: 10.1016/S0959-440X(94)90105-8 |
0.617 |
|
1994 |
Langowski J, Kapp U, Klenin K, Vologodskii A. Solution structure and dynamics of DNA topoisomers: Dynamic light scattering studies and Monte Carlo simulations Biopolymers. 34: 639-646. DOI: 10.1002/Bip.360340506 |
0.58 |
|
1994 |
Vologodskii A. DNA extension under the action of an external force Macromolecules. 27: 5623-5625. |
0.49 |
|
1993 |
Rybenkov VV, Cozzarelli NR, Vologodskii AV. Probability of DNA knotting and the effective diameter of the DNA double helix. Proceedings of the National Academy of Sciences of the United States of America. 90: 5307-11. PMID 8506378 DOI: 10.1073/Pnas.90.11.5307 |
0.616 |
|
1993 |
Vologodskii AV, Cozzarelli NR. Monte Carlo analysis of the conformation of DNA catenanes. Journal of Molecular Biology. 232: 1130-40. PMID 8371271 DOI: 10.1006/Jmbi.1993.1465 |
0.537 |
|
1992 |
Vologodskii AV, Levene SD, Klenin KV, Frank-Kamenetskii M, Cozzarelli NR. Conformational and thermodynamic properties of supercoiled DNA. Journal of Molecular Biology. 227: 1224-43. PMID 1433295 DOI: 10.1016/0022-2836(92)90533-P |
0.647 |
|
1992 |
Vologodskii AV, Frank-Kamenetskii MD. Modeling supercoiled DNA Methods in Enzymology. 211: 467-480. PMID 1406321 DOI: 10.1016/0076-6879(92)11025-E |
0.534 |
|
1991 |
Klenin KV, Vologodskii AV, Anshelevich VV, Dykhne AM, Frank-Kamenetskii MD. Computer simulation of DNA supercoiling Journal of Molecular Biology. 217: 413-419. PMID 1994032 DOI: 10.1016/0022-2836(91)90745-R |
0.575 |
|
1990 |
Anshelevich VV, Vologodskii AV. The effect of sequence heterogeneity on DNA melting kinetics. Journal of Biomolecular Structure & Dynamics. 4: 251-62. PMID 3271443 DOI: 10.1080/07391102.1986.10506344 |
0.443 |
|
1989 |
Klenin KV, Vologodskii AV, Anshelevich VV, Klishko VY, Dykhne AM, Frank-Kamenetskii MD. Variance of writhe for wormlike dna rings with excluded volume Journal of Biomolecular Structure and Dynamics. 6: 707-714. PMID 2619935 DOI: 10.1080/07391102.1989.10507731 |
0.609 |
|
1988 |
Perelroyzen MP, Vologodskii AV. Theoretical analysis of 'addressed' chemical modification of DNA Nucleic Acids Research. 16: 4693-4704. PMID 3380694 DOI: 10.1093/nar/16.10.4693 |
0.587 |
|
1988 |
Klenin KV, Vologodskii AV, Anshelevich VV, Dykhne AM, Frank-Kamenetskii MD. Effect of excluded volume on topological properties of circular dna Journal of Biomolecular Structure and Dynamics. 5: 1173-1185. PMID 3271506 DOI: 10.1080/07391102.1988.10506462 |
0.438 |
|
1988 |
Anshelevich VV, Vologodskii AV, Frank-Kamenetskii MD. A theoretical study of formation of DNA noncanonical structures under negative superhelical stress Journal of Biomolecular Structure &Amp; Dynamics. 6: 247-259. PMID 2856035 DOI: 10.1080/07391102.1988.10507711 |
0.638 |
|
1988 |
Perelroyzen MP, Vologodskii AV. Theoretical analysis of addressed modification of DNA Biopolymers and Cell. 4: 283-289. DOI: 10.7124/bc.00023A |
0.642 |
|
1988 |
Klenin KV, Vologodskii AV, Anshelevich VV, Dykhne AM, Frank-Kamenetskii MD. Topological characteristics of circular DNA: excluded volume effects Biopolymers and Cell. 4: 85-90. DOI: 10.7124/Bc.000216 |
0.586 |
|
1987 |
Mirkin SM, Lyamichev VI, Kumarev VP, Kobzev VF, Nosikov VV, Vologodskii AV. The energetics of the b-z transition in dna Journal of Biomolecular Structure and Dynamics. 5: 079-088. PMID 3271469 DOI: 10.1080/07391102.1987.10506376 |
0.42 |
|
1987 |
Mirkin SM, Lyamichev VI, Kumarev VP, Kobzev VF, Nosikov VV, Vologodskii AV. B—Z transition in DNA with an arbitrary base-pair sequence Biopolymers and Cell. 3: 227-234. DOI: 10.7124/bc.0001F4 |
0.565 |
|
1987 |
Anshelevich VV, Vologodskii AV. Effect of nucleotide sequence on kinetics of DNA melting Biopolymers and Cell. 3: 66-71. DOI: 10.7124/bc.0001D6 |
0.589 |
|
1986 |
Pakhomov DV, Vologodskii AV. A theoretical study of the B-A transition in superhelical DNA Biopolymers and Cell. 2: 240-245. DOI: 10.7124/bc.0001BC |
0.474 |
|
1985 |
Vologodskii AV. Formation of noncanonical structures in superhelical DNA. Effects of mutual influence of transitions Molekulyarnaya Biologiya. 19: 687-692. PMID 4033641 |
0.462 |
|
1985 |
Frank-Kamenetskii MD, Lukashin AV, Anshelevich VV, Vologodskii AV. Torsional and bending rigidity of the double helix from data on small dna rings Journal of Biomolecular Structure and Dynamics. 2: 1005-1012. PMID 3916932 DOI: 10.1080/07391102.1985.10507616 |
0.444 |
|
1984 |
Frank-Kamenetskii MD, Vologodskii AV. Thermodynamics of the B-Z transition in superhelical DNA Nature. 307: 481-482. PMID 6694740 DOI: 10.1038/307481A0 |
0.484 |
|
1984 |
Vologodskii AV, Amirikyan BR, Lyubchenko YL, Frank- Kamenetskii MD. Allowance for heterogeneous stacking in the DNA helix-coil transition theory Journal of Biomolecular Structure and Dynamics. 2: 131-148. PMID 6400927 DOI: 10.1080/07391102.1984.10507552 |
0.507 |
|
1984 |
Vologodskii AV, Frank-Kamenetskii MD. Left-handed z form in superhelical dna: A theoretical study Journal of Biomolecular Structure and Dynamics. 1: 1325-1334. PMID 6400823 DOI: 10.1080/07391102.1984.10507523 |
0.353 |
|
1983 |
Vologodskii AV, Frank-Kamenetskii MD. The relaxation time for a cruciform structure in superhelical DNA Febs Letters. 160: 173-176. PMID 6884508 DOI: 10.1016/0014-5793(83)80960-0 |
0.446 |
|
1982 |
Vologodskii AV, Frank-Kamenetskii MD. Theoretical study of cruciform states in superhelical DNAs Febs Letters. 143: 257-260. PMID 7117531 DOI: 10.1016/0014-5793(82)80111-7 |
0.556 |
|
1981 |
Perelroyzen MP, Lyamichev VI, Kalambet YA, Lyubchenko YL, Vologodskii AV. A study of the reversibility of helix-coil transition in DNA Nucleic Acids Research. 9: 4043-4059. PMID 7301577 DOI: 10.1093/nar/9.16.4043 |
0.63 |
|
1981 |
Vologodskii AV, Frank-Kamenetskii MD. Premelting of superhelical DNA: an expression for superhelical energy Febs Letters. 131: 178-180. PMID 7286239 DOI: 10.1016/0014-5793(81)80914-3 |
0.463 |
|
1981 |
Amirikyan BR, Vologodskii AV, Lyubchenko YL. Determination of DNA cooperativity factor Nucleic Acids Research. 9: 5469-5482. PMID 7029470 DOI: 10.1093/nar/9.20.5469 |
0.653 |
|
1981 |
Frank-Kamenetskii MD, Vologodskii AV. Topological Aspects Of The Physics Of Polymers: The Theory And Its Biophysical Applications Soviet Physics - Uspekhi. 24: 679-696. DOI: 10.1070/PU1981v024n08ABEH004835 |
0.455 |
|
1979 |
Vologodskii AV, Anshelevich VV, Lukashin AV, Frank-Kamenetskii MD. Statistical mechanics of supercoils and the torsional stiffness of the DNA double helix Nature. 280: 294-298. PMID 460401 DOI: 10.1038/280294A0 |
0.548 |
|
1979 |
Anshelevich VV, Vologodskii AV, Lukashin AV, Frank-Kamenetskii MD. Statistical-mechanical treatment of violations of the double helix in supercoiled DNA Biopolymers - Peptide Science Section. 18: 2733-2744. PMID 159735 |
0.55 |
|
1979 |
Vologodskii AV, Lukashin AV, Anshelevich VV, Frank-Kamenetskii MD. Fluctuations in superhelical DNA Nucleic Acids Research. 6: 967-982. PMID 155809 DOI: 10.1093/Nar/6.3.967 |
0.602 |
|
1978 |
Vologodskii AV, Frank-Kamenetskii MD. Theoretical melting profiles and denaturation maps of DNA with known sequence: Fd DNA Nucleic Acids Research. 5: 2547-2556. PMID 673860 DOI: 10.1093/nar/5.7.2547 |
0.556 |
|
1978 |
Lyubchenko YL, Vologodskii AV, Frank-Kamenetskii MD. Direct comparison of theoretical and experimental melting profiles for RFII ΦX174 DNA Nature. 271: 28-31. PMID 625323 DOI: 10.1038/271028A0 |
0.568 |
|
1978 |
Karataev GI, Permogorov VI, Vologodskii AV, Frank-Kamenetskii MD. Denaturation maps of DNA: Experimental and theoretical maps of ø×174 DNA Nucleic Acids Research. 5: 2493-2500. PMID 566910 DOI: 10.1093/Nar/5.7.2493 |
0.481 |
|
1977 |
Frank-Kamenetskii MD, Vologodskii AV. The nature of the fine structure of DNA melting curves Nature. 269: 729-730. PMID 593338 DOI: 10.1038/269729a0 |
0.545 |
|
1976 |
Lyubchenko YL, Frank-Kamenetskii AV, Vologodskii AV, Lazurkin YS, Gause GG. Fine structure of DNA melting curves Biopolymers. 15: 1019-1036. PMID 1268312 DOI: 10.1002/bip.1976.360150602 |
0.559 |
|
1976 |
Belintsev BN, Vologodskii AV, Frank-Kamenetskii MD. Influence of base sequence on the stability of the double helix of DNA Molekulyarnaya Biologiya. 10: 629-633. PMID 1023045 |
0.57 |
|
1976 |
Lukashin AV, Vologodskii AV, Frank-Kamenetskii MD, Lyubchenko YL. Fluctuational opening of the double helix as revealed by theoretical and experimental study of DNA interaction with formaldehyde Journal of Molecular Biology. 108: 665-682. PMID 1018321 DOI: 10.1016/S0022-2836(76)80111-8 |
0.594 |
|
1976 |
Vologodskii A, Anshelevich V. On the Character of the Thermodynamic Properties Distribution in Dna Molecules Inside the Melting Interval Nucleic Acids Research. 3: 3377-3382. PMID 1005123 DOI: 10.1093/Nar/3.12.3377 |
0.612 |
|
1976 |
Lukashin AV, Vologodskii AV, Frank Kamenetskii MD. Comparison of different theoretical descriptions of helix coil transition in DNA Biopolymers. 15: 1841-1844. PMID 963263 |
0.557 |
|
1975 |
Vologodskii AV, Frank-Kamenetskii MD. Theoretical study of DNA unwinding under the action of formaldehyde Journal of Theoretical Biology. 55: 153-166. PMID 1207155 DOI: 10.1016/S0022-5193(75)80114-7 |
0.511 |
|
1974 |
Vologodskii AV, Frank-Kamenetskii MD, Lukashin AV. Theory of co-operative formation of defects in DNA molecule under ultraviolet irradiation Journal of Theoretical Biology. 44: 271-286. PMID 4829235 DOI: 10.1016/0022-5193(74)90160-X |
0.395 |
|
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