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Maximillian Haeussler, PhD - Publications

Affiliations: 
Faculty of Life Sciences University of Manchester, Manchester, England, United Kingdom 
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20 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2016 Haeussler M, Schönig K, Eckert H, Eschstruth A, Mianné J, Renaud JB, Schneider-Maunoury S, Shkumatava A, Teboul L, Kent J, Joly JS, Concordet JP. Evaluation of off-target and on-target scoring algorithms and integration into the guide RNA selection tool CRISPOR. Genome Biology. 17: 148. PMID 27380939 DOI: 10.1186/s13059-016-1012-2  0.76
2016 Ponomarenko J, Vaughan K, Paul S, Peters B, Sette A, Haeussler M, Maurer-Stroh S. Ebola: An analysis of immunity at the molecular level International Workshop On Artificial Immune Systems, Ais 2015/Icsi3 2015 - Systems Immunology, Immunoinformatics and Immune-Computation: Immunology Without Borders, Proceedings. DOI: 10.1109/AISW.2015.7469230  0.76
2015 Speir ML, Zweig AS, Rosenbloom KR, Raney BJ, Paten B, Nejad P, Lee BT, Learned K, Karolchik D, Hinrichs AS, Heitner S, Harte RA, Haeussler M, Guruvadoo L, Fujita PA, et al. The UCSC Genome Browser database: 2016 update. Nucleic Acids Research. PMID 26590259 DOI: 10.1093/nar/gkv1275  0.76
2015 Rosenbloom KR, Armstrong J, Barber GP, Casper J, Clawson H, Diekhans M, Dreszer TR, Fujita PA, Guruvadoo L, Haeussler M, Harte RA, Heitner S, Hickey G, Hinrichs AS, Hubley R, et al. The UCSC Genome Browser database: 2015 update. Nucleic Acids Research. 43: D670-81. PMID 25428374 DOI: 10.1093/nar/gku1177  0.76
2015 Haeussler M, Raney BJ, Hinrichs AS, Clawson H, Zweig AS, Karolchik D, Casper J, Speir ML, Haussler D, Kent WJ. Navigating protected genomics data with UCSC Genome Browser in a Box. Bioinformatics (Oxford, England). 31: 764-6. PMID 25348212 DOI: 10.1093/bioinformatics/btu712  0.76
2015 Mateo JL, van den Berg DL, Haeussler M, Drechsel D, Gaber ZB, Castro DS, Robson P, Crawford GE, Flicek P, Ettwiller L, Wittbrodt J, Guillemot F, Martynoga B. Characterization of the neural stem cell gene regulatory network identifies OLIG2 as a multifunctional regulator of self-renewal. Genome Research. 25: 41-56. PMID 25294244 DOI: 10.1101/gr.173435.114  0.76
2014 Jacobs FM, Greenberg D, Nguyen N, Haeussler M, Ewing AD, Katzman S, Paten B, Salama SR, Haussler D. An evolutionary arms race between KRAB zinc-finger genes ZNF91/93 and SVA/L1 retrotransposons. Nature. 516: 242-5. PMID 25274305 DOI: 10.1038/nature13760  0.76
2014 Karolchik D, Barber GP, Casper J, Clawson H, Cline MS, Diekhans M, Dreszer TR, Fujita PA, Guruvadoo L, Haeussler M, Harte RA, Heitner S, Hinrichs AS, Learned K, Lee BT, et al. The UCSC Genome Browser database: 2014 update. Nucleic Acids Research. 42: D764-70. PMID 24270787 DOI: 10.1093/nar/gkt1168  0.76
2013 Meyer LR, Zweig AS, Hinrichs AS, Karolchik D, Kuhn RM, Wong M, Sloan CA, Rosenbloom KR, Roe G, Rhead B, Raney BJ, Pohl A, Malladi VS, Li CH, Lee BT, ... ... Haeussler M, et al. The UCSC Genome Browser database: extensions and updates 2013. Nucleic Acids Research. 41: D64-9. PMID 23155063 DOI: 10.1093/nar/gks1048  0.76
2012 Woznica A, Haeussler M, Starobinska E, Jemmett J, Li Y, Mount D, Davidson B. Initial deployment of the cardiogenic gene regulatory network in the basal chordate, Ciona intestinalis. Developmental Biology. 368: 127-39. PMID 22595514 DOI: 10.1016/j.ydbio.2012.05.002  0.76
2011 Baran J, Gerner M, Haeussler M, Nenadic G, Bergman CM. pubmed2ensembl: a resource for mining the biological literature on genes. Plos One. 6: e24716. PMID 21980353 DOI: 10.1371/journal.pone.0024716  0.76
2011 Hakenberg J, Gerner M, Haeussler M, Solt I, Plake C, Schroeder M, Gonzalez G, Nenadic G, Bergman CM. The GNAT library for local and remote gene mention normalization. Bioinformatics (Oxford, England). 27: 2769-71. PMID 21813477 DOI: 10.1093/bioinformatics/btr455  0.76
2011 Haeussler M, Gerner M, Bergman CM. Annotating genes and genomes with DNA sequences extracted from biomedical articles. Bioinformatics (Oxford, England). 27: 980-6. PMID 21325301 DOI: 10.1093/bioinformatics/btr043  0.76
2011 Haeussler M, Joly JS. When needles look like hay: how to find tissue-specific enhancers in model organism genomes. Developmental Biology. 350: 239-54. PMID 21130761 DOI: 10.1016/j.ydbio.2010.11.026  0.76
2010 Haeussler M, Jaszczyszyn Y, Christiaen L, Joly JS. A cis-regulatory signature for chordate anterior neuroectodermal genes. Plos Genetics. 6: e1000912. PMID 20419150 DOI: 10.1371/journal.pgen.1000912  0.76
2009 Auger H, Lamy C, Haeussler M, Khoueiry P, Lemaire P, Joly JS. Similar regulatory logic in Ciona intestinalis for two Wnt pathway modulators, ROR and SFRP-1/5. Developmental Biology. 329: 364-73. PMID 19248777 DOI: 10.1016/j.ydbio.2009.02.018  0.76
2009 Haeussler M. Mail Scientist. 23.  0.76
2008 Aerts S, Haeussler M, van Vooren S, Griffith OL, Hulpiau P, Jones SJ, Montgomery SB, Bergman CM. Text-mining assisted regulatory annotation. Genome Biology. 9: R31. PMID 18271954 DOI: 10.1186/gb-2008-9-2-r31  0.76
2008 Griffith OL, Montgomery SB, Bernier B, Chu B, Kasaian K, Aerts S, Mahony S, Sleumer MC, Bilenky M, Haeussler M, Griffith M, Gallo SM, Giardine B, Hooghe B, Van Loo P, et al. ORegAnno: an open-access community-driven resource for regulatory annotation. Nucleic Acids Research. 36: D107-13. PMID 18006570 DOI: 10.1093/nar/gkm967  0.76
2007 Jaszczyszyn Y, Haeussler M, Heuzé A, Debiais-Thibaud M, Casane D, Bourrat F, Joly JS. Comparison of the expression of medaka (Oryzias latipes) pitx genes with other vertebrates shows high conservation and a case of functional shuffling in the pituitary. Gene. 406: 42-50. PMID 17656043 DOI: 10.1016/j.gene.2007.05.024  0.76
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