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Pauline C. Ng, Ph.D. - Publications

Affiliations: 
2002 University of Washington, Seattle, Seattle, WA 
Area:
Biomedical Engineering
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17 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Ko TK, Javed A, Lee KL, Pathiraja TN, Liu X, Malik S, Soh SX, Heng XT, Takahashi N, Tan JHJ, Bhatia R, Khng AJ, Chng WJ, Sia YY, Fruman DA, ... ... Ng PC, et al. An integrative model of pathway convergence in genetically heterogeneous blast crisis chronic myeloid leukemia. Blood. PMID 32157296 DOI: 10.1182/Blood.2020004834  0.308
2016 Wang SR, Malik S, Tan IB, Chan YS, Hoi Q, Ow JL, He CZ, Ching CE, Poh DY, Seah HM, Cheung KH, Perumal D, Devasia AG, Pan L, Ang S, ... ... Ng PC, et al. Technical Validation of a Next-Generation Sequencing Assay for Detecting Actionable Mutations in Patients with Gastrointestinal Cancer. The Journal of Molecular Diagnostics : Jmd. PMID 26970585 DOI: 10.1016/J.Jmoldx.2016.01.006  0.312
2016 Vaser R, Adusumalli S, Leng SN, Sikic M, Ng PC. SIFT missense predictions for genomes. Nature Protocols. 11: 1-9. PMID 26633127 DOI: 10.1038/nprot.2015.123  0.34
2014 Brownstein CA, Beggs AH, Homer N, Merriman B, Yu TW, Flannery KC, DeChene ET, Towne MC, Savage SK, Price EN, Holm IA, Luquette LJ, Lyon E, Majzoub J, Neupert P, ... ... Ng PC, et al. An international effort towards developing standards for best practices in analysis, interpretation and reporting of clinical genome sequencing results in the CLARITY Challenge. Genome Biology. 15: R53. PMID 24667040 DOI: 10.1186/Gb-2014-15-3-R53  0.321
2013 Hu J, Ng PC. SIFT Indel: predictions for the functional effects of amino acid insertions/deletions in proteins. Plos One. 8: e77940. PMID 24194902 DOI: 10.1371/Journal.Pone.0077940  0.476
2012 Krishnan VG, Ng PC. Predicting cancer drivers: are we there yet? Genome Medicine. 4: 88. PMID 23181697 DOI: 10.1186/Gm389  0.356
2012 Sim NL, Kumar P, Hu J, Henikoff S, Schneider G, Ng PC. SIFT web server: predicting effects of amino acid substitutions on proteins. Nucleic Acids Research. 40: W452-7. PMID 22689647 DOI: 10.1093/Nar/Gks539  0.567
2012 Hu J, Ng PC. Predicting the effects of frameshifting indels. Genome Biology. 13: R9. PMID 22322200 DOI: 10.1186/Gb-2012-13-2-R9  0.441
2009 Kumar P, Henikoff S, Ng PC. Predicting the effects of coding non-synonymous variants on protein function using the SIFT algorithm. Nature Protocols. 4: 1073-81. PMID 19561590 DOI: 10.1038/Nprot.2009.86  0.607
2008 Ng PC, Levy S, Huang J, Stockwell TB, Walenz BP, Li K, Axelrod N, Busam DA, Strausberg RL, Venter JC. Genetic variation in an individual human exome. Plos Genetics. 4: e1000160. PMID 18704161 DOI: 10.1371/journal.pgen.1000160  0.339
2008 Chao EC, Velasquez JL, Witherspoon MS, Rozek LS, Peel D, Ng P, Gruber SB, Watson P, Rennert G, Anton-Culver H, Lynch H, Lipkin SM. Accurate classification of MLH1/MSH2 missense variants with multivariate analysis of protein polymorphisms-mismatch repair (MAPP-MMR). Human Mutation. 29: 852-60. PMID 18383312 DOI: 10.1002/Humu.20735  0.305
2006 Ng PC, Henikoff S. Predicting the effects of amino acid substitutions on protein function Annual Review of Genomics and Human Genetics. 7: 61-80. PMID 16824020 DOI: 10.1146/Annurev.Genom.7.080505.115630  0.622
2003 Ng PC, Henikoff S. SIFT: Predicting amino acid changes that affect protein function. Nucleic Acids Research. 31: 3812-4. PMID 12824425 DOI: 10.1093/Nar/Gkg509  0.599
2003 Ng PC, Henikoff S. SIFT: Predicting amino acid changes that affect protein function Nucleic Acids Research. 31: 3812-3814. DOI: 10.1093/nar/gkg509  0.55
2002 Ng PC, Henikoff S. Accounting for human polymorphisms predicted to affect protein function Genome Research. 12: 436-446. PMID 11875032 DOI: 10.1101/Gr.212802  0.575
2001 Ng PC, Henikoff S. Predicting deleterious amino acid substitutions Genome Research. 11: 863-874. PMID 11337480 DOI: 10.1101/Gr.176601  0.608
2000 Ng PC, Henikoff JG, Henikoff S. PHAT: a transmembrane-specific substitution matrix. Predicted hydrophobic and transmembrane. Bioinformatics (Oxford, England). 16: 760-6. PMID 11108698 DOI: 10.1093/bioinformatics/16.9.760  0.499
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