Jason H. Yang, PhD - Publications

Biological Engineering Massachusetts Institute of Technology, Cambridge, MA, United States 
systems biology

37 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Lopatkin AJ, Stokes JM, Zheng EJ, Yang JH, Takahashi MK, You L, Collins JJ. Bacterial metabolic state more accurately predicts antibiotic lethality than growth rate. Nature Microbiology. PMID 31451773 DOI: 10.1038/s41564-019-0536-0  1
2019 Yang JH, Wright SN, Hamblin M, McCloskey D, Alcantar MA, Schrübbers L, Lopatkin AJ, Satish S, Nili A, Palsson BO, Walker GC, Collins JJ. A White-Box Machine Learning Approach for Revealing Antibiotic Mechanisms of Action. Cell. PMID 31080069 DOI: 10.1016/j.cell.2019.04.016  1
2017 Yang JH, Bhargava P, McCloskey D, Mao N, Palsson BO, Collins JJ. Antibiotic-Induced Changes to the Host Metabolic Environment Inhibit Drug Efficacy and Alter Immune Function. Cell Host & Microbe. 22: 757-765.e3. PMID 29199098 DOI: 10.1016/j.chom.2017.10.020  1
2017 Yang JH, Bening SC, Collins JJ. Antibiotic efficacy-context matters. Current Opinion in Microbiology. 39: 73-80. PMID 29049930 DOI: 10.1016/j.mib.2017.09.002  1
2017 Takahashi N, Gruber CC, Yang JH, Liu X, Braff D, Yashaswini CN, Bhubhanil S, Furuta Y, Andreescu S, Collins JJ, Walker GC. Lethality of MalE-LacZ hybrid protein shares mechanistic attributes with oxidative component of antibiotic lethality. Proceedings of the National Academy of Sciences of the United States of America. PMID 28794281 DOI: 10.1073/pnas.1707466114  1
2017 Meylan S, Porter CB, Yang JH, Belenky P, Gutierrez A, Lobritz MA, Park J, Kim SH, Moskowitz SM, Collins JJ. Carbon Sources Tune Antibiotic Susceptibility in Pseudomonas aeruginosa via Tricarboxylic Acid Cycle Control. Cell Chemical Biology. PMID 28111098 DOI: 10.1016/j.chembiol.2016.12.015  1
2016 Wang YS, Wen ZQ, Li BT, Zhang HB, Yang JH. Ethnobotany, phytochemistry, and pharmacology of the Genus Litsea: An update. Journal of Ethnopharmacology. PMID 26812679 DOI: 10.1016/j.jep.2016.01.032  0.6
2016 Ryu JA, Bang OY, Suh GY, Yang JH, Lee D, Park J, Cho J, Chung CR, Park CM, Jeon K. Ischemic Stroke in Critically Ill Patients with Malignancy. Plos One. 11: e0146836. PMID 26751213 DOI: 10.1371/journal.pone.0146836  0.32
2016 Kim D, Chung H, Yi CH, Yoon YS, Son J, Kim Y, On MG, Yang J. Effect of glenohumeral position on contact pressure between the capsulolabral complex and the glenoid in free ALPSA and Bankart lesions. Knee Surgery, Sports Traumatology, Arthroscopy : Official Journal of the Esska. PMID 26724827 DOI: 10.1007/s00167-015-3962-4  0.64
2016 Yang JH, Yang D, Tang P, Ma D. Liquid-phase heterogeneous catalytic reactions by metal-free graphene-based catalysts Wuli Huaxue Xuebao/ Acta Physico - Chimica Sinica. 32: 75-84. DOI: 10.3866/PKU.WHXB201512153  0.32
2016 Duan D, Yang J, Yang JH, Tang YM, Wang YY. Human umbilical cord mesenchymal stem cells for treatment of cirrhosis World Chinese Journal of Digestology. 24: 262-267. DOI: 10.11569/wcjd.v24.i3.362  0.52
2016 Zhang AP, Yang JH. Advances in understanding pathogenesis of primary biliary cholangitis World Chinese Journal of Digestology. 24: 169-175. DOI: 10.11569/wcjd.v24.i2.169  0.44
2016 Kim SB, Kim DS, Yang JH, Lee J, Kim SW. Utilization of hydrolysate from lignocellulosic biomass pretreatment to generate electricity by enzymatic fuel cell system Enzyme and Microbial Technology. 85: 32-37. DOI: 10.1016/j.enzmictec.2016.01.008  0.68
2016 Tu SL, Chen TH, Su YH, Yang JH. Optoelectronic properties of morning glory as dye on TiO2 thin film Optical and Quantum Electronics. 48: 1-9. DOI: 10.1007/s11082-016-0391-7  0.32
2015 Wan Z, Zhang TF, Lee HB, Kim KH, Kwon SH. Improved Corrosion Resistance and Mechanical Properties of CrN Hard Coatings with Atomic Layer Deposited Al2O3 Interlayer. Acs Applied Materials & Interfaces. PMID 26554497 DOI: 10.1021/acsami.5b08696  0.32
2015 Do SI, Kim DH, Yang JH, Pyo JS, Kim K, Lee H, Do IG, Kim DH, Chae SW, Sohn JH. Decreased expression of p27 is associated with malignant transformation and extrathyroidal extension in papillary thyroid carcinoma. Tumour Biology : the Journal of the International Society For Oncodevelopmental Biology and Medicine. PMID 26446458 DOI: 10.1007/s13277-015-4163-y  0.32
2015 Lee DS, Chung CR, Jeon K, Park CM, Suh GY, Song YB, Hahn JY, Choi SH, Choi JH, Gwon HC, Yang JH. Survival After Extracorporeal Cardiopulmonary Resuscitation on Weekends in Comparison With Weekdays. The Annals of Thoracic Surgery. PMID 26431921 DOI: 10.1016/j.athoracsur.2015.06.077  0.32
2015 Song PS, Seol SH, Seo GW, Kim DK, Kim KH, Yang JH, Hahn JY, Gwon HC, Ahn Y, Jeong MH, Song YB, Kim DI. Comparative Effectiveness of Angiotensin II Receptor Blockers Versus Angiotensin-Converting Enzyme Inhibitors Following Contemporary Treatments in Patients with Acute Myocardial Infarction: Results from the Korean Working Group in Myocardial Infarction (KorMI) Registry. American Journal of Cardiovascular Drugs : Drugs, Devices, and Other Interventions. PMID 26153396 DOI: 10.1007/s40256-015-0140-5  0.4
2015 Lobritz MA, Belenky P, Porter CB, Gutierrez A, Yang JH, Schwarz EG, Dwyer DJ, Khalil AS, Collins JJ. Antibiotic efficacy is linked to bacterial cellular respiration. Proceedings of the National Academy of Sciences of the United States of America. PMID 26100898 DOI: 10.1073/pnas.1509743112  1
2015 Kim MYo, Choi N, Yang JH, Yoo YBu, Park KSi. False positive or negative results of shear-wave elastography in differentiating benign from malignant breast masses: analysis of clinical and ultrasonographic characteristics Acta Radiologica (Stockholm, Sweden : 1987). 56: 1155-1162. PMID 25277386 DOI: 10.1177/0284185114551400  0.36
2015 Yoo JM, Jeong MJ, Kim D, Stockwell WR, Yang JH, Shin HW, Lee MI, Song CK, Lee SD. Spatiotemporal variations of air pollutants (O3, NO2, SO2, CO, PM10, and VOCs) with land-use types Atmospheric Chemistry and Physics. 15: 10857-10885. DOI: 10.5194/acp-15-10857-2015  0.64
2015 Meng Y, Ye Q, Yang JH. Comprehensive utilization of aromatic hydrocarbon extracted oil and optimization of separation schemes Xiandai Huagong/Modern Chemical Industry. 35: 141-144. DOI: 10.16606/j.cnki.issn0253-4320.2015.12.038  0.4
2015 Yang JH, Kim BK, Kim YC. Theoretical analysis for proton conductivity at Σ3 tilt grain boundary of barium cerate Journal of Nanoscience and Nanotechnology. 15: 8584-8588. DOI: 10.1166/jnn.2015.11491  0.32
2015 Fan JH, Yang JH, Liu Y, Cai W, Lin C. Spectral energy distributions and some correlations for Fermi blazars International Journal of Modern Physics A. 30. DOI: 10.1142/S0217751X15450207  0.4
2015 Yang JH, Kim HJ. Design of collision warning system based on performance-based approach that considers driver behavior 2015 10th Asian Control Conference: Emerging Control Techniques For a Sustainable World, Ascc 2015. DOI: 10.1109/ASCC.2015.7244820  0.32
2015 Yang JH, Kim KH, Kim CS, Choi HW. Characteristics of Dye-Sensitized Solar Cells Using TiO2 Nanotube Arrays with Large Surface Area by Spin-Coating Nanoparticle Molecular Crystals and Liquid Crystals. 620: 91-99. DOI: 10.1080/15421406.2015.1094882  0.32
2015 Yang JH, Cho HK, Kim S, Euh DJ, Park GC. Experimental study on two-dimensional film flow with local measurement methods Nuclear Engineering and Design. 294: 137-151. DOI: 10.1016/j.nucengdes.2015.07.073  0.36
2015 Pang HX, Hui YH, Fan K, Xing XJ, Wu Y, Yang JH, Shi W, Xie ZF. A catalysis study of mesoporous MCM-41 supported Schiff base and CuSO4·5H2O in a highly regioselective synthesis of 4-thiazolidinone derivatives from cyclocondensation of mercaptoacetic acid Chinese Chemical Letters. DOI: 10.1016/j.cclet.2015.10.029  0.32
2015 Jun HI, Jang H, Ahn D, Kim DK, Yang JH, Yun BS, Kim YS. Isolation and characterization of phenolic compound from Allium hookeri root for potential use as antioxidant in foods Food Science and Biotechnology. 24: 2031-2034. DOI: 10.1007/s10068-015-0269-7  0.4
2014 Dwyer DJ, Belenky PA, Yang JH, MacDonald IC, Martell JD, Takahashi N, Chan CT, Lobritz MA, Braff D, Schwarz EG, Ye JD, Pati M, Vercruysse M, Ralifo PS, Allison KR, et al. Antibiotics induce redox-related physiological alterations as part of their lethality. Proceedings of the National Academy of Sciences of the United States of America. 111: E2100-9. PMID 24803433 DOI: 10.1073/pnas.1401876111  1
2014 Yang JH, Polanowska-Grabowska RK, Smith JS, Shields CW, Saucerman JJ. PKA catalytic subunit compartmentation regulates contractile and hypertrophic responses to β-adrenergic signaling. Journal of Molecular and Cellular Cardiology. 66: 83-93. PMID 24225179 DOI: 10.1016/j.yjmcc.2013.11.001  1
2012 Sample V, DiPilato LM, Yang JH, Ni Q, Saucerman JJ, Zhang J. Regulation of nuclear PKA revealed by spatiotemporal manipulation of cyclic AMP. Nature Chemical Biology. 8: 375-82. PMID 22366721 DOI: 10.1038/nchembio.799  1
2012 Yang JH, Saucerman JJ. Phospholemman is a negative feed-forward regulator of Ca2+ in β-adrenergic signaling, accelerating β-adrenergic inotropy. Journal of Molecular and Cellular Cardiology. 52: 1048-55. PMID 22289214 DOI: 10.1016/j.yjmcc.2011.12.015  1
2011 Yang JH, Saucerman JJ. Computational models reduce complexity and accelerate insight into cardiac signaling networks. Circulation Research. 108: 85-97. PMID 21212391 DOI: 10.1161/CIRCRESAHA.110.223602  1
2011 Benedict KF, Mac Gabhann F, Amanfu RK, Chavali AK, Gianchandani EP, Glaw LS, Oberhardt MA, Thorne BC, Yang JH, Papin JA, Peirce SM, Saucerman JJ, Skalak TC. Systems analysis of small signaling modules relevant to eight human diseases. Annals of Biomedical Engineering. 39: 621-35. PMID 21132372 DOI: 10.1007/s10439-010-0208-y  1
2005 Gurewitsch ED, Kim EJ, Yang JH, Outland KE, McDonald MK, Allen RH. Comparing McRoberts' and Rubin's maneuvers for initial management of shoulder dystocia: an objective evaluation. American Journal of Obstetrics and Gynecology. 192: 153-60. PMID 15672018 DOI: 10.1016/j.ajog.2004.05.055  1
2004 Kim EJ, Allen RH, Yang JH, McDonald MK, Tam W, Gurewitsch ED. Simulating complicated human birth for research and training. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 4: 2762-6. PMID 17270849 DOI: 10.1109/IEMBS.2004.1403790  1
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