| Year |
Citation |
Score |
| 2022 |
Bai Y, Liu H, Zhu K, Cheng ZM. Evolution and functional analysis of the GRAS family genes in six Rosaceae species. Bmc Plant Biology. 22: 569. PMID 36471247 DOI: 10.1186/s12870-022-03925-x |
0.369 |
|
| 2022 |
Hu XL, Zhang J, Kaundal R, Kataria R, Labbé JL, Mitchell JC, Tschaplinski TJ, Tuskan GA, Cheng ZM, Yang X. Diversity and conservation of plant small secreted proteins associated with arbuscular mycorrhizal symbiosis. Horticulture Research. PMID 35184190 DOI: 10.1093/hr/uhac043 |
0.359 |
|
| 2022 |
Zhong Y, Chen Z, Cheng ZM. Different scales of gene duplications occurring at different times have jointly shaped the NBS-LRR genes in Prunus species. Molecular Genetics and Genomics : Mgg. PMID 35031863 DOI: 10.1007/s00438-021-01849-z |
0.344 |
|
| 2021 |
Zhong Y, Wang P, Zhang X, Cheng ZM. Recent Duplications Dominate VQ and WRKY Gene Expansions in Six Species. International Journal of Genomics. 2021: 4066394. PMID 34961840 DOI: 10.1155/2021/4066394 |
0.372 |
|
| 2021 |
Zhong Y, Zhang X, Shi Q, Cheng ZM. Adaptive evolution driving the young duplications in six Rosaceae species. Bmc Genomics. 22: 112. PMID 33563208 DOI: 10.1186/s12864-021-07422-7 |
0.322 |
|
| 2020 |
Liu H, Lyu HM, Zhu K, Van de Peer Y, Cheng ZM. The emergence and evolution of intron-poor and intronless genes in intron-rich plant gene families. The Plant Journal : For Cell and Molecular Biology. PMID 33217085 DOI: 10.1111/tpj.15088 |
0.357 |
|
| 2020 |
Liu C, Xu X, Kan J, Cheng ZM, Chang Y, Lin J, Li H. Genome-wide analysis of the C3H zinc finger family reveals its functions in salt stress responses of . Peerj. 8: e9328. PMID 32566409 DOI: 10.7717/peerj.9328 |
0.314 |
|
| 2019 |
Yang S, Hu Y, Cheng Z, Rice JH, Miao L, Ma J, Hewezi T, Li Y, Gai J. An efficient Agrobacterium-mediated soybean transformation method using green fluorescent protein as a selectable marker. Plant Signaling & Behavior. 1-7. PMID 31056001 DOI: 10.1080/15592324.2019.1612682 |
0.356 |
|
| 2019 |
Hu X, Hao C, Cheng ZM, Zhong Y. Genome-Wide Identification, Characterization, and Expression Analysis of the Grapevine Superoxide Dismutase (SOD) Family. International Journal of Genomics. 2019: 7350414. PMID 30923713 DOI: 10.1155/2019/7350414 |
0.446 |
|
| 2019 |
Ma Y, Wang L, Wang J, Zhong Y, Cheng ZM. Isolation and expression analysis of Salt Overly Sensitive gene family in grapevine (Vitisvinifera) in response to salt and PEG stress. Plos One. 14: e0212666. PMID 30889180 DOI: 10.1371/journal.pone.0212666 |
0.317 |
|
| 2019 |
Liu J, Chu J, Ma C, Jiang Y, Ma Y, Xiong J, Cheng ZM. Overexpression of an ABA-dependent grapevine bZIP transcription factor, VvABF2, enhances osmotic stress in Arabidopsis. Plant Cell Reports. PMID 30712103 DOI: 10.1007/S00299-019-02389-Y |
0.427 |
|
| 2019 |
Zhong Y, Tong Y, Cheng Z. Specific differentially expressed genes in response to powdery mildew infection in Fragaria vesca Journal of Berry Research. 9: 363-375. DOI: 10.3233/Jbr-180354 |
0.366 |
|
| 2019 |
Wang X, Chen X, Cheng Q, Zhu K, Yang X, Cheng Z. Agrobacterium–mediated Transformation of Kalanchoe laxiflora Horticultural Plant Journal. 5: 221-228. DOI: 10.1016/J.Hpj.2019.07.001 |
0.399 |
|
| 2018 |
Zhang S, Tong Y, Li Y, Cheng ZM, Zhong Y. Genome-wide identification of the HKT genes in five Rosaceae species and expression analysis of HKT genes in response to salt-stress in Fragaria vesca. Genes & Genomics. PMID 30456525 DOI: 10.1007/S13258-018-0767-0 |
0.426 |
|
| 2018 |
Liu C, Li H, Lin J, Wang Y, Xu X, Cheng ZM, Chang Y. Genome-Wide Characterization of DNA Demethylase Genes and Their Association with Salt Response in Pyrus. Genes. 9. PMID 30082643 DOI: 10.3390/genes9080398 |
0.327 |
|
| 2018 |
Dong C, Ma Y, Zheng D, Wisniewski M, Cheng ZM. Meta-Analysis of the Effect of Overexpression of Dehydration-Responsive Element Binding Family Genes on Temperature Stress Tolerance and Related Responses. Frontiers in Plant Science. 9: 713. PMID 29896212 DOI: 10.3389/Fpls.2018.00713 |
0.359 |
|
| 2018 |
Zhong Y, Zhang X, Cheng ZM. Lineage-specific duplications of NBS-LRR genes occurring before the divergence of six Fragaria species. Bmc Genomics. 19: 128. PMID 29422035 DOI: 10.1186/S12864-018-4521-4 |
0.455 |
|
| 2018 |
Xiong J, Zhu H, Bai Y, Liu H, Cheng Z. RNA sequencing-based transcriptome analysis of mature strawberry fruit infected by necrotrophic fungal pathogen Botrytis cinerea Physiological and Molecular Plant Pathology. 104: 77-85. DOI: 10.1016/J.Pmpp.2018.08.005 |
0.374 |
|
| 2017 |
Xi Y, Liu J, Dong C, Cheng ZM. The CBL and CIPK Gene Family in Grapevine (Vitis vinifera): Genome-Wide Analysis and Expression Profiles in Response to Various Abiotic Stresses. Frontiers in Plant Science. 8: 978. PMID 28649259 DOI: 10.3389/fpls.2017.00978 |
0.335 |
|
| 2017 |
Ma Y, Cheng Q, Cheng Z, Li H, Chang Y, Lin J. Identification of Important Physiological Traits and Moderators That Are Associated with Improved Salt Tolerance in CBL and CIPK Overexpressors through a Meta-Analysis. Frontiers in Plant Science. 8: 856. PMID 28611796 DOI: 10.3389/Fpls.2017.00856 |
0.473 |
|
| 2017 |
Wang XL, Chen X, Yang TB, Cheng Q, Cheng ZM. Genome-Wide Identification of bZIP Family Genes Involved in Drought and Heat Stresses in Strawberry (Fragaria vesca). International Journal of Genomics. 2017: 3981031. PMID 28487861 DOI: 10.1155/2017/3981031 |
0.444 |
|
| 2017 |
Hu X, Zhong Y, Huang K, Wang S, Cheng Q, Cheng Z. Differential expression of 12 NBS-encoding genes in two apple cultivars in response to Alternaria alternata f. sp. mali infection Canadian Journal of Plant Science. 98: 279-287. DOI: 10.1139/Cjps-2017-0117 |
0.365 |
|
| 2017 |
Dong C, Ma Y, Wisniewski M, Cheng Z. Meta-analysis of the effect of overexpression of CBF/DREB family genes on drought stress response Environmental and Experimental Botany. 142: 1-14. DOI: 10.1016/J.Envexpbot.2017.07.014 |
0.444 |
|
| 2017 |
Li Y, Zhong Y, Huang K, Cheng Z. Erratum to: Genomewide analysis of NBS-encoding genes in kiwi fruit (Actinidia chinensis) Journal of Genetics. 96: 211-211. DOI: 10.1007/S12041-017-0764-0 |
0.434 |
|
| 2017 |
Liu H, Zhong Y, Guo C, Wang X, Xiong J, Cheng Q, Cheng Z. Genome-wide analysis and evolution of the bZIP transcription factor gene family in six Fragaria species Plant Systematics and Evolution. 303: 1225-1237. DOI: 10.1007/S00606-017-1433-8 |
0.371 |
|
| 2016 |
Li Y, Zhong Y, Huang K, Cheng ZM. Genomewide analysis of NBS-encoding genes in kiwi fruit (Actinidia chinensis). Journal of Genetics. 95: 997-1001. PMID 27994200 DOI: 10.1007/S12041-016-0700-8 |
0.433 |
|
| 2016 |
Tang J, Lin J, Li H, Li X, Yang Q, Cheng ZM, Chang Y. Characterization of CIPK Family in Asian Pear (Pyrus bretschneideri Rehd) and Co-expression Analysis Related to Salt and Osmotic Stress Responses. Frontiers in Plant Science. 7: 1361. PMID 27656193 DOI: 10.3389/Fpls.2016.01361 |
0.341 |
|
| 2016 |
Huang K, Zhong Y, Li Y, Zheng D, Cheng ZM. Genome-wide identification and expression analysis of the apple ASR gene family in response to Alternaria alternata f. sp. mali. Genome / National Research Council Canada = Genome / Conseil National De Recherches Canada. 1-13. PMID 27653246 DOI: 10.1139/Gen-2016-0043 |
0.448 |
|
| 2016 |
Ma Y, Robert A, Dong C, Cheng ZM. Increased salt tolerance with overexpression of cation/proton antiporter 1 genes: ameta-analysis. Plant Biotechnology Journal. PMID 27383431 DOI: 10.1111/pbi.12599 |
0.402 |
|
| 2016 |
Zhu K, Chen F, Liu J, Chen X, Hewezi T, Cheng ZM. Evolution of an intron-poor cluster of the CIPK gene family and expression in response to drought stress in soybean. Scientific Reports. 6: 28225. PMID 27311690 DOI: 10.1038/srep28225 |
0.363 |
|
| 2016 |
Czarnecki O, Bryan AC, Jawdy SS, Yang X, Cheng ZM, Chen JG, Tuskan GA. Simultaneous knockdown of six non-family genes using a single synthetic RNAi fragment in Arabidopsis thaliana. Plant Methods. 12: 16. PMID 26889205 DOI: 10.1186/S13007-016-0116-8 |
0.51 |
|
| 2015 |
Wang XL, Zhong Y, Cheng ZM, Xiong JS. Divergence of the bZIP Gene Family in Strawberry, Peach, and Apple Suggests Multiple Modes of Gene Evolution after Duplication. International Journal of Genomics. 2015: 536943. PMID 26770968 DOI: 10.1155/2015/536943 |
0.434 |
|
| 2015 |
Zhong Y, Li Y, Huang K, Cheng ZM. Species-specific duplications of NBS-encoding genes in Chinese chestnut (Castanea mollissima). Scientific Reports. 5: 16638. PMID 26559332 DOI: 10.1038/Srep16638 |
0.463 |
|
| 2015 |
Liu J, Chen N, Grant JN, Cheng ZM, Stewart CN, Hewezi T. Soybean kinome: functional classification and gene expression patterns. Journal of Experimental Botany. 66: 1919-34. PMID 25614662 DOI: 10.1093/Jxb/Eru537 |
0.341 |
|
| 2014 |
Liang YH, Cai B, Chen F, Wang G, Wang M, Zhong Y, Cheng ZM. Construction and validation of a gene co-expression network in grapevine (Vitis vinifera. L.). Horticulture Research. 1: 14040. PMID 26504546 DOI: 10.1038/hortres.2014.40 |
0.334 |
|
| 2014 |
Wang G, Lovato A, Polverari A, Wang M, Liang YH, Ma YC, Cheng ZM. Genome-wide identification and analysis of mitogen activated protein kinase kinase kinase gene family in grapevine (Vitis vinifera). Bmc Plant Biology. 14: 219. PMID 25158790 DOI: 10.1186/S12870-014-0219-1 |
0.335 |
|
| 2014 |
Lin W, Cai B, Cheng Z. Identification and characterization of lineage-specific genes in Populus trichocarpa Plant Cell Tissue and Organ Culture. 116: 217-225. DOI: 10.1007/S11240-013-0397-9 |
0.458 |
|
| 2013 |
Chen F, Fasoli M, Tornielli GB, Dal Santo S, Pezzotti M, Zhang L, Cai B, Cheng ZM. The evolutionary history and diverse physiological roles of the grapevine calcium-dependent protein kinase gene family. Plos One. 8: e80818. PMID 24324631 DOI: 10.1371/Journal.Pone.0080818 |
0.407 |
|
| 2013 |
Kayesh E, Shangguan L, Korir NK, Sun X, Bilkish N, Zhang Y, Han J, Song C, Cheng Z, Fang J. Fruit skin color and the role of anthocyanin Acta Physiologiae Plantarum. 35: 2879-2890. DOI: 10.1007/S11738-013-1332-8 |
0.452 |
|
| 2013 |
Lin W, Hagen E, Fulcher A, Hren MT, Cheng ZM. Overexpressing the ZmDof1 gene in Populus does not improve growth and nitrogen assimilation under low-nitrogen conditions Plant Cell, Tissue and Organ Culture. 113: 51-61. DOI: 10.1007/S11240-012-0250-6 |
0.454 |
|
| 2012 |
Gao Z, Luo X, Shi T, Cai B, Zhang Z, Cheng Z, Zhuang W. Identification and validation of potential conserved microRNAs and their targets in peach (Prunus persica). Molecules and Cells. 34: 239-49. PMID 22878892 DOI: 10.1007/S10059-012-0004-7 |
0.314 |
|
| 2012 |
Ye X, Yuan S, Guo H, Chen F, Tuskan GA, Cheng Z. Evolution and divergence in the coding and promoter regions of the Populus gene family encoding xyloglucan endotransglycosylase/hydrolases Tree Genetics & Genomes. 8: 177-194. DOI: 10.1007/S11295-011-0431-1 |
0.389 |
|
| 2011 |
Cai B, Yang X, Tuskan GA, Cheng ZM. MicroSyn: a user friendly tool for detection of microsynteny in a gene family. Bmc Bioinformatics. 12: 79. PMID 21418570 DOI: 10.1186/1471-2105-12-79 |
0.355 |
|
| 2011 |
Yang X, Ye C, Cheng Z, Tschaplinski TJ, Wullschleger SD, Yin W, Xia X, Tuskan GA. Genomic aspects of research involving polyploid plants Plant Cell Tissue and Organ Culture. 104: 387-397. DOI: 10.1007/S11240-010-9826-1 |
0.378 |
|
| 2010 |
Xiong AS, Yao QH, Peng RH, Cheng ZM. Directed in vitro evolution of reporter genes based on semi-rational design and high-throughput screening. Methods in Molecular Biology (Clifton, N.J.). 634: 239-56. PMID 20676989 DOI: 10.1007/978-1-60761-652-8_18 |
0.365 |
|
| 2010 |
Kang BG, Ye X, Osburn LD, Stewart CN, Cheng ZM. Transgenic hybrid aspen overexpressing the Atwbc19 gene encoding an ATP-binding cassette transporter confers resistance to four aminoglycoside antibiotics. Plant Cell Reports. 29: 643-50. PMID 20383769 DOI: 10.1007/S00299-010-0850-8 |
0.433 |
|
| 2009 |
Zhao N, Guan J, Forouhar F, Tschaplinski TJ, Cheng ZM, Tong L, Chen F. Two poplar methyl salicylate esterases display comparable biochemical properties but divergent expression patterns. Phytochemistry. 70: 32-9. PMID 19136124 DOI: 10.1016/J.Phytochem.2008.11.014 |
0.416 |
|
| 2009 |
Osburn LD, Yang X, Li Y, Cheng Z. Micropropagation of Japanese honeysuckle (Lonicera japonica) and Amur honeysuckle (L. maackii) by shoot tip culture. Journal of Environmental Horticulture. 27: 195-199. DOI: 10.24266/0738-2898-27.4.195 |
0.371 |
|
| 2009 |
Yang X, Kalluri UC, DiFazio SP, Wullschleger SD, Tschaplinski TJ, Cheng ZM, Tuskan GA. Poplar genomics: State of the science Critical Reviews in Plant Sciences. 28: 285-308. DOI: 10.1080/07352680903241014 |
0.352 |
|
| 2009 |
Kang B, Osburn L, Kopsell D, Tuskan GA, Cheng Z. Micropropagation of Populus trichocarpa ‘Nisqually-1’: the genotype deriving the Populus reference genome Plant Cell Tissue and Organ Culture. 99: 251-257. DOI: 10.1007/S11240-009-9596-9 |
0.383 |
|
| 2009 |
Ye X, Kang B, Osburn LD, Cheng Z. The COBRA gene family in Populus and gene expression in vegetative organs and in response to hormones and environmental stresses Plant Growth Regulation. 58: 211-223. DOI: 10.1007/S10725-009-9369-9 |
0.433 |
|
| 2008 |
Xiong AS, Peng RH, Zhuang J, Gao F, Li Y, Cheng ZM, Yao QH. Chemical gene synthesis: strategies, softwares, error corrections, and applications. Fems Microbiology Reviews. 32: 522-40. PMID 18393987 DOI: 10.1111/J.1574-6976.2008.00109.X |
0.394 |
|
| 2008 |
Xiong AS, Peng RH, Zhuang J, Liu JG, Gao F, Chen JM, Cheng ZM, Yao QH. Non-polymerase-cycling-assembly-based chemical gene synthesis: strategies, methods, and progress. Biotechnology Advances. 26: 121-34. PMID 18068327 DOI: 10.1016/J.Biotechadv.2007.10.001 |
0.412 |
|
| 2007 |
Yuan JS, Yang X, Lai J, Lin H, Cheng ZM, Nonogaki H, Chen F. The endo-beta-mannanase gene families in Arabidopsis, rice, and poplar. Functional & Integrative Genomics. 7: 1-16. PMID 16897088 DOI: 10.1007/S10142-006-0034-3 |
0.382 |
|
| 2007 |
Yang X, Tuskan GA, Tschaplinski TJ, Cheng Z. Third-codon transversion rate-based Nymphaea basal angiosperm phylogeny—concordance with developmental evidence Nature Precedings. 2: 1-1. DOI: 10.1038/Npre.2007.320.1 |
0.338 |
|
| 2006 |
Yang X, Tuskan GA, Cheng Z. Divergence of the Dof Gene Families in Poplar, Arabidopsis, and Rice Suggests Multiple Modes of Gene Evolution after Duplication Plant Physiology. 142: 820-830. PMID 16980566 DOI: 10.1104/Pp.106.083642 |
0.47 |
|
| 2006 |
Peng RH, Yao QH, Xiong AS, Cheng ZM, Li Y. Codon-modifications and an endoplasmic reticulum-targeting sequence additively enhance expression of an Aspergillus phytase gene in transgenic canola. Plant Cell Reports. 25: 124-32. PMID 16249870 DOI: 10.1007/S00299-005-0036-Y |
0.445 |
|
| 2006 |
Li Y, Cheng Z, Smith W, Ellis D, Chen Y, Lu L, Mcavoy RJ, Pei Y, Deng W, Thammina C, Zheng X, Duan H, Luo K, Zhao D. Problems and Challenges of Invasive Ornamental Plants and Molecular Tools to Control Their Spread Journal of Crop Improvement. 17: 279-301. DOI: 10.1300/J411V17N01_11 |
0.378 |
|
| 2006 |
Cheng ZM, Dai W, Bosela MJ, Osburn LD. Genetic engineering approach to enhance adventitious root formation of hardwood cuttings Journal of Crop Improvement. 17: 211-225. DOI: 10.1300/J411V17N01_07 |
0.64 |
|
| 2006 |
Zhang Z, Sun A, Cong Y, Sheng B, Yao Q, Cheng Z. Agrobacterium-mediated transformation of the apple rootstock Malus micromalus Makino with the RolC gene In Vitro Cellular & Developmental Biology - Plant. 42: 491-497. DOI: 10.1079/Ivp2006812 |
0.461 |
|
| 2005 |
Li X, Peng RH, Fan HQ, Xiong AS, Yao QH, Cheng ZM, Li Y. Vitreoscilla hemoglobin overexpression increases submergence tolerance in cabbage. Plant Cell Reports. 23: 710-5. PMID 15747159 DOI: 10.1007/S00299-004-0872-1 |
0.493 |
|
| 2005 |
Labbé N, Rials TG, Kelley SS, Cheng Z, Kim J, Li Y. FT-IR imaging and pyrolysis-molecular beam mass spectrometry: New tools to investigate wood tissues Wood Science and Technology. 39: 61-76. DOI: 10.1007/S00226-004-0274-0 |
0.304 |
|
| 2004 |
Xiong AS, Yao QH, Peng RH, Li X, Fan HQ, Cheng ZM, Li Y. A simple, rapid, high-fidelity and cost-effective PCR-based two-step DNA synthesis method for long gene sequences. Nucleic Acids Research. 32: e98. PMID 15240836 DOI: 10.1093/Nar/Gnh094 |
0.303 |
|
| 2004 |
Peng R, Yao Q, Xiong A, Fan H, Li X, Peng Y, Cheng ZM, Li Y. A new rice zinc-finger protein binds to the O2S box of the alpha-amylase gene promoter. European Journal of Biochemistry / Febs. 271: 2949-55. PMID 15233790 DOI: 10.1111/J.1432-1033.2004.04221.X |
0.364 |
|
| 2004 |
Dai W, Jacques V, Walla JA, Cheng Z. Plant Regeneration of Chokecherry (Prunus virginiana L.) from in vitro Leaf Tissues Journal of Environmental Horticulture. 22: 225-228. DOI: 10.24266/0738-2898-22.4.225 |
0.379 |
|
| 2004 |
Li Y, Cheng Z, Smith WA, Ellis DR, Chen Y, Zheng X, Pei Y, Luo K, Zhao D, Yao Q, Duan H, Li Q. Invasive ornamental plants: Problems, challenges, and molecular tools to neutralize their invasiveness Critical Reviews in Plant Sciences. 23: 381-389. DOI: 10.1080/07352680490505123 |
0.367 |
|
| 2004 |
Dai W, Cheng Z, Sargent WA. EXPRESSION OF THE rolB GENE ENHANCES ADVENTITIOUS ROOT FORMATION IN HARDWOOD CUTTINGS OF ASPEN In Vitro Cellular & Developmental Biology – Plant. 40: 366-370. DOI: 10.1079/Ivp2004556 |
0.627 |
|
| 2003 |
Guo Y, Cheng Z, Walla JA. Rapid PCR-based Detection of Phytoplasmas from Infected Plants Hortscience. 38: 1134-1136. DOI: 10.21273/Hortsci.38.6.1134 |
0.349 |
|
| 2000 |
Zhang Z, Dai W, Cheng Z, Walla JA. A shoot-tip culture micropropagation system for chokecherry. Journal of Environmental Horticulture. 18: 234-237. DOI: 10.24266/0738-2898-18.4.234 |
0.364 |
|
| 2000 |
Dai W, Cheng Z, Sargent W. 486 Expression of β-glucuronidase Gene in Aspen under Control of CaMV35S, Heat Shock and RolC Promoters Hortscience. 35: 478-478. DOI: 10.21273/Hortsci.35.3.478A |
0.522 |
|
| 2000 |
Dai W, Cheng Z, Sargent W. 042 Efficient Transformation of Elite Aspen Hybrids Hortscience. 35: 395-395. DOI: 10.21273/Hortsci.35.3.395D |
0.476 |
|
| 1999 |
Kapaun JA, Cheng Z. Aminoglycoside Antibiotics Inhibit Shoot Regeneration from Siberian Elm Leaf Explants Hortscience. 34: 727-729. DOI: 10.21273/Hortsci.34.4.727 |
0.325 |
|
| 1997 |
Kapaun JA, Cheng Z. Plant Regeneration from Leaf Tissues of Siberian Elm Hortscience. 32: 301-303. DOI: 10.21273/Hortsci.32.2.301 |
0.365 |
|
| 1996 |
Schnurr JP, Cheng Z, Boe AA. Effects of plant growth regulators on sturdiness of jack pine seedlings Journal of Environmental Horticulture. 14: 228-230. DOI: 10.24266/0738-2898-14.4.228 |
0.319 |
|
| 1995 |
Cheng ZM, Shi NQ. Micropropagation of mature siberian elm in two steps Plant Cell, Tissue and Organ Culture. 41: 197-199. DOI: 10.1007/Bf00051592 |
0.33 |
|
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