Year |
Citation |
Score |
2023 |
Putman TE, Schaper K, Matentzoglu N, Rubinetti VP, Alquaddoomi FS, Cox C, Caufield JH, Elsarboukh G, Gehrke S, Hegde H, Reese JT, Braun I, Bruskiewich RM, Cappelletti L, Carbon S, et al. The Monarch Initiative in 2024: an analytic platform integrating phenotypes, genes and diseases across species. Nucleic Acids Research. PMID 38000386 DOI: 10.1093/nar/gkad1082 |
0.386 |
|
2023 |
Caufield JH, Putman T, Schaper K, Unni DR, Hegde H, Callahan TJ, Cappelletti L, Moxon SAT, Ravanmehr V, Carbon S, Chan LE, Cortes K, Shefchek KA, Elsarboukh G, Balhoff J, et al. KG-Hub - Building and Exchanging Biological Knowledge Graphs. Bioinformatics (Oxford, England). PMID 37389415 DOI: 10.1093/bioinformatics/btad418 |
0.348 |
|
2023 |
Stefancsik R, Balhoff JP, Balk MA, Ball RL, Bello SM, Caron AR, Chesler EJ, de Souza V, Gehrke S, Haendel M, Harris LW, Harris NL, Ibrahim A, Koehler S, Matentzoglu N, ... ... Putman T, et al. The Ontology of Biological Attributes (OBA)-computational traits for the life sciences. Mammalian Genome : Official Journal of the International Mammalian Genome Society. PMID 37076585 DOI: 10.1007/s00335-023-09992-1 |
0.339 |
|
2023 |
Stefancsik R, Balhoff JP, Balk MA, Ball R, Bello SM, Caron AR, Chessler E, de Souza V, Gehrke S, Haendel M, Harris LW, Harris NL, Ibrahim A, Koehler S, Matentzoglu N, ... ... Putman T, et al. The Ontology of Biological Attributes (OBA) - Computational Traits for the Life Sciences. Biorxiv : the Preprint Server For Biology. PMID 36747660 DOI: 10.1101/2023.01.26.525742 |
0.345 |
|
2022 |
Unni DR, Moxon SAT, Bada M, Brush M, Bruskiewich R, Caufield JH, Clemons PA, Dancik V, Dumontier M, Fecho K, Glusman G, Hadlock JJ, Harris NL, Joshi A, Putman T, et al. Biolink Model: A universal schema for knowledge graphs in clinical, biomedical, and translational science. Clinical and Translational Science. 15: 1848-1855. PMID 36125173 DOI: 10.1111/cts.13302 |
0.381 |
|
2020 |
Waagmeester A, Stupp G, Burgstaller-Muehlbacher S, Good BM, Griffith M, Griffith OL, Hanspers K, Hermjakob H, Hudson TS, Hybiske K, Keating SM, Manske M, Mayers M, Mietchen D, Mitraka E, ... ... Putman T, et al. Wikidata as a knowledge graph for the life sciences. Elife. 9. PMID 32180547 DOI: 10.7554/Elife.52614 |
0.654 |
|
2020 |
Waagmeester A, Stupp G, Burgstaller-Muehlbacher S, Good BM, Griffith M, Griffith OL, Hanspers K, Hermjakob H, Hudson TS, Hybiske K, Keating SM, Manske M, Mayers M, Mietchen D, Mitraka E, ... ... Putman T, et al. Author response: Wikidata as a knowledge graph for the life sciences Elife. DOI: 10.7554/Elife.52614.Sa2 |
0.622 |
|
2019 |
Shefchek KA, Harris NL, Gargano M, Matentzoglu N, Unni D, Brush M, Keith D, Conlin T, Vasilevsky N, Zhang XA, Balhoff JP, Babb L, Bello SM, Blau H, Bradford Y, ... ... Putman T, et al. The Monarch Initiative in 2019: an integrative data and analytic platform connecting phenotypes to genotypes across species. Nucleic Acids Research. PMID 31701156 DOI: 10.1093/nar/gkz997 |
0.313 |
|
2019 |
Putman T, Hybiske K, Jow D, Afrasiabi C, Lelong S, Cano MA, Stupp GS, Waagmeester A, Good BM, Wu C, Su AI. ChlamBase: a curated model organism database for the Chlamydia research community. Database : the Journal of Biological Databases and Curation. 2019. PMID 31211397 DOI: 10.1093/database/baz091 |
0.739 |
|
2019 |
Putman T, Hybiske K, Jow D, Afrasiabi C, Lelong S, Cano MA, Wu C, Su AI. ChlamBase: a curated model organism database for the Chlamydia research community. Database : the Journal of Biological Databases and Curation. 2019. PMID 30985891 DOI: 10.1093/Database/Baz041 |
0.708 |
|
2017 |
Putman TE, Lelong S, Burgstaller-Muehlbacher S, Waagmeester A, Diesh C, Dunn N, Munoz-Torres M, Stupp GS, Wu C, Su AI, Good BM. WikiGenomes: an open web application for community consumption and curation of gene annotation data in Wikidata. Database : the Journal of Biological Databases and Curation. 2017. PMID 28365742 DOI: 10.1093/database/bax025 |
0.743 |
|
2017 |
Stupp GS, Queralt-Rosinach N, Putman T, Burgstaller-Muehlbacher S, Waagmeester A, Su AI, Good BM. Best practices for data provenance in Wikidata F1000research. 6. DOI: 10.7490/F1000Research.1113800.1 |
0.696 |
|
2016 |
Xin J, Mark A, Afrasiabi C, Tsueng G, Juchler M, Gopal N, Stupp GS, Putman TE, Ainscough BJ, Griffith OL, Torkamani A, Whetzel PL, Mungall CJ, Mooney SD, Su AI, et al. High-performance web services for querying gene and variant annotation. Genome Biology. 17: 91. PMID 27154141 DOI: 10.1186/S13059-016-0953-9 |
0.756 |
|
2016 |
Putman TE, Burgstaller-Muehlbacher S, Waagmeester A, Wu C, Su AI, Good BM. Centralizing content and distributing labor: a community model for curating the very long tail of microbial genomes. Database : the Journal of Biological Databases and Curation. 2016. PMID 27022157 DOI: 10.1093/Database/Baw028 |
0.781 |
|
2016 |
Burgstaller-Muehlbacher S, Waagmeester A, Mitraka E, Turner J, Putman T, Leong J, Naik C, Pavlidis P, Schriml L, Good BM, Su AI. Wikidata as a semantic framework for the Gene Wiki initiative. Database : the Journal of Biological Databases and Curation. 2016. PMID 26989148 DOI: 10.1093/Database/Baw015 |
0.766 |
|
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