Michael P. Brenner, Ph.D. - Publications

Affiliations: 
School of Engineering and Applied Sciences Harvard University, Cambridge, MA, United States 
Area:
Fluid Mechanics
Website:
http://www.deas.harvard.edu/brenner/Home.html

96 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Kimchi O, Brenner MP, Colwell LJ. Nucleic Acid Structure Prediction Including Pseudoknots Through Direct Enumeration of States: A User's Guide to the LandscapeFold Algorithm. Methods in Molecular Biology (Clifton, N.J.). 2586: 49-77. PMID 36705898 DOI: 10.1007/978-1-0716-2768-6_4  0.615
2022 Dillavou S, Bar-Sinai Y, Brenner MP, Rubinstein SM. Beyond quality and quantity: Spatial distribution of contact encodes frictional strength. Physical Review. E. 106: L033001. PMID 36266884 DOI: 10.1103/PhysRevE.106.L033001  0.607
2022 Du CX, Zhang HA, Pearson TG, Ng J, McEuen PL, Cohen I, Brenner MP. Programming interactions in magnetic handshake materials. Soft Matter. PMID 35979744 DOI: 10.1039/d2sm00604a  0.757
2021 Shrinivas K, Brenner MP. Phase separation in fluids with many interacting components. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 34725154 DOI: 10.1073/pnas.2108551118  0.755
2020 McKeown R, Ostilla-Mónico R, Pumir A, Brenner MP, Rubinstein SM. Turbulence generation through an iterative cascade of the elliptical instability. Science Advances. 6: eaaz2717. PMID 32158950 DOI: 10.1126/Sciadv.Aaz2717  0.663
2019 Falk MJ, Duwel A, Colwell LJ, Brenner MP. Collagen-Inspired Self-Assembly of Twisted Filaments. Physical Review Letters. 123: 238102. PMID 31868483 DOI: 10.1103/Physrevlett.123.238102  0.661
2019 Niu R, Du CX, Esposito E, Ng J, Brenner MP, McEuen PL, Cohen I. Magnetic handshake materials as a scale-invariant platform for programmed self-assembly. Proceedings of the National Academy of Sciences of the United States of America. PMID 31754038 DOI: 10.1073/Pnas.1910332116  0.757
2019 Kimchi O, Cragnolini T, Brenner MP, Colwell LJ. A Polymer Physics Framework for the Entropy of Arbitrary Pseudoknots. Biophysical Journal. 117: 520-532. PMID 31353036 DOI: 10.1016/J.Bpj.2019.06.037  0.658
2019 McCloskey K, Taly A, Monti F, Brenner MP, Colwell LJ. Using attribution to decode binding mechanism in neural network models for chemistry. Proceedings of the National Academy of Sciences of the United States of America. PMID 31127041 DOI: 10.1073/Pnas.1820657116  0.638
2019 Kimchi O, Cragnolini T, Garmann R, Manoharan VN, Brenner MP, Colwell LJ. RNA Structure and Kinetics Including Pseudoknots through Complete Landscape Enumeration Biophysical Journal. 116: 353a-354a. DOI: 10.1016/J.Bpj.2018.11.1922  0.633
2018 McKeown R, Ostilla-Mónico R, Pumir A, Brenner MP, Rubinstein SM. Cascade leading to the emergence of small structures in vortex ring collisions Physical Review Fluids. 3. DOI: 10.1103/Physrevfluids.3.124702  0.667
2017 Lee AA, Brenner MP, Colwell LJ. Optimal Design of Experiments by Combining Coarse and Fine Measurements. Physical Review Letters. 119: 208101. PMID 29219382 DOI: 10.1103/Physrevlett.119.208101  0.66
2017 Tanaka H, Lee AA, Brenner MP. Hot particles attract in a cold bath Physical Review Fluids. 2. DOI: 10.1103/Physrevfluids.2.043103  0.507
2016 Goodrich CP, Brenner MP. Using active colloids as machines to weave and braid on the micrometer scale. Proceedings of the National Academy of Sciences of the United States of America. PMID 28034922 DOI: 10.1073/Pnas.1608838114  0.304
2016 Tanaka H, Zeravcic Z, Brenner MP. Mutation at Expanding Front of Self-Replicating Colloidal Clusters. Physical Review Letters. 117: 238004. PMID 27982625 DOI: 10.1103/Physrevlett.117.238004  0.516
2016 Lee AA, Brenner MP, Colwell LJ. Predicting protein-ligand affinity with a random matrix framework. Proceedings of the National Academy of Sciences of the United States of America. PMID 27856761 DOI: 10.1073/Pnas.1611138113  0.645
2016 Wang X, Koehler SA, Wilking JN, Sinha NN, Cabeen MT, Srinivasan S, Seminara A, Rubinstein S, Sun Q, Brenner MP, Weitz DA. Probing phenotypic growth in expanding Bacillus subtilis biofilms. Applied Microbiology and Biotechnology. PMID 27003268 DOI: 10.1007/S00253-016-7461-4  0.721
2015 Mangan NM, Brenner MP. Correction: Systems analysis of the CO₂ concentrating mechanism in cyanobacteria. Elife. 4. PMID 25811952 DOI: 10.7554/Elife.06400  0.691
2015 Sher MJ, Mangan NM, Smith MJ, Lin YT, Marbach S, Schneider TM, Gradečak S, Brenner MP, Mazur E. Femtosecond-laser hyperdoping silicon in an SF6 atmosphere: Dopant incorporation mechanism Journal of Applied Physics. 117. DOI: 10.1063/1.4914520  0.702
2015 Lin YT, Mangan N, Marbach S, Schneider TM, Deng G, Zhou S, Brenner MP, Mazur E. Creating femtosecond-laser-hyperdoped silicon with a homogeneous doping profile Applied Physics Letters. 106. DOI: 10.1063/1.4907988  0.703
2014 Colwell LJ, Brenner MP, Murray AW. Conservation weighting functions enable covariance analyses to detect functionally important amino acids. Plos One. 9: e107723. PMID 25379728 DOI: 10.1371/Journal.Pone.0107723  0.644
2014 Zeravcic Z, Manoharan VN, Brenner MP. Size limits of self-assembled colloidal structures made using specific interactions. Proceedings of the National Academy of Sciences of the United States of America. 111: 15918-23. PMID 25349380 DOI: 10.1073/Pnas.1411765111  0.303
2014 Mangan N, Brenner M. Systems analysis of the CO2 concentrating mechanism in cyanobacteria. Elife. e02043. PMID 24842993 DOI: 10.7554/Elife.02043  0.698
2014 Colwell LJ, Qin Y, Huntley M, Manta A, Brenner MP. Feynman-Hellmann theorem and signal identification from sample covariance matrices Physical Review X. 4. DOI: 10.1103/Physrevx.4.031032  0.663
2014 Rowat AC, Sinha NN, Sorensen PM, Campàs O, Castells P, Rosenberg D, Brenner MP, Weitz DA. The kitchen as a physics classroom Physics Education. 49: 512-522. DOI: 10.1088/0031-9120/49/5/512  0.56
2013 Holmes-Cerfon M, Gortler SJ, Brenner MP. A geometrical approach to computing free-energy landscapes from short-ranged potentials Proceedings of the National Academy of Sciences of the United States of America. 110: E5-E14. PMID 23248296 DOI: 10.1073/Pnas.1211720110  0.32
2013 Hormoz S, Brenner MP. Non-universal and non-singular asymptotics of interacting vortex filaments Procedia Iutam. 7: 97-106. DOI: 10.1016/J.Piutam.2013.03.012  0.692
2012 Qin Y, Schneider TM, Brenner MP. Sequencing by hybridization of long targets Plos One. 7. PMID 22574124 DOI: 10.1371/Journal.Pone.0035819  0.391
2012 Kolinski JM, Rubinstein SM, Mandre S, Brenner MP, Weitz DA, Mahadevan L. Skating on a film of air: drops impacting on a surface. Physical Review Letters. 108: 074503. PMID 22401209 DOI: 10.1103/Physrevlett.108.074503  0.643
2012 Kaz DM, McGorty R, Mani M, Brenner MP, Manoharan VN. Physical ageing of the contact line on colloidal particles at liquid interfaces. Nature Materials. 11: 138-42. PMID 22138792 DOI: 10.1038/Nmat3190  0.562
2012 Kolinski JM, Rubinstein SM, Mandre S, Brenner MP, Weitz DA, Mahadevan L. Skating on a film of air: Drops impacting on a surface Physical Review Letters. 108. DOI: 10.1103/PhysRevLett.108.074503  0.592
2012 Kaz DM, McGorty R, Mani M, Brenner MP, Manoharan VN. Physical ageing of the contact line on colloidal particles at liquid interfaces Nature Materials. 11: 138-142. DOI: 10.1038/nmat3190  0.478
2012 Hormoz S, Brenner MP. Absence of singular stretching of interacting vortex filaments Journal of Fluid Mechanics. 707: 191-204. DOI: 10.1017/Jfm.2012.270  0.695
2012 Mandre S, Brenner MP. The mechanism of a splash on a dry solid surface Journal of Fluid Mechanics. 690: 148-172. DOI: 10.1017/Jfm.2011.415  0.323
2011 Norris SA, Samela J, Bukonte L, Backman M, Djurabekova F, Nordlund K, Madi CS, Brenner MP, Aziz MJ. Molecular dynamics of single-particle impacts predicts phase diagrams for large scale pattern formation. Nature Communications. 2: 276. PMID 21505432 DOI: 10.1038/Ncomms1280  0.317
2011 Ilievski F, Mani M, Whitesides GM, Brenner MP. Self-assembly of magnetically interacting cubes by a turbulent fluid flow. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 83: 017301. PMID 21405794 DOI: 10.1103/Physreve.83.017301  0.566
2011 Hormoz S, Brenner MP. Design principles for self-assembly with short-range interactions Proceedings of the National Academy of Sciences of the United States of America. 108: 5193-5198. PMID 21383135 DOI: 10.1073/Pnas.1014094108  0.687
2011 Arkus N, Manoharan VN, Brenner MP. Deriving finite sphere packings Siam Journal On Discrete Mathematics. 25: 1860-1901. DOI: 10.1137/100784424  0.756
2011 Ilievski F, Mani M, Whitesides GM, Brenner MP. Self-assembly of magnetically interacting cubes by a turbulent fluid flow Physical Review E - Statistical, Nonlinear, and Soft Matter Physics. 83. DOI: 10.1103/PhysRevE.83.017301  0.496
2010 Colwell LJ, Brenner MP, Ribbeck K. Charge as a selection criterion for translocation through the nuclear pore complex. Plos Computational Biology. 6: e1000747. PMID 20421988 DOI: 10.1371/Journal.Pcbi.1000747  0.647
2010 Meng G, Arkus N, Brenner MP, Manoharan VN. The free-energy landscape of clusters of attractive hard spheres. Science (New York, N.Y.). 327: 560-3. PMID 20110500 DOI: 10.1126/Science.1181263  0.764
2010 Colwell LJ, Brenner MP, Ribbeck K. Charge as a selection criterion for translocation through the nuclear pore complex Plos Computational Biology. 6. DOI: 10.1371/journal.pcbi.1000747  0.606
2010 Meng G, Arkus N, Brenner MP, Manoharan VN. The free-energy landscape of clusters of attractive hard spheres Science. 327: 560-563. DOI: 10.1126/science.1181263  0.757
2010 van Hoeve W, Gekle S, Snoeijer JH, Versluis M, Brenner MP, Lohse D. Breakup of diminutive Rayleigh jets Physics of Fluids. 22. DOI: 10.1063/1.3524533  0.483
2010 Mani M, Mandre S, Brenner MP. Events before droplet splashing on a solid surface Journal of Fluid Mechanics. 647: 163-185. DOI: 10.1017/S0022112009993594  0.578
2009 Arkus N, Manoharan VN, Brenner MP. Minimal energy clusters of hard spheres with short range attractions. Physical Review Letters. 103: 118303. PMID 19792406 DOI: 10.1103/Physrevlett.103.118303  0.761
2009 Mandre S, Mani M, Brenner MP. Precursors to splashing of liquid droplets on a solid surface. Physical Review Letters. 102: 134502. PMID 19392358 DOI: 10.1103/Physrevlett.102.134502  0.559
2009 Colwell LJ, Brenner MP. Action potential initiation in the Hodgkin-Huxley model Plos Computational Biology. 5. PMID 19148265 DOI: 10.1371/Journal.Pcbi.1000265  0.655
2009 Arkus N, Manoharan VN, Brenner MP. Minimal energy clusters of hard spheres with short range attractions Physical Review Letters. 103. DOI: 10.1103/PhysRevLett.103.118303  0.758
2009 Mandre S, Mani M, Brenner MP. Precursors to splashing of liquid droplets on a solid surface Physical Review Letters. 102. DOI: 10.1103/PhysRevLett.102.134502  0.483
2008 Brenner MP, Lohse D. Dynamic equilibrium mechanism for surface nanobubble stabilization. Physical Review Letters. 101: 214505. PMID 19113416 DOI: 10.1103/Physrevlett.101.214505  0.458
2008 Brenner MP, Lohse D. Dynamic equilibrium mechanism for surface nanobubble stabilization Physical Review Letters. 101. DOI: 10.1103/PhysRevLett.101.214505  0.36
2008 Roper M, Squires TM, Brenner MP. Symmetry unbreaking in the shapes of perfect projectiles Physics of Fluids. 20. DOI: 10.1063/1.2982500  0.581
2007 Alben S, Brenner MP. Self-assembly of flat sheets into closed surfaces. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 75: 056113. PMID 17677139 DOI: 10.1103/Physreve.75.056113  0.301
2007 Paruchuri S, Brenner MP. Splitting of a liquid jet. Physical Review Letters. 98: 134502. PMID 17501205 DOI: 10.1103/Physrevlett.98.134502  0.645
2007 Paruchuri S, Brenner MP. Splitting of a liquid jet Physical Review Letters. 98. DOI: 10.1103/PhysRevLett.98.134502  0.599
2006 Schnall-Levin M, Lauga E, Brenner MP. Self-assembly of spherical particles on an evaporating sessile droplet. Langmuir : the Acs Journal of Surfaces and Colloids. 22: 4547-51. PMID 16649762 DOI: 10.1021/La052921Z  0.554
2006 Schnall-Levin M, Lauga E, Brenner MP. Self-assembly of spherical particles on an evaporating sessile droplet Langmuir. 22: 4547-4551. DOI: 10.1021/la052921z  0.469
2005 Chen HH, Urquidez OA, Ichim S, Rodriquez LH, Brenner MP, Aziz MJ. Shocks in ion sputtering sharpen steep surface features. Science (New York, N.Y.). 310: 294-7. PMID 16224017 DOI: 10.1126/Science.1117219  0.486
2004 Lauga E, Brenner MP. Evaporation-driven assembly of colloidal particles Physical Review Letters. 93. PMID 15601211 DOI: 10.1103/Physrevlett.93.238301  0.539
2004 Lauga E, Brenner MP. Dynamic mechanisms for apparent slip on hydrophobic surfaces. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 70: 026311. PMID 15447592 DOI: 10.1103/Physreve.70.026311  0.554
2004 Chen HH, Brenner MP. The optimal faucet. Physical Review Letters. 92: 166106. PMID 15169248 DOI: 10.1103/Physrevlett.92.166106  0.482
2004 Chen HH, Brenner MP. The optimal faucet Physical Review Letters. 92: 166106-1. DOI: 10.1103/PhysRevLett.92.166106  0.32
2004 Lauga E, Brenner MP. Dynamic mechanisms for apparent slip on hydrophobic surfaces Physical Review E - Statistical, Nonlinear, and Soft Matter Physics. 70: 026311-1-026311-7. DOI: 10.1103/PhysRevE.70.026311  0.462
2003 Brenner MP, Paruchuri S. Thermal bending of liquid sheets and jets Physics of Fluids. 15: 3568-3571. DOI: 10.1063/1.1609198  0.652
2002 Voth GA, Bigger B, Buckley MR, Losert W, Brenner MP, Stone HA, Gollub JP. Ordered clusters and dynamical states of particles in a vibrated fluid. Physical Review Letters. 88: 234301. PMID 12059365 DOI: 10.1103/Physrevlett.88.234301  0.474
2002 Brenner MP, Hilgenfeldt S, Lohse D. Single-bubble sonoluminescence Reviews of Modern Physics. 74: 425-484. DOI: 10.1103/Revmodphys.74.425  0.45
2001 Betterton MD, Brenner MP. Collapsing bacterial cylinders. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 64: 061904. PMID 11736207 DOI: 10.1103/Physreve.64.061904  0.634
2001 Hohman MM, Shin M, Rutledge G, Brenner MP. Electrospinning and electrically forced jets. II. Applications Physics of Fluids. 13: 2221-2236. DOI: 10.1063/1.1384013  0.66
2001 Hohman MM, Shin M, Rutledge G, Brenner MP. Electrospinning and electrically forced jets. I. Stability theory Physics of Fluids. 13: 2201-2220. DOI: 10.1063/1.1383791  0.662
2001 Shin YM, Hohman MM, Brenner MP, Rutledge GC. Electrospinning: A whipping fluid jet generates submicron polymer fibers Applied Physics Letters. 78: 1149-1151. DOI: 10.1063/1.1345798  0.643
2001 Shin YM, Hohman MM, Brenner MP, Rutledge GC. Experimental characterization of electrospinning: The electrically forced jet and instabilities Polymer. 42: 9955-9967. DOI: 10.1016/S0032-3861(01)00540-7  0.65
2001 Betterton MD, Brenner MP. Collapsing bacterial cylinders Physical Review E - Statistical, Nonlinear, and Soft Matter Physics. 64: 061904/1-061904/15.  0.565
2000 Squires TM, Brenner MP. Like-charge attraction and hydrodynamic interaction Physical Review Letters. 85: 4976-9. PMID 11102165 DOI: 10.1103/Physrevlett.85.4976  0.583
2000 Dufresne ER, Squires TM, Brenner MP, Grier DG. Hydrodynamic coupling of two brownian spheres to a planar surface. Physical Review Letters. 85: 3317-20. PMID 11019330 DOI: 10.1103/Physrevlett.85.3317  0.587
2000 Brenner MP. Fluid mechanics. Jets from a singular surface Nature. 403: 377-8. PMID 10667775 DOI: 10.1038/35000330  0.303
2000 Brenner MP, Stone HA. Modern Classical Physics Through the Work of G. I. Taylor Physics Today. 53: 30-35. DOI: 10.1063/1.883100  0.44
2000 Taketomi S, Brenner MP, Stone HA. Surface Instability Spikes Physics Today. 53: 14-14. DOI: 10.1063/1.1341906  0.41
1999 Betterton MD, Brenner MP. Electrostatic edge instability of lipid membranes Physical Review Letters. 82: 1598-1601. DOI: 10.1103/Physrevlett.82.1598  0.606
1999 Stone HA, Lister JR, Brenner MP. Drops with conical ends in electric and magnetic fields Proceedings of the Royal Society a: Mathematical, Physical and Engineering Sciences. 455: 329-347. DOI: 10.1098/Rspa.1999.0316  0.427
1999 Brenner MP, Constantin P, Kadanoff LP, Schenkel A, Venkataramani SC. Diffusion, attraction and collapse Nonlinearity. 12: 1071-1098. DOI: 10.1088/0951-7715/12/4/320  0.537
1999 Brenner MP. Screening mechanisms in sedimentation Physics of Fluids. 11: 754-772. DOI: 10.1063/1.869948  0.305
1998 Brenner MP, Hilgenfeldt S, Lohse D. Predictions for stable sonoluminescence in nonaqueous liquids The Journal of the Acoustical Society of America. 103: 3048-3048. DOI: 10.1121/1.422631  0.462
1998 Brenner MP, Dupont TF, Hilgenfeldt S, Lohse D. Brenneret al.Reply: Physical Review Letters. 80: 3668-3669. DOI: 10.1103/Physrevlett.80.3668  0.38
1998 Koehler S, Stone H, Brenner M, Eggers JG. Dynamics of foam drainage Physical Review E. 58: 2097-2106. DOI: 10.1103/Physreve.58.2097  0.46
1998 Brenner MP, Witelski TP. On spherically symmetric gravitational collapse Journal of Statistical Physics. 93: 863-899. DOI: 10.1023/B:Joss.0000033167.19114.B8  0.303
1998 Hilgenfeldt S, Brenner MP, Grossmann S, Lohse D. Analysis of Rayleigh-Plesset dynamics for sonoluminescing bubbles Journal of Fluid Mechanics. 365: 171-204. DOI: 10.1017/S0022112098001207  0.489
1997 Lohse D, Brenner MP, Dupont TF, Hilgenfeldt S, Johnston B. Sonoluminescing air bubbles rectify argon Physical Review Letters. 78: 1359-1366. DOI: 10.1103/Physrevlett.78.1359  0.443
1997 Hilgenfeldt S, Lohse D, Brenner MP. Erratum: “Phase diagrams for sonoluminescing bubbles” [Phys. Fluids 8, 2808 (1996)] Physics of Fluids. 9: 2462-2462. DOI: 10.1063/1.869523  0.429
1997 Brenner MP, Eggers J, Joseph K, Nagel SR, Shi XD. Breakdown of scaling in droplet fission at high Reynolds number Physics of Fluids. 9: 1573-1590. DOI: 10.1063/1.869279  0.333
1996 Brenner MP, Hilgenfeldt S, Lohse D, Rosales RR. Acoustic Energy Storage in Single Bubble Sonoluminescence. Physical Review Letters. 77: 3467-3470. PMID 10062227 DOI: 10.1103/Physrevlett.77.3467  0.441
1996 Brenner MP, Lohse D, Oxtoby D, Dupont TF. Mechanisms for stable single bubble sonoluminescence. Physical Review Letters. 76: 1158-1161. PMID 10061648 DOI: 10.1103/Physrevlett.76.1158  0.446
1996 Hilgenfeldt S, Lohse D, Brenner MP. Phase diagrams for sonoluminescing bubbles Physics of Fluids. 8: 2808-2826. DOI: 10.1063/1.869131  0.454
1996 Brenner MP, Lister JR, Stone HA. Pinching threads, singularities and the number 0.0304... Physics of Fluids. 8: 2827-2836. DOI: 10.1063/1.869086  0.429
1996 Stone HA, Brenner MP. Note on the capillary thread instability for fluids of equal viscosities Journal of Fluid Mechanics. 318: 373-374. DOI: 10.1017/S002211209600715X  0.429
1995 Brenner MP, Lohse D, Dupont TF. Bubble shape oscillations and the onset of sonoluminescence. Physical Review Letters. 75: 954-957. PMID 10060160 DOI: 10.1103/Physrevlett.75.954  0.462
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