☰

Jeffrey Lawrence, PhD - Publications

Affiliations: 
Biological Sciences University of Pittsburgh, Pittsburgh, PA, United States 
Tree Info Similar researchers PubMed Report error

48 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2018 Hendrickson HL, Barbeau D, Ceschin R, Lawrence JG. Chromosome architecture constrains horizontal gene transfer in bacteria. Plos Genetics. 14: e1007421. PMID 29813058 DOI: 10.1371/journal.pgen.1007421  0.725
2016 Atzinger A, Butela K, Lawrence JG. The O-antigen Mediates Differential Survival of Salmonella Against Communities of Natural Predators. Microbiology (Reading, England). PMID 26888189 DOI: 10.1099/Mic.0.000259  0.731
2015 Pope WH, Bowman CA, Russell DA, Jacobs-Sera D, Asai DJ, Cresawn SG, Jacobs WR, Hendrix RW, Lawrence JG, Hatfull GF. Whole genome comparison of a large collection of mycobacteriophages reveals a continuum of phage genetic diversity. Elife. 4: e06416. PMID 25919952 DOI: 10.7554/Elife.06416  0.309
2014 Pope WH, Jacobs-Sera D, Russell DA, Rubin DH, Kajee A, Msibi ZN, Larsen MH, Jacobs WR, Lawrence JG, Hendrix RW, Hatfull GF. Genomics and proteomics of mycobacteriophage patience, an accidental tourist in the Mycobacterium neighborhood. Mbio. 5: e02145. PMID 25467442 DOI: 10.1128/Mbio.02145-14  0.304
2013 Lawrence JG, Butela K, Atzinger A. A likelihood approach to classifying fluorescent events collected by multicolor flow cytometry. Journal of Microbiological Methods. 94: 1-12. PMID 23588324 DOI: 10.1016/J.Mimet.2013.04.001  0.703
2012 Butela K, Lawrence JG. Genetic manipulation of pathogenicity loci in non-Typhimurium Salmonella. Journal of Microbiological Methods. 91: 477-82. PMID 23041268 DOI: 10.1016/J.Mimet.2012.09.013  0.734
2012 Retchless AC, Lawrence JG. Ecological adaptation in bacteria: speciation driven by codon selection. Molecular Biology and Evolution. 29: 3669-83. PMID 22740635 DOI: 10.1093/Molbev/Mss171  0.7
2012 Azad RK, Lawrence JG. Detecting laterally transferred genes. Methods in Molecular Biology (Clifton, N.J.). 855: 281-308. PMID 22407713 DOI: 10.1007/978-1-61779-582-4_10  0.318
2011 Retchless AC, Lawrence JG. Quantification of codon selection for comparative bacterial genomics. Bmc Genomics. 12: 374. PMID 21787402 DOI: 10.1186/1471-2164-12-374  0.685
2010 Retchless AC, Lawrence JG. Phylogenetic incongruence arising from fragmented speciation in enteric bacteria. Proceedings of the National Academy of Sciences of the United States of America. 107: 11453-8. PMID 20534528 DOI: 10.1073/Pnas.1001291107  0.7
2010 Hatfull GF, Jacobs-Sera D, Lawrence JG, Pope WH, Russell DA, Ko CC, Weber RJ, Patel MC, Germane KL, Edgar RH, Hoyte NN, Bowman CA, Tantoco AT, Paladin EC, Myers MS, et al. Comparative genomic analysis of 60 Mycobacteriophage genomes: genome clustering, gene acquisition, and gene size. Journal of Molecular Biology. 397: 119-43. PMID 20064525 DOI: 10.1016/J.Jmb.2010.01.011  0.3
2010 Lawrence JG, Retchless AC. The myth of bacterial species and speciation Biology and Philosophy. 25: 569-588. DOI: 10.1007/S10539-010-9215-5  0.684
2009 Arvey AJ, Azad RK, Raval A, Lawrence JG. Detection of genomic islands via segmental genome heterogeneity. Nucleic Acids Research. 37: 5255-66. PMID 19589805 DOI: 10.1093/nar/gkp576  0.321
2009 Lawrence JG, Retchless AC. The interplay of homologous recombination and horizontal gene transfer in bacterial speciation. Methods in Molecular Biology (Clifton, N.J.). 532: 29-53. PMID 19271178 DOI: 10.1007/978-1-60327-853-9_3  0.68
2007 Retchless AC, Lawrence JG. Temporal fragmentation of speciation in bacteria. Science (New York, N.Y.). 317: 1093-6. PMID 17717188 DOI: 10.1126/Science.1144876  0.693
2007 Azad RK, Lawrence JG. Detecting laterally transferred genes: use of entropic clustering methods and genome position. Nucleic Acids Research. 35: 4629-39. PMID 17591616 DOI: 10.1093/nar/gkm204  0.31
2007 Weigele PR, Pope WH, Pedulla ML, Houtz JM, Smith AL, Conway JF, King J, Hatfull GF, Lawrence JG, Hendrix RW. Genomic and structural analysis of Syn9, a cyanophage infecting marine Prochlorococcus and Synechococcus. Environmental Microbiology. 9: 1675-95. PMID 17564603 DOI: 10.1111/J.1462-2920.2007.01285.X  0.355
2007 Wildschutte H, Lawrence JG. Differential Salmonella survival against communities of intestinal amoebae. Microbiology (Reading, England). 153: 1781-9. PMID 17526835 DOI: 10.1099/mic.0.2006/003616-0  0.727
2007 Hendrickson H, Lawrence JG. Mutational bias suggests that replication termination occurs near the dif site, not at Ter sites. Molecular Microbiology. 64: 42-56. PMID 17376071 DOI: 10.1111/j.1365-2958.2007.05596.x  0.685
2006 Comas I, Moya A, Azad RK, Lawrence JG, Gonzalez-Candelas F. The evolutionary origin of Xanthomonadales genomes and the nature of the horizontal gene transfer process. Molecular Biology and Evolution. 23: 2049-57. PMID 16882701 DOI: 10.1093/Molbev/Msl075  0.321
2006 Hendrickson H, Lawrence JG. Selection for chromosome architecture in bacteria. Journal of Molecular Evolution. 62: 615-29. PMID 16612541 DOI: 10.1007/s00239-005-0192-2  0.715
2005 Azad RK, Lawrence JG. Use of artificial genomes in assessing methods for atypical gene detection. Plos Computational Biology. 1: e56. PMID 16292353 DOI: 10.1371/journal.pcbi.0010056  0.312
2005 Lawrence JG. Common themes in the genome strategies of pathogens. Current Opinion in Genetics & Development. 15: 584-8. PMID 16188434 DOI: 10.1016/j.gde.2005.09.007  0.336
2005 Lawrence JG, Hendrickson H. Genome evolution in bacteria: order beneath chaos. Current Opinion in Microbiology. 8: 572-8. PMID 16122972 DOI: 10.1016/j.mib.2005.08.005  0.72
2004 Wildschutte H, Wolfe DM, Tamewitz A, Lawrence JG. Protozoan predation, diversifying selection, and the evolution of antigenic diversity in Salmonella. Proceedings of the National Academy of Sciences of the United States of America. 101: 10644-9. PMID 15247413 DOI: 10.1073/pnas.0404028101  0.732
2003 Lawrence JG, Hendrickson H. Lateral gene transfer: when will adolescence end? Molecular Microbiology. 50: 739-49. PMID 14617137 DOI: 10.1046/j.1365-2958.2003.03778.x  0.71
2003 Pedulla ML, Ford ME, Houtz JM, Karthikeyan T, Wadsworth C, Lewis JA, Jacobs-Sera D, Falbo J, Gross J, Pannunzio NR, Brucker W, Kumar V, Kandasamy J, Keenan L, Bardarov S, ... ... Lawrence JG, et al. Origins of highly mosaic mycobacteriophage genomes. Cell. 113: 171-82. PMID 12705866 DOI: 10.1016/S0092-8674(03)00233-2  0.358
2003 Lawrence J. When ELFs are ORFs, but don't act like them. Trends in Genetics : Tig. 19: 131-2. PMID 12615005 DOI: 10.1016/S0168-9525(02)00038-0  0.352
2002 Gogarten JP, Doolittle WF, Lawrence JG. Prokaryotic evolution in light of gene transfer. Molecular Biology and Evolution. 19: 2226-38. PMID 12446813 DOI: 10.1093/Oxfordjournals.Molbev.A004046  0.357
2002 Lawrence JG. Gene transfer in bacteria: speciation without species? Theoretical Population Biology. 61: 449-60. PMID 12167364 DOI: 10.1006/tpbi.2002.1587  0.394
2001 Lawrence JG. Catalyzing bacterial speciation: Correlating lateral transfer with genetic headroom Systematic Biology. 50: 479-496. PMID 12116648  0.341
2000 Hendrix RW, Lawrence JG, Hatfull GF, Casjens S. The origins and ongoing evolution of viruses Trends in Microbiology. 8: 504-508. PMID 11121760 DOI: 10.1016/S0966-842X(00)01863-1  0.31
2000 Ochman H, Lawrence JG, Groisman EA. Lateral gene transfer and the nature of bacterial innovation. Nature. 405: 299-304. PMID 10830951 DOI: 10.1038/35012500  0.379
1999 Lawrence J. Selfish operons: The evolutionary impact of gene clustering in prokaryotes and eukaryotes Current Opinion in Genetics and Development. 9: 642-648. PMID 10607610 DOI: 10.1016/S0959-437X(99)00025-8  0.417
1999 Lawrence JG. Gene transfer, speciation, and the evolution of bacterial genomes Current Opinion in Microbiology. 2: 519-523. PMID 10508729 DOI: 10.1016/S1369-5274(99)00010-7  0.339
1998 Lawrence JG, Ochman H. Molecular archaeology of the Escherichia coli genome. Proceedings of the National Academy of Sciences of the United States of America. 95: 9413-7. PMID 9689094 DOI: 10.1073/Pnas.95.16.9413  0.361
1997 Lawrence JG, Ochman H. Amelioration of bacterial genomes: rates of change and exchange. Journal of Molecular Evolution. 44: 383-97. PMID 9089078 DOI: 10.1007/Pl00006158  0.348
1996 Lawrence JG, Roth JR. Selfish operons: Horizontal transfer may drive the evolution of gene clusters Genetics. 143: 1843-1860. PMID 8844169  0.315
1996 Lawrence JG, Roth JR. Evolution of coenzyme B12 synthesis among enteric bacteria: Evidence for loss and reacquisition of a multigene complex Genetics. 142: 11-24. PMID 8770581  0.367
1995 Lawrence JG, Roth JR. The cobalamin (coenzyme B12) biosynthetic genes of Escherichia coli Journal of Bacteriology. 177: 6371-6380. PMID 7592411 DOI: 10.1128/Jb.177.22.6371-6380.1995  0.316
1993 Lawrence JG, Hartl DL, Ochman H. Sequencing products of polymerase chain reaction. Methods in Enzymology. 218: 26-35. PMID 8510537 DOI: 10.1016/0076-6879(93)18005-W  0.433
1992 Lawrence JG, Hartl DL. Inference of horizontal genetic transfer from molecular data: an approach using the bootstrap. Genetics. 131: 753-60. PMID 1628816  0.492
1992 Hartl DL, Lozovskaya ER, Lawrence JG. Nonautonomous transposable elements in prokaryotes and eukaryotes. Genetica. 86: 47-53. PMID 1334917 DOI: 10.1007/Bf00133710  0.413
1992 Lawrence JG, Ochman H, Hartl DL. The evolution of insertion sequences within enteric bacteria. Genetics. 131: 9-20. PMID 1317318  0.547
1991 Lawrence JG, Ochman H, Hartl DL. Molecular and evolutionary relationships among enteric bacteria. Journal of General Microbiology. 137: 1911-21. PMID 1955870 DOI: 10.1099/00221287-137-8-1911  0.525
1991 Lawrence JG, Hartl DL, Ochman H. Molecular considerations in the evolution of bacterial genes. Journal of Molecular Evolution. 33: 241-50. PMID 1757995 DOI: 10.1007/Bf02100675  0.525
1991 Lawrence JG, Hartl DL. Unusual codon bias occurring within insertion sequences in Escherichia coli. Genetica. 84: 23-9. PMID 1651881 DOI: 10.1007/Bf00123981  0.484
1989 Lawrence JG, Dykhuizen DE, DuBose RF, Hartl DL. Phylogenetic analysis using insertion sequence fingerprinting in Escherichia coli. Molecular Biology and Evolution. 6: 1-14. PMID 2564160 DOI: 10.1093/Oxfordjournals.Molbev.A040531  0.67
Show low-probability matches.