| Year |
Citation |
Score |
| 2024 |
Chapman EA, Li BH, Krichel B, Chan HJ, Buck KM, Roberts DS, Ge Y. Native Top-Down Mass Spectrometry for Characterizing Sarcomeric Proteins Directly from Cardiac Tissue Lysate. Journal of the American Society For Mass Spectrometry. PMID 38422011 DOI: 10.1021/jasms.3c00430 |
0.413 |
|
| 2024 |
Rogers HT, Melby JA, Ehlers LE, Fischer MS, Larson EJ, Gao Z, Rossler KJ, Wang D, Alpert AJ, Ge Y. Small-Scale Serial Size Exclusion Chromatography (sSEC) for High Sensitivity Top-Down Proteomics of Large Proteoforms. Analytical Chemistry. PMID 38315630 DOI: 10.1021/acs.analchem.3c05733 |
0.374 |
|
| 2023 |
Brown KA, Morris RK, Eckhardt SJ, Ge Y, Gellman SH. Phosphorylation Sites of the Gastric Inhibitory Polypeptide Receptor (GIPR) Revealed by Trapped-Ion-Mobility Spectrometry Coupled to Time-of-Flight Mass Spectrometry (TIMS-TOF MS). Journal of the American Chemical Society. 145: 28030-28037. PMID 38091482 DOI: 10.1021/jacs.3c09078 |
0.32 |
|
| 2023 |
Pergande MR, Osterbauer KJ, Buck KM, Roberts DS, Wood NN, Balasubramanian P, Mann MW, Rossler KJ, Diffee GM, Colman RJ, Anderson RM, Ge Y. Mass Spectrometry-Based Multiomics Identifies Metabolic Signatures of Sarcopenia in Rhesus Monkey Skeletal Muscle. Journal of Proteome Research. PMID 37991985 DOI: 10.1021/acs.jproteome.3c00474 |
0.705 |
|
| 2023 |
Wancewicz B, Pergande MR, Zhu Y, Gao Z, Shi Z, Plouff K, Ge Y. Comprehensive Metabolomic Analysis of Human Heart Tissue Enabled by Parallel Metabolite Extraction and High-Resolution Mass Spectrometry. Biorxiv : the Preprint Server For Biology. PMID 37745334 DOI: 10.1101/2023.09.15.558013 |
0.728 |
|
| 2023 |
West KHJ, Ma SV, Pensinger DA, Tucholski T, Tiambeng TN, Eisenbraun EL, Yehuda A, Hayouka Z, Ge Y, Sauer JD, Blackwell HE. Characterization of an Autoinducing Peptide Signal Reveals Highly Efficacious Synthetic Inhibitors and Activators of Quorum Sensing and Biofilm Formation in . Biochemistry. PMID 37699554 DOI: 10.1021/acs.biochem.3c00373 |
0.701 |
|
| 2023 |
Lermyte F, Habeck T, Brown K, Des Soye B, Lantz C, Zhou M, Alam N, Hossain MA, Jung W, Keener J, Volny M, Wilson J, Ying Y, Agar J, Danis P, ... Ge Y, et al. Top-down mass spectrometry of native proteoforms and their complexes: A community study. Research Square. PMID 37674709 DOI: 10.21203/rs.3.rs-3228472/v1 |
0.645 |
|
| 2023 |
Rogers HT, Roberts DS, Larson EJ, Melby JA, Rossler KJ, Carr AV, Brown KA, Ge Y. Comprehensive Characterization of Endogenous Phospholamban Proteoforms Enabled by Photocleavable Surfactant and Top-down Proteomics. Analytical Chemistry. PMID 37607050 DOI: 10.1021/acs.analchem.3c01618 |
0.436 |
|
| 2023 |
Pergande MR, Osterbauer KJ, Buck KM, Roberts DS, Wood NN, Balasubramanian P, Mann MW, Rossler K, Diffee GM, Colman RJ, Anderson RM, Ge Y. Mass spectrometry-based multi-omics identifies metabolic signatures of sarcopenia in rhesus monkey skeletal muscle. Biorxiv : the Preprint Server For Biology. PMID 37577600 DOI: 10.1101/2023.07.31.551315 |
0.707 |
|
| 2023 |
Bayne EF, Rossler KJ, Gregorich ZR, Aballo TJ, Roberts DS, Chapman EA, Guo W, Palecek SP, Ralphe JC, Kamp TJ, Ge Y. Top-down proteomics of myosin light chain isoforms define chamber-specific expression in the human heart. Journal of Molecular and Cellular Cardiology. 181: 89-97. PMID 37327991 DOI: 10.1016/j.yjmcc.2023.06.003 |
0.729 |
|
| 2023 |
Larson EJ, Pergande MR, Moss ME, Rossler KJ, Wenger RK, Krichel B, Josyer H, Melby JA, Roberts DS, Pike K, Shi Z, Chan HJ, Knight B, Rogers HT, Brown KA, ... ... Ge Y, et al. MASH Native: A Unified Solution for Native Top-Down Proteomics Data Processing. Bioinformatics (Oxford, England). PMID 37294807 DOI: 10.1093/bioinformatics/btad359 |
0.712 |
|
| 2023 |
Melby JA, Brown KA, Gregorich ZR, Roberts DS, Chapman EA, Ehlers LE, Gao Z, Larson EJ, Jin Y, Lopez JR, Hartung J, Zhu Y, McIlwain SJ, Wang D, Guo W, ... ... Ge Y, et al. High sensitivity top-down proteomics captures single muscle cell heterogeneity in large proteoforms. Proceedings of the National Academy of Sciences of the United States of America. 120: e2222081120. PMID 37126723 DOI: 10.1073/pnas.2222081120 |
0.791 |
|
| 2023 |
Rogers HT, Roberts DS, Larson EJ, Melby JA, Rossler KJ, Carr AV, Brown KA, Ge Y. Comprehensive Characterization of Endogenous Phospholamban Proteoforms Enabled by Photocleavable Surfactant and Top-down Proteomics. Biorxiv : the Preprint Server For Biology. PMID 37090578 DOI: 10.1101/2023.04.12.536120 |
0.42 |
|
| 2023 |
Chapman EA, Aballo TJ, Melby JA, Zhou T, Price SJ, Rossler KJ, Lei I, Tang PC, Ge Y. Defining the Sarcomeric Proteoform Landscape in Ischemic Cardiomyopathy by Top-Down Proteomics. Journal of Proteome Research. PMID 36800490 DOI: 10.1021/acs.jproteome.2c00729 |
0.434 |
|
| 2023 |
Bayne EF, Rossler KJ, Gregorich ZR, Aballo TJ, Roberts DS, Chapman EA, Guo W, Ralphe JC, Kamp TJ, Ge Y. Top-down Proteomics of Myosin Light Chain Isoforms Define Chamber-Specific Expression in the Human Heart. Biorxiv : the Preprint Server For Biology. PMID 36747670 DOI: 10.1101/2023.01.26.525767 |
0.732 |
|
| 2023 |
Larson EJ, Pergande MR, Moss ME, Rossler KJ, Wenger RK, Krichel B, Josyer H, Melby JA, Roberts DS, Pike K, Shi Z, Chan HJ, Knight B, Rogers HT, Brown KA, ... ... Ge Y, et al. MASH Native: A Unified Solution for Native Top-Down Proteomics Data Processing. Biorxiv : the Preprint Server For Biology. PMID 36711733 DOI: 10.1101/2023.01.02.522513 |
0.691 |
|
| 2023 |
Brown KA, Gugger MK, Yu Z, Moreno D, Jin S, Ge Y. Nonionic, Cleavable Surfactant for Top-Down Proteomics. Analytical Chemistry. PMID 36608324 DOI: 10.1021/acs.analchem.2c03916 |
0.401 |
|
| 2022 |
Sun M, Jin Y, Zhang Y, Gregorich ZR, Ren J, Ge Y, Guo W. SR Protein Kinases Regulate the Splicing of Cardiomyopathy-Relevant Genes via Phosphorylation of the RSRSP Stretch in RBM20. Genes. 13. PMID 36140694 DOI: 10.3390/genes13091526 |
0.791 |
|
| 2022 |
Larson EJ, Gregorich ZR, Zhang Y, Li BH, Aballo TJ, Melby JA, Ge Y, Guo W. ablation is associated with changes in the expression of titin-interacting and metabolic proteins. Molecular Omics. PMID 35762193 DOI: 10.1039/d2mo00115b |
0.709 |
|
| 2022 |
Tiambeng TN, Wu Z, Melby JA, Ge Y. Size Exclusion Chromatography Strategies and MASH Explorer for Large Proteoform Characterization. Methods in Molecular Biology (Clifton, N.J.). 2500: 15-30. PMID 35657584 DOI: 10.1007/978-1-0716-2325-1_3 |
0.326 |
|
| 2022 |
Buck KM, Roberts DS, Aballo TJ, Inman DR, Jin S, Ponik S, Brown KA, Ge Y. One-Pot Exosome Proteomics Enabled by a Photocleavable Surfactant. Analytical Chemistry. PMID 35543580 DOI: 10.1021/acs.analchem.2c01252 |
0.364 |
|
| 2022 |
Zhang Y, Wang C, Sun M, Jin Y, Braz CU, Khatib H, Hacker TA, Liss M, Gotthardt M, Granzier H, Ge Y, Guo W. RBM20 phosphorylation and its role in nucleocytoplasmic transport and cardiac pathogenesis. Faseb Journal : Official Publication of the Federation of American Societies For Experimental Biology. 36: e22302. PMID 35394688 DOI: 10.1096/fj.202101811RR |
0.693 |
|
| 2021 |
Smith LM, Agar JN, Chamot-Rooke J, Danis PO, Ge Y, Loo JA, Paša-Tolić L, Tsybin YO, Kelleher NL. The Human Proteoform Project: Defining the human proteome. Science Advances. 7: eabk0734. PMID 34767442 DOI: 10.1126/sciadv.abk0734 |
0.526 |
|
| 2021 |
Roberts DS, Mann M, Melby JA, Larson EJ, Zhu Y, Brasier AR, Jin S, Ge Y. Structural O-Glycoform Heterogeneity of the SARS-CoV-2 Spike Protein Receptor-Binding Domain Revealed by Top-Down Mass Spectrometry. Journal of the American Chemical Society. PMID 34328324 DOI: 10.1021/jacs.1c02713 |
0.302 |
|
| 2021 |
Larson EJ, Roberts DS, Melby JA, Buck KM, Zhu Y, Zhou S, Han L, Zhang Q, Ge Y. High-Throughput Multi-attribute Analysis of Antibody-Drug Conjugates Enabled by Trapped Ion Mobility Spectrometry and Top-Down Mass Spectrometry. Analytical Chemistry. PMID 34258999 DOI: 10.1021/acs.analchem.1c00150 |
0.313 |
|
| 2021 |
Aballo TJ, Roberts DS, Melby JA, Buck KM, Brown KA, Ge Y. Ultrafast and Reproducible Proteomics from Small Amounts of Heart Tissue Enabled by Azo and timsTOF Pro. Journal of Proteome Research. PMID 34236868 DOI: 10.1021/acs.jproteome.1c00446 |
0.429 |
|
| 2021 |
Melby JA, Roberts DS, Larson EJ, Brown KA, Bayne EF, Jin S, Ge Y. Novel Strategies to Address the Challenges in Top-Down Proteomics. Journal of the American Society For Mass Spectrometry. PMID 33983025 DOI: 10.1021/jasms.1c00099 |
0.368 |
|
| 2021 |
Kurgan KW, Chen B, Brown KA, Falco Cobra P, Ye X, Ge Y, Gellman SH. Stable Picodisc Assemblies from Saposin Proteins and Branched Detergents. Biochemistry. PMID 33755420 DOI: 10.1021/acs.biochem.0c00924 |
0.745 |
|
| 2021 |
Melby JA, de Lange WJ, Zhang J, Roberts DS, Mitchell SD, Tucholski T, Kim G, Kyrvasilis A, McIlwain SJ, Kamp TJ, Ralphe JC, Ge Y. Functionally Integrated Top-Down Proteomics for Standardized Assessment of Human Induced Pluripotent Stem Cell-Derived Engineered Cardiac Tissues. Journal of Proteome Research. PMID 33395532 DOI: 10.1021/acs.jproteome.0c00830 |
0.74 |
|
| 2020 |
Zhou M, Lantz C, Brown KA, Ge Y, Paša-Tolić L, Loo JA, Lermyte F. Higher-order structural characterisation of native proteins and complexes by top-down mass spectrometry. Chemical Science. 11: 12918-12936. PMID 34094482 DOI: 10.1039/d0sc04392c |
0.542 |
|
| 2020 |
Brown KA, Melby JA, Roberts DS, Ge Y. Top-down Proteomics: Challenges, Innovations, and Applications in Basic and Clinical Research. Expert Review of Proteomics. PMID 33232185 DOI: 10.1080/14789450.2020.1855982 |
0.361 |
|
| 2020 |
Knott SJ, Brown KA, Josyer H, Carr A, Inman D, Jin S, Friedl A, Ponik SM, Ge Y. Photocleavable Surfactant-Enabled Extracellular Matrix Proteomics. Analytical Chemistry. PMID 33232116 DOI: 10.1021/acs.analchem.0c03104 |
0.399 |
|
| 2020 |
Brown KA, Tucholski T, Alpert AJ, Eken C, Wesemann L, Kyrvasilis A, Jin S, Ge Y. Top-Down Proteomics of Endogenous Membrane Proteins Enabled by Cloud Point Enrichment and Multidimensional Liquid Chromatography-Mass Spectrometry. Analytical Chemistry. PMID 33231430 DOI: 10.1021/acs.analchem.0c02533 |
0.785 |
|
| 2020 |
Styles MJ, Early SA, Tucholski T, West KHJ, Ge Y, Blackwell HE. Chemical Control of Quorum Sensing in : Identification of Small Molecule Modulators of SdiA and Mechanistic Characterization of a Covalent Inhibitor. Acs Infectious Diseases. PMID 33124430 DOI: 10.1021/acsinfecdis.0c00654 |
0.707 |
|
| 2020 |
Larson EJ, Zhu Y, Wu Z, Chen B, Zhang Z, Zhou S, Han L, Zhang Q, Ge Y. Rapid Analysis of Reduced Antibody Drug Conjugate by Online LC-MS/MS with Fourier Transform Ion Cyclotron Resonance Mass Spectrometry. Analytical Chemistry. PMID 33108180 DOI: 10.1021/acs.analchem.0c03152 |
0.762 |
|
| 2020 |
Zhu Y, Wancewicz B, Schaid M, Tiambeng TN, Wenger K, Jin Y, Heyman H, Thompson CJ, Barsch A, Cox ED, Davis DB, Brasier AR, Kimple M, Ge Y. Ultrahigh-Resolution Mass Spectrometry-Based Platform for Plasma Metabolomics Applied to Type 2 Diabetes Research. Journal of Proteome Research. PMID 33054244 DOI: 10.1021/acs.jproteome.0c00510 |
0.714 |
|
| 2020 |
Tucholski T, Cai W, Gregorich ZR, Bayne EF, Mitchell SD, McIlwain SJ, de Lange WJ, Wrobbel M, Karp H, Hite Z, Vikhorev PG, Marston SB, Lal S, Li A, Dos Remedios C, ... ... Ge Y, et al. Distinct hypertrophic cardiomyopathy genotypes result in convergent sarcomeric proteoform profiles revealed by top-down proteomics. Proceedings of the National Academy of Sciences of the United States of America. PMID 32968017 DOI: 10.1073/pnas.2006764117 |
0.804 |
|
| 2020 |
Tucholski T, Ge Y. Fourier-transform ion cyclotron resonance mass spectrometry for characterizing proteoforms. Mass Spectrometry Reviews. PMID 32894796 DOI: 10.1002/Mas.21653 |
0.801 |
|
| 2020 |
Kellie JF, Tran JC, Jian W, Jones BR, Mehl JT, Ge Y, Henion J, Bateman KP. Intact Protein Mass Spectrometry for Therapeutic Protein Quantitation, Pharmacokinetics and Biotransformation in Pre-Clinical and Clinical Studies: An Industry Perspective. Journal of the American Society For Mass Spectrometry. PMID 32869982 DOI: 10.1021/Jasms.0C00270 |
0.427 |
|
| 2020 |
Srzentić K, Fornelli L, Tsybin YO, Loo JA, Seckler H, Agar JN, Anderson LC, Bai DL, Beck A, Brodbelt JS, van der Burgt YEM, Chamot-Rooke J, Chatterjee S, Chen Y, Clarke DJ, ... ... Ge Y, et al. Interlaboratory Study for Characterizing Monoclonal Antibodies by Top-Down and Middle-Down Mass Spectrometry. Journal of the American Society For Mass Spectrometry. PMID 32812765 DOI: 10.1021/Jasms.0C00036 |
0.682 |
|
| 2020 |
Wu Z, Roberts DS, Melby JA, Wenger K, Wetzel M, Gu Y, Ramanathan SG, Bayne EF, Liu X, Sun R, Ong IM, McIlwain SJ, Ge Y. MASH Explorer: A Universal Software Environment for Top-Down Proteomics. Journal of Proteome Research. PMID 32786689 DOI: 10.1021/Acs.Jproteome.0C00469 |
0.399 |
|
| 2020 |
Tiambeng TN, Roberts DS, Brown KA, Zhu Y, Chen B, Wu Z, Mitchell SD, Guardado-Alvarez TM, Jin S, Ge Y. Nanoproteomics enables proteoform-resolved analysis of low-abundance proteins in human serum. Nature Communications. 11: 3903. PMID 32764543 DOI: 10.1038/S41467-020-17643-1 |
0.81 |
|
| 2020 |
Xu B, Li M, Wang Y, Zhao M, Morotti S, Shi Q, Wang Q, Barbagallo F, Teoh JP, Raghavender Reddy G, Bayne EF, Liu Y, Shen A, Puglisi JL, Ge Y, et al. GRK5 Controls SAP97-Dependent Cardiotoxic β1 Adrenergic Receptor-CaMKII Signaling in Heart Failureβ. Circulation Research. PMID 32507058 DOI: 10.1161/Circresaha.119.316319 |
0.317 |
|
| 2020 |
McIlwain SJ, Wu Z, Wetzel M, Belongia D, Jin Y, Wenger K, Ong IM, Ge Y. Enhancing Top-Down Proteomics Data Analysis by Combining Deconvolution Results through a Machine Learning Strategy. Journal of the American Society For Mass Spectrometry. PMID 32223200 DOI: 10.1021/Jasms.0C00035 |
0.71 |
|
| 2020 |
Brown K, Tucholski T, Eken C, Knott S, Zhu Y, Jin S, Ge Y. High-throughput Proteomics Enabled by a Photocleavable Surfactant. Angewandte Chemie (International Ed. in English). PMID 32097521 DOI: 10.1002/Anie.201915374 |
0.814 |
|
| 2020 |
Zhang F, Wyche TP, Zhu Y, Braun DR, Yan JX, Chanana S, Ge Y, Guzei IA, Chevrette MG, Currie CR, Thomas MG, Rajski SR, Bugni TS. MS-Derived Isotopic Fine Structure Reveals Forazoline A as a Thioketone-Containing Marine-Derived Natural Product. Organic Letters. PMID 32017574 DOI: 10.1021/Acs.Orglett.9B04535 |
0.306 |
|
| 2019 |
Lin Z, Wei L, Cai W, Zhu Y, Tucholski T, Mitchell SD, Guo W, Ford SP, Diffee GM, Ge Y. Simultaneous Quantification of Protein Expression and Modifications by Top-down Targeted Proteomics: A Case of the Sarcomeric Subproteome. Molecular & Cellular Proteomics : McP. 18: 594-605. PMID 33431132 DOI: 10.1074/mcp.TIR118.001086 |
0.837 |
|
| 2019 |
Wu Z, Jin Y, Chen B, Gugger MK, Wilkinson-Johnson CL, Tiambeng TN, Jin S, Ge Y. Comprehensive Characterization of the Recombinant Catalytic Subunit of cAMP-Dependent Protein Kinase by Top-Down Mass Spectrometry. Journal of the American Society For Mass Spectrometry. 30: 2561-2570. PMID 31944732 DOI: 10.1021/jasms.8b06294 |
0.317 |
|
| 2019 |
Jin Y, Diffee GM, Colman RJ, Anderson RM, Ge Y. Top-down Mass Spectrometry of Sarcomeric Protein Post-translational Modifications from Non-human Primate Skeletal Muscle. Journal of the American Society For Mass Spectrometry. 30: 2460-2469. PMID 31944707 DOI: 10.1021/jasms.8b06267 |
0.364 |
|
| 2019 |
Wu Z, Jin Y, Chen B, Gugger MK, Wilkinson-Johnson CL, Tiambeng TN, Jin S, Ge Y. Comprehensive Characterization of the Recombinant Catalytic Subunit of cAMP-Dependent Protein Kinase by Top-Down Mass Spectrometry. Journal of the American Society For Mass Spectrometry. PMID 31792770 DOI: 10.1007/S13361-019-02341-0 |
0.815 |
|
| 2019 |
Melby JA, Jin Y, Lin Z, Tucholski T, Wu Z, Gregorich ZR, Diffee GM, Ge Y. Top-Down Proteomics Reveals Myofilament Proteoform Heterogeneity among Various Rat Skeletal Muscle Tissues. Journal of Proteome Research. PMID 31647247 DOI: 10.1021/Acs.Jproteome.9B00623 |
0.812 |
|
| 2019 |
Tiambeng TN, Tucholski T, Wu Z, Zhu Y, Mitchell SD, Roberts DS, Jin Y, Ge Y. Analysis of cardiac troponin proteoforms by top-down mass spectrometry. Methods in Enzymology. 626: 347-374. PMID 31606082 DOI: 10.1016/Bs.Mie.2019.07.029 |
0.839 |
|
| 2019 |
Cai W, Zhang J, De Lange WJ, Gregorich ZR, Karp H, Farrell ET, Mitchell ST, Tucholski T, Lin Z, Biermann M, McIlwain S, Ralphe JC, Kamp TJ, Ge Y. Unbiased Proteomics Method to Assess the Maturation of Human Pluripotent Stem Cell-Derived Cardiomyocytes. Circulation Research. PMID 31573406 DOI: 10.1161/Circresaha.119.315305 |
0.794 |
|
| 2019 |
Smith LM, Thomas PM, Shortreed MR, Schaffer LV, Fellers RT, LeDuc RD, Tucholski T, Ge Y, Agar JN, Anderson LC, Chamot-Rooke J, Gault J, Loo JA, Paša-Tolić L, Robinson CV, et al. A five-level classification system for proteoform identifications. Nature Methods. PMID 31451767 DOI: 10.1038/S41592-019-0573-X |
0.812 |
|
| 2019 |
Chen B, Lin Z, Zhu Y, Jin Y, Larson E, Xu Q, Fu C, Zhang Z, Zhang Q, Pritts W, Ge Y. Middle-Down Multi-Attribute Analysis of Antibody-Drug Conjugates with Electron Transfer Dissociation. Analytical Chemistry. PMID 31442030 DOI: 10.1021/Acs.Analchem.9B02194 |
0.792 |
|
| 2019 |
Schaffer LV, Tucholski T, Shortreed MR, Ge Y, Smith LM. Intact-Mass Analysis Facilitates the Identification of Large Human Heart Proteoforms. Analytical Chemistry. PMID 31393705 DOI: 10.1021/Acs.Analchem.9B02343 |
0.809 |
|
| 2019 |
Roberts DS, Chen B, Tiambeng TN, Wu Z, Ge Y, Jin S. Reproducible Large-Scale Synthesis of Surface Silanized Nanoparticles as an Enabling Nanoproteomics Platform: Enrichment of the Human Heart Phosphoproteome. Nano Research. 12: 1473-1481. PMID 31341559 DOI: 10.1007/S12274-019-2418-4 |
0.772 |
|
| 2019 |
Donnelly DP, Rawlins CM, DeHart CJ, Fornelli L, Schachner LF, Lin Z, Lippens JL, Aluri KC, Sarin R, Chen B, Lantz C, Jung W, Johnson KR, Koller A, Wolff JJ, ... ... Ge Y, et al. Best practices and benchmarks for intact protein analysis for top-down mass spectrometry. Nature Methods. 16: 587-594. PMID 31249407 DOI: 10.1038/S41592-019-0457-0 |
0.828 |
|
| 2019 |
Biermann M, Cai W, Lang D, Hermsen J, Profio L, Zhou Y, Czirok A, Isai DG, Napiwocki BN, Rodriguez AM, Brown ME, Woon MT, Shao A, Han T, Park D, ... ... Ge Y, et al. Epigenetic Priming of Human Pluripotent Stem Cell-Derived Cardiac Progenitor Cells Accelerates Cardiomyocyte Maturation. Stem Cells (Dayton, Ohio). PMID 31087611 DOI: 10.1002/Stem.3021 |
0.693 |
|
| 2019 |
Schaffer LV, Millikin RJ, Miller RM, Anderson LC, Fellers RT, Ge Y, Kelleher NL, LeDuc RD, Liu X, Payne SH, Sun L, Thomas PM, Tucholski T, Wang Z, Wu S, et al. Identification and Quantification of Proteoforms by Mass Spectrometry. Proteomics. e1800361. PMID 31050378 DOI: 10.1002/Pmic.201800361 |
0.809 |
|
| 2019 |
Brown KA, Chen B, Guardado-Alvarez TM, Lin Z, Hwang L, Ayaz-Guner S, Jin S, Ge Y. A photocleavable surfactant for top-down proteomics. Nature Methods. PMID 30988469 DOI: 10.1038/S41592-019-0391-1 |
0.791 |
|
| 2019 |
Jin Y, Diffee GM, Colman RJ, Anderson RM, Ge Y. Top-down Mass Spectrometry of Sarcomeric Protein Post-translational Modifications from Non-human Primate Skeletal Muscle. Journal of the American Society For Mass Spectrometry. PMID 30834509 DOI: 10.1007/S13361-019-02139-0 |
0.759 |
|
| 2019 |
Tucholski T, Knott S, Chen B, Pistono P, Lin Z, Ge Y. A Top-Down Proteomics Platform Coupling Serial Size Exclusion Chromatography and Fourier Transform Ion Cyclotron Resonance Mass Spectrometry. Analytical Chemistry. PMID 30758949 DOI: 10.1021/Acs.Analchem.8B04082 |
0.838 |
|
| 2019 |
Liang Y, Jin Y, Wu Z, Tucholski T, Brown KA, Zhang L, Zhang Y, Ge Y. Bridged Hybrid Monolithic Column Coupled to High-Resolution Mass Spectrometry for Top-down Proteomics. Analytical Chemistry. PMID 30668094 DOI: 10.1021/Acs.Analchem.8B05817 |
0.836 |
|
| 2019 |
Gregorich ZR, Patel JR, Cai W, Lin Z, Heurer R, Fitzsimons DP, Moss RL, Ge Y. Deletion of Enigma Homologue from the Z-disc slows tension development kinetics in mouse myocardium. The Journal of General Physiology. PMID 30642915 DOI: 10.1085/Jgp.201812214 |
0.809 |
|
| 2019 |
Sun M, Jin Y, Zhu C, Rexiati M, Cai H, Liss M, Gotthardt M, Ge Y, Guo W. Abstract 891: Phosphorylation of RNA Binding Motif 20 is a Novel Target to Reduce Myocardial Stiffness in Diastolic Dysfunction Circulation Research. 125. DOI: 10.1161/Res.125.Suppl_1.891 |
0.669 |
|
| 2019 |
Schaffer LV, Millikin RJ, Miller RM, Anderson LC, Fellers RT, Ge Y, Kelleher NL, LeDuc RD, Liu X, Payne SH, Sun L, Thomas PM, Tucholski T, Wang Z, Wu S, et al. Back Cover: Identification and Quantification of Proteoforms by Mass Spectrometry Proteomics. 19: 1970085. DOI: 10.1002/Pmic.201970085 |
0.799 |
|
| 2018 |
Lin Z, Wei L, Cai W, Zhu Y, Tucholski T, Mitchell SD, Guo W, Ford SP, Diffee GM, Ge Y. Simultaneous Quantification of Protein Expression and Modifications by Top-down Targeted Proteomics: A Case of Sarcomeric Subproteome. Molecular & Cellular Proteomics : McP. PMID 30591534 DOI: 10.1074/Mcp.Tir118.001086 |
0.836 |
|
| 2018 |
Chen B, Brown KA, Lin Z, Ge Y. Correction to Top-Down Proteomics: Ready for Prime Time? Analytical Chemistry. PMID 30522269 DOI: 10.1021/Acs.Analchem.8B05506 |
0.725 |
|
| 2018 |
Jin Y, Lin Z, Xu Q, Fu C, Zhang Z, Zhang Q, Pritts WA, Ge Y. Comprehensive characterization of monoclonal antibody by Fourier transform ion cyclotron resonance mass spectrometry. Mabs. PMID 30230956 DOI: 10.1080/19420862.2018.1525253 |
0.747 |
|
| 2018 |
Cai W, Hite ZL, Lyu B, Wu Z, Lin Z, Gregorich ZR, Messer AE, McIlwain S, Marston SB, Kohmoto T, Ge Y. Temperature-sensitive sarcomeric protein post-translational modifications revealed by top-down proteomics. Journal of Molecular and Cellular Cardiology. PMID 30048711 DOI: 10.1016/J.Yjmcc.2018.07.247 |
0.806 |
|
| 2018 |
Chen B, Lin Z, Alpert AJ, Fu C, Zhang Q, Pritts WA, Ge Y. Online Hydrophobic Interaction Chromatography-Mass Spectrometry for the Analysis of Intact Monoclonal Antibodies. Analytical Chemistry. PMID 29846060 DOI: 10.1021/Acs.Analchem.8B01865 |
0.792 |
|
| 2018 |
Martin-Garrido A, Biesiadecki BJ, Salhi HE, Shaifta Y, Dos Remedios CG, Ayuz-Guner S, Cai W, Ge Y, Avkiran M, Kentish JC. Monophosphorylation of cardiac troponin-I at Ser23/24 is sufficient to regulate cardiac myofibrillar Ca sensitivity and calpain-induced proteolysis. The Journal of Biological Chemistry. PMID 29669813 DOI: 10.1074/Jbc.Ra117.001292 |
0.716 |
|
| 2018 |
Lin Z, Guo F, Gregorich ZR, Sun R, Zhang H, Hu Y, Shanmuganayagam D, Ge Y. Comprehensive Characterization of Swine Cardiac Troponin T Proteoforms by Top-Down Mass Spectrometry. Journal of the American Society For Mass Spectrometry. PMID 29633223 DOI: 10.1007/S13361-018-1925-Y |
0.785 |
|
| 2018 |
Wu Z, Tiambeng TN, Cai W, Chen B, Lin Z, Gregorich ZR, Ge Y. What is the Impact of Phosphorylation on the Mass Spectrometry Quantification of Intact Phosphoproteins? Analytical Chemistry. PMID 29565561 DOI: 10.1021/Acs.Analchem.7B05246 |
0.827 |
|
| 2018 |
Smelter DF, De Lange WJ, Cai W, Ge Y, Ralphe JC. The HCM-linked W792R mutation in cardiac myosin binding protein-C reduces C6 FnIII domain stability. American Journal of Physiology. Heart and Circulatory Physiology. PMID 29451820 DOI: 10.1152/Ajpheart.00686.2017 |
0.714 |
|
| 2018 |
Aebersold R, Agar JN, Amster IJ, Baker MS, Bertozzi CR, Boja ES, Costello CE, Cravatt BF, Fenselau C, Garcia BA, Ge Y, Gunawardena J, Hendrickson RC, Hergenrother PJ, Huber CG, et al. How many human proteoforms are there? Nature Chemical Biology. 14: 206-214. PMID 29443976 DOI: 10.1038/Nchembio.2576 |
0.792 |
|
| 2018 |
Chen Z, Song J, Chen L, Zhu C, Cai H, Sun M, Stern A, Mozdziak P, Ge Y, Means WJ, Guo W. Characterization of TTN Novex Splicing Variants across Species and the Role of RBM20 in Novex-Specific Exon Splicing. Genes. 9. PMID 29438341 DOI: 10.3390/Genes9020086 |
0.338 |
|
| 2018 |
LeDuc RD, Schwämmle V, Shortreed MR, Cesnik AJ, Solntsev SK, Shaw JB, Martin MJ, Vizcaíno JA, Alpi E, Danis P, Kelleher NL, Smith LM, Ge Y, Agar JN, Chamot-Rooke J, et al. ProForma: a Standard Proteoform Notation. Journal of Proteome Research. PMID 29397739 DOI: 10.1021/Acs.Jproteome.7B00851 |
0.603 |
|
| 2018 |
Kentish JC, Martin-Garrido A, Biesiadecki BJ, Salhi HE, Shaifta Y, Dos Remedios C, Ayaz-Guner S, Cai W, Ge Y, Avkiran M. P457Monophosphorylation of cardiac troponin-I at Ser23/24 regulates cardiac myofibrillar Ca2+ sensitivity and modulates calpain-induced proteolysis Cardiovascular Research. 114: S110-S110. DOI: 10.1093/Cvr/Cvy060.316 |
0.688 |
|
| 2017 |
Gao L, Gregorich ZR, Zhu W, Mattapally S, Oduk Y, Lou X, Kannappan R, Borovjagin AV, Walcott GP, Pollard AE, Fast VG, Hu X, Lloyd SG, Ge Y, Zhang J. Large Cardiac-Muscle Patches Engineered from Human Induced-Pluripotent Stem-Cell-Derived Cardiac Cells Improve Recovery from Myocardial Infarction in Swine. Circulation. PMID 29233823 DOI: 10.1161/Circulationaha.117.030785 |
0.709 |
|
| 2017 |
Chen B, Brown KA, Lin Z, Ge Y. Top-down Proteomics: Ready for Prime Time? Analytical Chemistry. PMID 29161012 DOI: 10.1021/Acs.Analchem.7B04747 |
0.785 |
|
| 2017 |
Hu CW, Worth M, Fan D, Li B, Li H, Lu L, Zhong X, Lin Z, Wei L, Ge Y, Li L, Jiang J. Electrophilic probes for deciphering substrate recognition by O-GlcNAc transferase. Nature Chemical Biology. PMID 29058723 DOI: 10.1038/Nchembio.2494 |
0.338 |
|
| 2017 |
Wei L, Gregorich ZR, Lin Z, Cai W, Jin Y, McKiernan SH, McIlwain S, Aiken JM, Moss RL, Diffee GM, Ge Y. Novel Sarcopenia-related Alterations in Sarcomeric Protein Post-translational Modifications in Skeletal Muscles Identified by Top-down Proteomics. Molecular & Cellular Proteomics : McP. PMID 29046390 DOI: 10.1074/Mcp.Ra117.000124 |
0.795 |
|
| 2017 |
Wu CG, Chen H, Guo F, Yadav VK, Mcilwain SJ, Rowse M, Choudhary A, Lin Z, Li Y, Gu T, Zheng A, Xu Q, Lee W, Resch E, Johnson B, ... ... Ge Y, et al. PP2A-B' holoenzyme substrate recognition, regulation and role in cytokinesis. Cell Discovery. 3: 17027. PMID 28884018 DOI: 10.1038/Celldisc.2017.27 |
0.317 |
|
| 2017 |
Crowe SO, Rana ASJB, Deol KK, Ge Y, Strieter ER. Correction to Ubiquitin Chain Enrichment Middle-Down Mass Spectrometry Enables Characterization of Branched Ubiquitin Chains in Cellulo. Analytical Chemistry. PMID 28792741 DOI: 10.1021/Acs.Analchem.7B02855 |
0.329 |
|
| 2017 |
Rana ASJB, Ge Y, Strieter ER. Ubiquitin Chain Enrichment Middle-Down Mass Spectrometry (UbiChEM-MS) Reveals Cell-Cycle Dependent Formation of Lys11/Lys48 Branched Ubiquitin Chains. Journal of Proteome Research. PMID 28737031 DOI: 10.1021/Acs.Jproteome.7B00381 |
0.357 |
|
| 2017 |
Chen B, Guo X, Tucholski T, Lin Z, McIlwain S, Ge Y. The Impact of Phosphorylation on Electron Capture Dissociation of Proteins: A Top-Down Perspective. Journal of the American Society For Mass Spectrometry. PMID 28685494 DOI: 10.1007/S13361-017-1710-3 |
0.8 |
|
| 2017 |
Chen B, Hwang L, Ochowicz W, Lin Z, Guardado-Alvarez TM, Cai W, Xiu L, Dani K, Colah C, Jin S, Ge Y. Coupling functionalized cobalt ferrite nanoparticle enrichment with online LC/MS/MS for top-down phosphoproteomics. Chemical Science. 8: 4306-4311. PMID 28660060 DOI: 10.1039/C6Sc05435H |
0.831 |
|
| 2017 |
Gregorich ZR, Cai W, Lin Z, Chen AJ, Peng Y, Kohmoto T, Ge Y. Distinct sequences and post-translational modifications in cardiac atrial and ventricular myosin light chains revealed by top-down mass spectrometry. Journal of Molecular and Cellular Cardiology. PMID 28427997 DOI: 10.1016/J.Yjmcc.2017.04.002 |
0.816 |
|
| 2017 |
Cai W, Tucholski T, Chen B, Alpert AJ, McIlwain S, Kohmoto T, Jin S, Ge Y. Top-down Proteomics of Large Proteins up to 223 kDa Enabled by Serial Size Exclusion Chromatography Strategy. Analytical Chemistry. PMID 28406609 DOI: 10.1021/Acs.Analchem.7B00380 |
0.83 |
|
| 2017 |
Jin Y, Wei L, Cai W, Lin Z, Wu Z, Peng Y, Kohmoto T, Moss RL, Ge Y. Complete Characterization of Cardiac Myosin Heavy Chain (223 kDa) Enabled by Size-Exclusion Chromatography and Middle-down Mass Spectrometry. Analytical Chemistry. PMID 28366003 DOI: 10.1021/Acs.Analchem.7B00113 |
0.833 |
|
| 2017 |
Yang L, Gregorich ZR, Cai W, Zhang P, Young B, Gu Y, Zhang J, Ge Y. Quantitative Proteomics and Immunohistochemistry Reveal Insights into Cellular and Molecular Processes in the Infarct Border Zone One Month after Myocardial Infarction. Journal of Proteome Research. PMID 28347137 DOI: 10.1021/Acs.Jproteome.7B00107 |
0.797 |
|
| 2017 |
Crowe SO, Rana AS, Deol KK, Ge Y, Strieter ER. Ubiquitin Chain Enrichment Middle-Down Mass Spectrometry (UbiCHEM-MS) Enables Characterization of Branched Ubiquitin Chains In Cellulo. Analytical Chemistry. PMID 28291339 DOI: 10.1021/Acs.Analchem.6B03675 |
0.359 |
|
| 2017 |
Cai W, Zhang J, de Lange WJ, Gregorich Z, Carter Ralphe J, Kamp T, Ge Y. Top-down proteomics for assessing the maturation of stem cell-derived cardiomyocytes Journal of Molecular and Cellular Cardiology. 112: 165-166. DOI: 10.1016/J.Yjmcc.2017.07.104 |
0.766 |
|
| 2017 |
Gregorich Z, Patel J, Cai W, Heurer R, Lin Z, Moss R, Ge Y. Deletion of the Z-disc Protein Enigma Homolog Depresses Cross-bridge Cycling Kinetics in Mouse Myocardium Journal of Molecular and Cellular Cardiology. 112: 142. DOI: 10.1016/J.Yjmcc.2017.07.037 |
0.778 |
|
| 2016 |
Cai W, Tucholski TM, Gregorich ZR, Ge Y. Top-down Proteomics for Comprehensive Analysis of Protein Isoforms and Modifications: Technology Advancements and Applications to Heart Diseases. Expert Review of Proteomics. PMID 27448560 DOI: 10.1080/14789450.2016.1209414 |
0.777 |
|
| 2016 |
Gregorich ZR, Peng Y, Cai W, Jin Y, Wei L, Chen AJ, McKiernan SH, Aiken JM, Moss RL, Diffee GM, Ge Y. Top-down Targeted Proteomics Reveals Decrease in Myosin Regulatory Light Chain Phosphorylation that Contributes to Sarcopenic Muscle Dysfunction. Journal of Proteome Research. PMID 27362462 DOI: 10.1021/Acs.Jproteome.6B00244 |
0.79 |
|
| 2016 |
Crowe SO, Pham GH, Guenette RG, Ziegler JC, Deol KK, Ge Y, Strieter E. Subunit-Specific Labeling of Ubiquitin Chains Using Sortase: Insights into the Selectivity of Deubiquitinases. Chembiochem : a European Journal of Chemical Biology. PMID 27256865 DOI: 10.1002/Cbic.201600276 |
0.305 |
|
| 2016 |
Jin Y, Peng Y, Lin Z, Chen YC, Wei L, Hacker TA, Larsson L, Ge Y. Comprehensive analysis of tropomyosin isoforms in skeletal muscles by top-down proteomics. Journal of Muscle Research and Cell Motility. PMID 27090236 DOI: 10.1007/S10974-016-9443-7 |
0.712 |
|
| 2016 |
Chen B, Peng Y, Valeja SG, Xiu L, Alpert AJ, Ge Y. Online Hydrophobic Interaction Chromatography-Mass spectrometry for Top-down Proteomics. Analytical Chemistry. PMID 26729044 DOI: 10.1021/Acs.Analchem.5B04285 |
0.807 |
|
| 2015 |
Ge Y, Ning Z, Wang Y, Zheng Y, Zhang C, Figeys D. Quantitative proteomic analysis of Dunaliella salina upon acute arsenate exposure. Chemosphere. 145: 112-118. PMID 26688246 DOI: 10.1016/J.Chemosphere.2015.11.049 |
0.302 |
|
| 2015 |
Cai W, Guner H, Gregorich ZR, Chen AJ, Ayaz-Guner S, Peng Y, Valeja SG, Liu X, Ge Y. MASH Suite Pro: A Comprehensive Software Tool for Top-down Proteomics. Molecular & Cellular Proteomics : McP. PMID 26598644 DOI: 10.1074/Mcp.O115.054387 |
0.826 |
|
| 2015 |
Yu D, Peng Y, Ayaz-Guner S, Gregorich ZR, Ge Y. Comprehensive Characterization of AMP-Activated Protein Kinase Catalytic Domain by Top-Down Mass Spectrometry. Journal of the American Society For Mass Spectrometry. PMID 26489410 DOI: 10.1007/S13361-015-1286-8 |
0.727 |
|
| 2015 |
Gregorich ZR, Peng Y, Lane NM, Wolff JJ, Wang S, Guo W, Guner H, Doop J, Hacker TA, Ge Y. Comprehensive assessment of chamber-specific and transmural heterogeneity in myofilament protein phosphorylation by top-down mass spectrometry. Journal of Molecular and Cellular Cardiology. 87: 102-112. PMID 26268593 DOI: 10.1016/J.Yjmcc.2015.08.007 |
0.761 |
|
| 2015 |
Chen YC, Ayaz-Guner S, Peng Y, Lane NM, Locher MR, Kohmoto T, Larsson L, Moss RL, Ge Y. Effective Top-Down LC/MS+ Method for Assessing Actin Isoforms as a Potential Cardiac Disease Marker. Analytical Chemistry. 87: 8399-406. PMID 26189812 DOI: 10.1021/Acs.Analchem.5B01745 |
0.405 |
|
| 2015 |
Chang YH, Ye L, Cai W, Lee Y, Guner H, Lee Y, Kamp TJ, Zhang J, Ge Y. Quantitative Proteomics Reveals Differential Regulation of Protein Expression in Recipient Myocardium after Trilineage Cardiovascular Cell Transplantation. Proteomics. PMID 26033914 DOI: 10.1002/Pmic.201500131 |
0.737 |
|
| 2015 |
Valeja SG, Xiu L, Gregorich ZR, Guner H, Jin S, Ge Y. Three dimensional liquid chromatography coupling ion exchange chromatography/hydrophobic interaction chromatography/reverse phase chromatography for effective protein separation in top-down proteomics. Analytical Chemistry. 87: 5363-71. PMID 25867201 DOI: 10.1021/Acs.Analchem.5B00657 |
0.768 |
|
| 2015 |
Hwang L, Ayaz-Guner S, Gregorich ZR, Cai W, Valeja SG, Jin S, Ge Y. Specific enrichment of phosphoproteins using functionalized multivalent nanoparticles. Journal of the American Chemical Society. 137: 2432-5. PMID 25655481 DOI: 10.1021/Ja511833Y |
0.799 |
|
| 2015 |
Chen YC, Sumandea MP, Larsson L, Moss RL, Ge Y. Dissecting human skeletal muscle troponin proteoforms by top-down mass spectrometry. Journal of Muscle Research and Cell Motility. 36: 169-81. PMID 25613324 DOI: 10.1007/S10974-015-9404-6 |
0.412 |
|
| 2015 |
Chang YH, Gregorich ZR, Chen AJ, Hwang L, Guner H, Yu D, Zhang J, Ge Y. New mass-spectrometry-compatible degradable surfactant for tissue proteomics. Journal of Proteome Research. 14: 1587-99. PMID 25589168 DOI: 10.1021/Pr5012679 |
0.776 |
|
| 2014 |
Valkevich EM, Sanchez NA, Ge Y, Strieter ER. Middle-down mass spectrometry enables characterization of branched ubiquitin chains. Biochemistry. 53: 4979-89. PMID 25023374 DOI: 10.1021/Bi5006305 |
0.368 |
|
| 2014 |
Peng Y, Gregorich ZR, Valeja SG, Zhang H, Cai W, Chen YC, Guner H, Chen AJ, Schwahn DJ, Hacker TA, Liu X, Ge Y. Top-down proteomics reveals concerted reductions in myofilament and Z-disc protein phosphorylation after acute myocardial infarction. Molecular & Cellular Proteomics : McP. 13: 2752-64. PMID 24969035 DOI: 10.1074/Mcp.M114.040675 |
0.827 |
|
| 2014 |
Xiu L, Valeja SG, Alpert AJ, Jin S, Ge Y. Effective protein separation by coupling hydrophobic interaction and reverse phase chromatography for top-down proteomics. Analytical Chemistry. 86: 7899-906. PMID 24968279 DOI: 10.1021/Ac501836K |
0.493 |
|
| 2014 |
Peng Y, Ayaz-Guner S, Yu D, Ge Y. Top-down mass spectrometry of cardiac myofilament proteins in health and disease. Proteomics. Clinical Applications. 8: 554-68. PMID 24945106 DOI: 10.1002/Prca.201400043 |
0.512 |
|
| 2014 |
Gregorich ZR, Ge Y. Top-down proteomics in health and disease: challenges and opportunities. Proteomics. 14: 1195-210. PMID 24723472 DOI: 10.1002/Pmic.201300432 |
0.751 |
|
| 2014 |
Gregorich ZR, Chang YH, Ge Y. Proteomics in heart failure: top-down or bottom-up? Pflã¼Gers Archiv : European Journal of Physiology. 466: 1199-209. PMID 24619480 DOI: 10.1007/S00424-014-1471-9 |
0.777 |
|
| 2014 |
Witayavanitkul N, Ait Mou Y, Kuster DW, Khairallah RJ, Sarkey J, Govindan S, Chen X, Ge Y, Rajan S, Wieczorek DF, Irving T, Westfall MV, de Tombe PP, Sadayappan S. Myocardial infarction-induced N-terminal fragment of cardiac myosin-binding protein C (cMyBP-C) impairs myofilament function in human myocardium. The Journal of Biological Chemistry. 289: 8818-27. PMID 24509847 DOI: 10.1074/Jbc.M113.541128 |
0.352 |
|
| 2014 |
Chen S, Zhu P, Guo HM, Solis RS, Wang Y, Ma Y, Wang J, Gao J, Chen JM, Ge Y, Zhuang J, Li J. Alpha1 catalytic subunit of AMPK modulates contractile function of cardiomyocytes through phosphorylation of troponin I. Life Sciences. 98: 75-82. PMID 24447627 DOI: 10.1016/J.Lfs.2014.01.006 |
0.336 |
|
| 2014 |
Guner H, Close PL, Cai W, Zhang H, Peng Y, Gregorich ZR, Ge Y. MASH Suite: a user-friendly and versatile software interface for high-resolution mass spectrometry data interpretation and visualization. Journal of the American Society For Mass Spectrometry. 25: 464-70. PMID 24385400 DOI: 10.1007/S13361-013-0789-4 |
0.804 |
|
| 2014 |
Witayavanitkul N, Sarkey J, Aitmou Y, Kuster DW, Khairallah RJ, Govindan S, Chen X, Ge Y, Rajan S, Wieczorek DF, Irving T, de Tombe PP, Sadayappan S. Myocardial Infarction-Induced N-Terminal Fragment of Cmybp-C Impairs Myofilament Function in Human Left Ventricular Myofibrils Biophysical Journal. 106: 347a. DOI: 10.1016/J.Bpj.2013.11.1977 |
0.368 |
|
| 2013 |
Zhao DS, Gregorich ZR, Ge Y. High throughput screening of disulfide-containing proteins in a complex mixture. Proteomics. 13: 3256-60. PMID 24030959 DOI: 10.1002/Pmic.201300242 |
0.776 |
|
| 2013 |
Peng Y, Yu D, Gregorich Z, Chen X, Beyer AM, Gutterman DD, Ge Y. In-depth proteomic analysis of human tropomyosin by top-down mass spectrometry. Journal of Muscle Research and Cell Motility. 34: 199-210. PMID 23881156 DOI: 10.1007/S10974-013-9352-Y |
0.755 |
|
| 2013 |
Miao J, Lawrence M, Jeffers V, Zhao F, Parker D, Ge Y, Sullivan WJ, Cui L. Extensive lysine acetylation occurs in evolutionarily conserved metabolic pathways and parasite-specific functions during Plasmodium falciparum intraerythrocytic development. Molecular Microbiology. 89: 660-75. PMID 23796209 DOI: 10.1111/Mmi.12303 |
0.391 |
|
| 2013 |
Chen X, Ge Y. Ultrahigh pressure fast size exclusion chromatography for top-down proteomics. Proteomics. 13: 2563-6. PMID 23794208 DOI: 10.1002/Pmic.201200594 |
0.497 |
|
| 2013 |
Peng Y, Chen X, Zhang H, Xu Q, Hacker TA, Ge Y. Top-down targeted proteomics for deep sequencing of tropomyosin isoforms. Journal of Proteome Research. 12: 187-98. PMID 23256820 DOI: 10.1021/Pr301054N |
0.431 |
|
| 2013 |
Guy MJ, Chen YC, Clinton L, Zhang H, Zhang J, Dong X, Xu Q, Ayaz-Guner S, Ge Y. The impact of antibody selection on the detection of cardiac troponin I. Clinica Chimica Acta; International Journal of Clinical Chemistry. 420: 82-8. PMID 23107929 DOI: 10.1016/J.Cca.2012.10.034 |
0.31 |
|
| 2012 |
Yang C, Park AC, Davis NA, Russell JD, Kim B, Brand DD, Lawrence MJ, Ge Y, Westphall MS, Coon JJ, Greenspan DS. Comprehensive mass spectrometric mapping of the hydroxylated amino acid residues of the α1(V) collagen chain. The Journal of Biological Chemistry. 287: 40598-610. PMID 23060441 DOI: 10.1074/Jbc.M112.406850 |
0.303 |
|
| 2012 |
Jia C, Hui L, Cao W, Lietz CB, Jiang X, Chen R, Catherman AD, Thomas PM, Ge Y, Kelleher NL, Li L. High-definition de novo sequencing of crustacean hyperglycemic hormone (CHH)-family neuropeptides. Molecular & Cellular Proteomics : McP. 11: 1951-64. PMID 23028060 DOI: 10.1074/Mcp.M112.020537 |
0.546 |
|
| 2012 |
Valkevich EM, Guenette RG, Sanchez NA, Chen YC, Ge Y, Strieter ER. Forging isopeptide bonds using thiol-ene chemistry: site-specific coupling of ubiquitin molecules for studying the activity of isopeptidases. Journal of the American Chemical Society. 134: 6916-9. PMID 22497214 DOI: 10.1021/Ja300500A |
0.301 |
|
| 2012 |
Du J, Teng RJ, Lawrence M, Guan T, Xu H, Ge Y, Shi Y. The protein partners of GTP cyclohydrolase I in rat organs. Plos One. 7: e33991. PMID 22479495 DOI: 10.1371/Journal.Pone.0033991 |
0.348 |
|
| 2012 |
Oliveira SM, Zhang YH, Solis RS, Isackson H, Bellahcene M, Yavari A, Pinter K, Davies JK, Ge Y, Ashrafian H, Walker JW, Carling D, Watkins H, Casadei B, Redwood C. AMP-activated protein kinase phosphorylates cardiac troponin I and alters contractility of murine ventricular myocytes. Circulation Research. 110: 1192-201. PMID 22456184 DOI: 10.1161/Circresaha.111.259952 |
0.371 |
|
| 2012 |
Peng Y, Chen X, Sato T, Rankin SA, Tsuji RF, Ge Y. Purification and high-resolution top-down mass spectrometric characterization of human salivary α-amylase. Analytical Chemistry. 84: 3339-46. PMID 22390166 DOI: 10.1021/Ac300083Y |
0.459 |
|
| 2012 |
Wang Y, Pinto JR, Solis RS, Dweck D, Liang J, Diaz-Perez Z, Ge Y, Walker JW, Potter JD. Generation and functional characterization of knock-in mice harboring the cardiac troponin I-R21C mutation associated with hypertrophic cardiomyopathy. The Journal of Biological Chemistry. 287: 2156-67. PMID 22086914 DOI: 10.1074/Jbc.M111.294306 |
0.323 |
|
| 2012 |
Dong X, Sumandea CA, Chen YC, Garcia-Cazarin ML, Zhang J, Balke CW, Sumandea MP, Ge Y. Augmented phosphorylation of cardiac troponin I in hypertensive heart failure Journal of Biological Chemistry. 287: 848-857. PMID 22052912 DOI: 10.1074/Jbc.M111.293258 |
0.398 |
|
| 2011 |
Zhang H, Ge Y. Comprehensive analysis of protein modifications by top-down mass spectrometry. Circulation. Cardiovascular Genetics. 4: 711. PMID 22187450 DOI: 10.1161/Circgenetics.110.957829 |
0.527 |
|
| 2011 |
Zhang J, Guy MJ, Norman HS, Chen YC, Xu Q, Dong X, Guner H, Wang S, Kohmoto T, Young KH, Moss RL, Ge Y. Top-down quantitative proteomics identified phosphorylation of cardiac troponin I as a candidate biomarker for chronic heart failure. Journal of Proteome Research. 10: 4054-65. PMID 21751783 DOI: 10.1021/Pr200258M |
0.405 |
|
| 2011 |
Zhang J, Zhang H, Ayaz-Guner S, Chen YC, Dong X, Xu Q, Ge Y. Phosphorylation, but not alternative splicing or proteolytic degradation, is conserved in human and mouse cardiac troponin T. Biochemistry. 50: 6081-92. PMID 21639091 DOI: 10.1021/Bi2006256 |
0.507 |
|
| 2011 |
Sancho Solis R, Ge Y, Walker JW. A preferred AMPK phosphorylation site adjacent to the inhibitory loop of cardiac and skeletal troponin I. Protein Science : a Publication of the Protein Society. 20: 894-907. PMID 21416543 DOI: 10.1002/Pro.623 |
0.412 |
|
| 2011 |
Kuhn P, Chumanov R, Wang Y, Ge Y, Burgess RR, Xu W. Automethylation of CARM1 allows coupling of transcription and mRNA splicing. Nucleic Acids Research. 39: 2717-26. PMID 21138967 DOI: 10.1093/Nar/Gkq1246 |
0.301 |
|
| 2011 |
Xu F, Xu Q, Dong X, Guy M, Guner H, Hacker TA, Ge Y. Top-down high-resolution electron capture dissociation mass spectrometry for comprehensive characterization of post-translational modifications in Rhesus monkey cardiac troponin i International Journal of Mass Spectrometry. 305: 95-102. DOI: 10.1016/J.Ijms.2010.09.007 |
0.509 |
|
| 2010 |
Nelson CA, Szczech JR, Dooley CJ, Xu Q, Lawrence MJ, Zhu H, Jin S, Ge Y. Effective enrichment and mass spectrometry analysis of phosphopeptides using mesoporous metal oxide nanomaterials. Analytical Chemistry. 82: 7193-201. PMID 20704311 DOI: 10.1021/Ac100877A |
0.436 |
|
| 2010 |
Zhang J, Dong X, Hacker TA, Ge Y. Deciphering modifications in swine cardiac troponin I by top-down high-resolution tandem mass spectrometry. Journal of the American Society For Mass Spectrometry. 21: 940-8. PMID 20223681 DOI: 10.1016/J.Jasms.2010.02.005 |
0.487 |
|
| 2009 |
Nelson CA, Szczech JR, Xu Q, Lawrence MJ, Jin S, Ge Y. Mesoporous zirconium oxide nanomaterials effectively enrich phosphopeptides for mass spectrometry-based phosphoproteomics. Chemical Communications (Cambridge, England). 6607-9. PMID 19865665 DOI: 10.1039/B908788E |
0.306 |
|
| 2009 |
Ayaz-Guner S, Zhang J, Li L, Walker JW, Ge Y. In vivo phosphorylation site mapping in mouse cardiac troponin I by high resolution top-down electron capture dissociation mass spectrometry: Ser22/23 are the only sites basally phosphorylated. Biochemistry. 48: 8161-70. PMID 19637843 DOI: 10.1021/Bi900739F |
0.452 |
|
| 2009 |
Ge Y, Rybakova IN, Xu Q, Moss RL. Top-down high-resolution mass spectrometry of cardiac myosin binding protein C revealed that truncation alters protein phosphorylation state. Proceedings of the National Academy of Sciences of the United States of America. 106: 12658-63. PMID 19541641 DOI: 10.1073/Pnas.0813369106 |
0.487 |
|
| 2009 |
Kuhn P, Xu Q, Cline E, Zhang D, Ge Y, Xu W. Delineating Anopheles gambiae coactivator associated arginine methyltransferase 1 automethylation using top-down high resolution tandem mass spectrometry. Protein Science : a Publication of the Protein Society. 18: 1272-80. PMID 19472346 DOI: 10.1002/Pro.139 |
0.417 |
|
| 2009 |
Ma M, Chen R, Ge Y, He H, Marshall AG, Li L. Combining bottom-up and top-down mass spectrometric strategies for de novo sequencing of the crustacean hyperglycemic hormone from Cancer borealis. Analytical Chemistry. 81: 240-7. PMID 19046072 DOI: 10.1021/Ac801910G |
0.414 |
|
| 2009 |
Solis RS, Ge Y, Walker JW. High Resolution Top-Down MS/MS Reveals Single Amino Acid Sequence Polymorphisms in Rat Cardiac Troponin Biophysical Journal. 96: 503a. DOI: 10.1016/J.Bpj.2008.12.2592 |
0.483 |
|
| 2008 |
Sancho Solis R, Ge Y, Walker JW. Single amino acid sequence polymorphisms in rat cardiac troponin revealed by top-down tandem mass spectrometry. Journal of Muscle Research and Cell Motility. 29: 203-12. PMID 19165611 DOI: 10.1007/S10974-009-9168-Y |
0.469 |
|
| 2008 |
Zabrouskov V, Ge Y, Schwartz J, Walker JW. Unraveling molecular complexity of phosphorylated human cardiac troponin I by top down electron capture dissociation/electron transfer dissociation mass spectrometry. Molecular & Cellular Proteomics : McP. 7: 1838-49. PMID 18445579 DOI: 10.1074/Mcp.M700524-Mcp200 |
0.472 |
|
| 2005 |
Colabroy KL, Zhai H, Li T, Ge Y, Zhang Y, Liu A, Ealick SE, McLafferty FW, Begley TP. The mechanism of inactivation of 3-hydroxyanthranilate-3,4-dioxygenase by 4-chloro-3-hydroxyanthranilate. Biochemistry. 44: 7623-31. PMID 15909977 DOI: 10.1021/Bi0473455 |
0.65 |
|
| 2003 |
Ge Y, Lawhorn BG, ElNaggar M, Sze SK, Begley TP, McLafferty FW. Detection of four oxidation sites in viral prolyl-4-hydroxylase by top-down mass spectrometry. Protein Science : a Publication of the Protein Society. 12: 2320-6. PMID 14500890 DOI: 10.1110/Ps.03244403 |
0.801 |
|
| 2003 |
Sze SK, Ge Y, Oh H, McLafferty FW. Plasma electron capture dissociation for the characterization of large proteins by top down mass spectrometry. Analytical Chemistry. 75: 1599-603. PMID 12705591 DOI: 10.1021/Ac020446T |
0.491 |
|
| 2003 |
Ge Y, El-Naggar M, Sze SK, Oh HB, Begley TP, McLafferty FW, Boshoff H, Barry CE. Top down characterization of secreted proteins from Mycobacterium tuberculosis by electron capture dissociation mass spectrometry. Journal of the American Society For Mass Spectrometry. 14: 253-61. PMID 12648932 DOI: 10.1016/S1044-0305(02)00913-3 |
0.694 |
|
| 2002 |
Oh H, Breuker K, Sze SK, Ge Y, Carpenter BK, McLafferty FW. Secondary and tertiary structures of gaseous protein ions characterized by electron capture dissociation mass spectrometry and photofragment spectroscopy. Proceedings of the National Academy of Sciences of the United States of America. 99: 15863-8. PMID 12444260 DOI: 10.1073/Pnas.212643599 |
0.501 |
|
| 2002 |
Sze SK, Ge Y, Oh H, McLafferty FW. Top-down mass spectrometry of a 29-kDa protein for characterization of any posttranslational modification to within one residue. Proceedings of the National Academy of Sciences of the United States of America. 99: 1774-9. PMID 11842225 DOI: 10.1073/Pnas.251691898 |
0.548 |
|
| 2002 |
Ge Y, Lawhorn BG, ElNaggar M, Strauss E, Park JH, Begley TP, McLafferty FW. Top down characterization of larger proteins (45 kDa) by electron capture dissociation mass spectrometry. Journal of the American Chemical Society. 124: 672-8. PMID 11804498 DOI: 10.1021/Ja011335Z |
0.831 |
|
| 2001 |
Xi J, Ge Y, Kinsland C, McLafferty FW, Begley TP. Biosynthesis of the thiazole moiety of thiamin in Escherichia coli: identification of an acyldisulfide-linked protein--protein conjugate that is functionally analogous to the ubiquitin/E1 complex. Proceedings of the National Academy of Sciences of the United States of America. 98: 8513-8. PMID 11438688 DOI: 10.1073/Pnas.141226698 |
0.814 |
|
| 2001 |
McLafferty FW, Horn DM, Breuker K, Ge Y, Lewis MA, Cerda B, Zubarev RA, Carpenter BK. Electron capture dissociation of gaseous multiply charged ions by Fourier-transform ion cyclotron resonance. Journal of the American Society For Mass Spectrometry. 12: 245-9. PMID 11281599 DOI: 10.1016/S1044-0305(00)00223-3 |
0.595 |
|
| 2001 |
Strauss E, Kinsland C, Ge Y, McLafferty FW, Begley TP. Phosphopantothenoylcysteine synthetase from Escherichia coli. Identification and characterization of the last unidentified coenzyme A biosynthetic enzyme in bacteria. The Journal of Biological Chemistry. 276: 13513-6. PMID 11278255 DOI: 10.1074/Jbc.C100033200 |
0.772 |
|
| 2001 |
Ge Y, Horn DM, McLafferty FW. Blackbody infrared radiative dissociation of larger (42 kDa) multiply charged proteins International Journal of Mass Spectrometry. 210: 203-214. DOI: 10.1016/S1387-3806(01)00394-3 |
0.615 |
|
| 2000 |
Horn DM, Ge Y, McLafferty FW. Activated ion electron capture dissociation for mass spectral sequencing of larger (42 kDa) proteins. Analytical Chemistry. 72: 4778-84. PMID 11055690 DOI: 10.1021/Ac000494I |
0.641 |
|
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