Olivier Delaneau - Publications

Affiliations: 
CNAM 

29 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any innacuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2018 Bycroft C, Freeman C, Petkova D, Band G, Elliott LT, Sharp K, Motyer A, Vukcevic D, Delaneau O, O'Connell J, Cortes A, Welsh S, Young A, Effingham M, McVean G, et al. The UK Biobank resource with deep phenotyping and genomic data. Nature. 562: 203-209. PMID 30305743 DOI: 10.1038/s41586-018-0579-z  0.68
2016 Astle WJ, Elding H, Jiang T, Allen D, Ruklisa D, Mann AL, Mead D, Bouman H, Riveros-Mckay F, Kostadima MA, Lambourne JJ, Sivapalaratnam S, Downes K, Kundu K, Bomba L, ... ... Delaneau O, et al. The Allelic Landscape of Human Blood Cell Trait Variation and Links to Common Complex Disease. Cell. 167: 1415-1429.e19. PMID 27863252 DOI: 10.1016/j.cell.2016.10.042  0.68
2016 McCarthy S, Das S, Kretzschmar W, Delaneau O, Wood AR, Teumer A, Kang HM, Fuchsberger C, Danecek P, Sharp K, Luo Y, Sidore C, Kwong A, Timpson N, Koskinen S, et al. A reference panel of 64,976 haplotypes for genotype imputation. Nature Genetics. PMID 27548312 DOI: 10.1038/ng.3643  0.52
2016 O'Connell J, Sharp K, Shrine N, Wain L, Hall I, Tobin M, Zagury JF, Delaneau O, Marchini J. Haplotype estimation for biobank-scale data sets. Nature Genetics. PMID 27270105 DOI: 10.1038/ng.3583  0.52
2016 Sharp K, Kretzschmar W, Delaneau O, Marchini J. Phasing for medical sequencing using rare variants and large haplotype reference panels. Bioinformatics (Oxford, England). 32: 1974-80. PMID 27153703 DOI: 10.1093/bioinformatics/btw065  0.68
2015 Wain LV, Shrine N, Miller S, Jackson VE, Ntalla I, Artigas MS, Billington CK, Kheirallah AK, Allen R, Cook JP, Probert K, Obeidat M, Bossé Y, Hao K, Postma DS, ... ... Delaneau O, et al. Novel insights into the genetics of smoking behaviour, lung function, and chronic obstructive pulmonary disease (UK BiLEVE): a genetic association study in UK Biobank. The Lancet. Respiratory Medicine. PMID 26423011 DOI: 10.1016/S2213-2600(15)00283-0  0.52
2015 Spadoni JL, Rucart P, Le Clerc S, van Manen D, Coulonges C, Ulveling D, Laville V, Labib T, Taing L, Delaneau O, Montes M, Schuitemaker H, Noirel J, Zagury JF. Identification of Genes Whose Expression Profile Is Associated with Non-Progression towards AIDS Using eQTLs. Plos One. 10: e0136989. PMID 26367535 DOI: 10.1371/journal.pone.0136989  0.84
2015 Waszak SM, Delaneau O, Gschwind AR, Kilpinen H, Raghav SK, Witwicki RM, Orioli A, Wiederkehr M, Panousis NI, Yurovsky A, Romano-Palumbo L, Planchon A, Bielser D, Padioleau I, Udin G, et al. Population Variation and Genetic Control of Modular Chromatin Architecture in Humans. Cell. 162: 1039-50. PMID 26300124 DOI: 10.1016/j.cell.2015.08.001  0.52
2015 Borel C, Ferreira PG, Santoni F, Delaneau O, Fort A, Popadin KY, Garieri M, Falconnet E, Ribaux P, Guipponi M, Padioleau I, Carninci P, Dermitzakis ET, Antonarakis SE. Biased allelic expression in human primary fibroblast single cells. American Journal of Human Genetics. 96: 70-80. PMID 25557783 DOI: 10.1016/j.ajhg.2014.12.001  0.52
2014 Delaneau O, Marchini J. Integrating sequence and array data to create an improved 1000 Genomes Project haplotype reference panel. Nature Communications. 5: 3934. PMID 25653097 DOI: 10.1038/ncomms4934  0.52
2014 Le Clerc S, Delaneau O, Coulonges C, Spadoni JL, Labib T, Laville V, Ulveling D, Noirel J, Montes M, Schächter F, Caillat-Zucman S, Zagury JF. Evidence after imputation for a role of MICA variants in nonprogression and elite control of HIV type 1 infection. The Journal of Infectious Diseases. 210: 1946-50. PMID 24939907 DOI: 10.1093/infdis/jiu342  0.84
2014 O'Connell J, Gurdasani D, Delaneau O, Pirastu N, Ulivi S, Cocca M, Traglia M, Huang J, Huffman JE, Rudan I, McQuillan R, Fraser RM, Campbell H, Polasek O, Asiki G, et al. A general approach for haplotype phasing across the full spectrum of relatedness. Plos Genetics. 10: e1004234. PMID 24743097 DOI: 10.1371/journal.pgen.1004234  0.52
2013 Delaneau O, Howie B, Cox AJ, Zagury JF, Marchini J. Haplotype estimation using sequencing reads. American Journal of Human Genetics. 93: 687-96. PMID 24094745 DOI: 10.1016/j.ajhg.2013.09.002  0.84
2013 McLaren PJ, Coulonges C, Ripke S, van den Berg L, Buchbinder S, Carrington M, Cossarizza A, Dalmau J, Deeks SG, Delaneau O, De Luca A, Goedert JJ, Haas D, Herbeck JT, Kathiresan S, et al. Association study of common genetic variants and HIV-1 acquisition in 6,300 infected cases and 7,200 controls. Plos Pathogens. 9: e1003515. PMID 23935489 DOI: 10.1371/journal.ppat.1003515  0.52
2013 Delaneau O, Zagury JF, Marchini J. Improved whole-chromosome phasing for disease and population genetic studies. Nature Methods. 10: 5-6. PMID 23269371 DOI: 10.1038/nmeth.2307  0.84
2013 Le Clerc S, Taing L, Ezzedine K, Latreille J, Delaneau O, Labib T, Coulonges C, Bernard A, Melak S, Carpentier W, Malvy D, Jdid R, Galan P, Hercberg S, Morizot F, et al. A genome-wide association study in Caucasian women points out a putative role of the STXBP5L gene in facial photoaging. The Journal of Investigative Dermatology. 133: 929-35. PMID 23223146 DOI: 10.1038/jid.2012.458  0.8
2012 Delaneau O, Zagury JF. Haplotype inference. Methods in Molecular Biology (Clifton, N.J.). 888: 177-96. PMID 22665282 DOI: 10.1007/978-1-61779-870-2_11  0.84
2012 Limou S, Delaneau O, van Manen D, An P, Sezgin E, Le Clerc S, Coulonges C, Troyer JL, Veldink JH, van den Berg LH, Spadoni JL, Taing L, Labib T, Montes M, Delfraissy JF, et al. Multicohort genomewide association study reveals a new signal of protection against HIV-1 acquisition. The Journal of Infectious Diseases. 205: 1155-62. PMID 22362864 DOI: 10.1093/infdis/jis028  0.52
2011 Delaneau O, Marchini J, Zagury JF. A linear complexity phasing method for thousands of genomes. Nature Methods. 9: 179-81. PMID 22138821 DOI: 10.1038/nmeth.1785  0.84
2011 van Manen D, Delaneau O, Kootstra NA, Boeser-Nunnink BD, Limou S, Bol SM, Burger JA, Zwinderman AH, Moerland PD, van 't Slot R, Zagury JF, van 't Wout AB, Schuitemaker H. Genome-wide association scan in HIV-1-infected individuals identifying variants influencing disease course. Plos One. 6: e22208. PMID 21811574 DOI: 10.1371/journal.pone.0022208  0.52
2011 Nikolova M, Carriere M, Jenabian MA, Limou S, Younas M, Kök A, Huë S, Seddiki N, Hulin A, Delaneau O, Schuitemaker H, Herbeck JT, Mullins JI, Muhtarova M, Bensussan A, et al. CD39/adenosine pathway is involved in AIDS progression. Plos Pathogens. 7: e1002110. PMID 21750674 DOI: 10.1371/journal.ppat.1002110  0.52
2011 Troyer JL, Nelson GW, Lautenberger JA, Chinn L, McIntosh C, Johnson RC, Sezgin E, Kessing B, Malasky M, Hendrickson SL, Li G, Pontius J, Tang M, An P, Winkler CA, ... ... Delaneau O, et al. Genome-wide association study implicates PARD3B-based AIDS restriction. The Journal of Infectious Diseases. 203: 1491-502. PMID 21502085 DOI: 10.1093/infdis/jir046  0.52
2011 Le Clerc S, Coulonges C, Delaneau O, Van Manen D, Herbeck JT, Limou S, An P, Martinson JJ, Spadoni JL, Therwath A, Veldink JH, van den Berg LH, Taing L, Labib T, Mellak S, et al. Screening low-frequency SNPS from genome-wide association study reveals a new risk allele for progression to AIDS. Journal of Acquired Immune Deficiency Syndromes (1999). 56: 279-84. PMID 21107268 DOI: 10.1097/QAI.0b013e318204982b  0.52
2010 Limou S, Coulonges C, Herbeck JT, van Manen D, An P, Le Clerc S, Delaneau O, Diop G, Taing L, Montes M, van't Wout AB, Gottlieb GS, Therwath A, Rouzioux C, Delfraissy JF, et al. Multiple-cohort genetic association study reveals CXCR6 as a new chemokine receptor involved in long-term nonprogression to AIDS. The Journal of Infectious Diseases. 202: 908-15. PMID 20704485 DOI: 10.1086/655782  0.52
2009 Clerc SL, Limou S, Coulonges C, Carpentier W, Dina C, Taing L, Delaneau O, Labib T, Sladek R, Group AG, Deveau C, Guillemain H, Ratsimandresy R, Montes M, Spadoni JL, et al. Genomewide Association Study of a Rapid Progression Cohort Identifies New Susceptibility Alleles for AIDS (ANRS Genomewide Association Study 03) Journal of Infectious Diseases. 200: 1194-1201. PMID 19754311 DOI: 10.1086/605892  0.52
2009 Limou S, Le Clerc S, Coulonges C, Carpentier W, Dina C, Delaneau O, Labib T, Taing L, Sladek R, Deveau C, Ratsimandresy R, Montes M, Spadoni JL, Lelièvre JD, Lévy Y, et al. Genomewide association study of an AIDS-nonprogression cohort emphasizes the role played by HLA genes (ANRS genomewide association study 02) Journal of Infectious Diseases. 199: 419-426. PMID 19115949 DOI: 10.1086/596067  0.52
2008 Delaneau O, Coulonges C, Zagury JF. Shape-IT: new rapid and accurate algorithm for haplotype inference. Bmc Bioinformatics. 9: 540. PMID 19087329 DOI: 10.1186/1471-2105-9-540  0.84
2007 Delaneau O, Coulonges C, Boelle PY, Nelson G, Spadoni JL, Zagury JF. ISHAPE: new rapid and accurate software for haplotyping. Bmc Bioinformatics. 8: 205. PMID 17573965 DOI: 10.1186/1471-2105-8-205  0.84
2006 Coulonges C, Delaneau O, Girard M, Do H, Adkins R, Spadoni JL, Zagury JF. Computation of haplotypes on SNPs subsets: advantage of the "global method". Bmc Genetics. 7: 50. PMID 17067372 DOI: 10.1186/1471-2156-7-50  0.84
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