| Year |
Citation |
Score |
| 2023 |
Dhanda SK, Mahajan S, Manoharan M. Neoepitopes prediction strategies: an integration of cancer genomics and immunoinformatics approaches. Briefings in Functional Genomics. 22: 1-8. PMID 36398967 DOI: 10.1093/bfgp/elac041 |
0.652 |
|
| 2021 |
Mahajan S, Kode V, Bhojak K, Karunakaran C, Lee K, Manoharan M, Ramesh A, Hv S, Srivastava A, Sathian R, Khan T, Kumar P, Gupta R, Chakraborty P, Chaudhuri A. Immunodominant T-cell epitopes from the SARS-CoV-2 spike antigen reveal robust pre-existing T-cell immunity in unexposed individuals. Scientific Reports. 11: 13164. PMID 34162945 DOI: 10.1038/s41598-021-92521-4 |
0.658 |
|
| 2019 |
Jensen KK, Rantos V, Jappe EC, Olsen TH, Jespersen MC, Jurtz V, Jessen LE, Lanzarotti E, Mahajan S, Peters B, Nielsen M, Marcatili P. TCRpMHCmodels: Structural modelling of TCR-pMHC class I complexes. Scientific Reports. 9: 14530. PMID 31601838 DOI: 10.1038/S41598-019-50932-4 |
0.347 |
|
| 2019 |
Mahajan S, Yan Z, Jespersen MC, Jensen KK, Marcatili P, Nielsen M, Sette A, Peters B. Benchmark datasets of immune receptor-epitope structural complexes. Bmc Bioinformatics. 20: 490. PMID 31601176 DOI: 10.1186/S12859-019-3109-6 |
0.381 |
|
| 2019 |
Dhanda SK, Mahajan S, Paul S, Yan Z, Kim H, Jespersen MC, Jurtz V, Andreatta M, Greenbaum JA, Marcatili P, Sette A, Nielsen M, Peters B. IEDB-AR: immune epitope database-analysis resource in 2019. Nucleic Acids Research. PMID 31114900 DOI: 10.1093/Nar/Gkz452 |
0.311 |
|
| 2019 |
Jespersen MC, Mahajan S, Peters B, Nielsen M, Marcatili P. Antibody Specific B-Cell Epitope Predictions: Leveraging Information From Antibody-Antigen Protein Complexes. Frontiers in Immunology. 10: 298. PMID 30863406 DOI: 10.3389/Fimmu.2019.00298 |
0.344 |
|
| 2017 |
Vetrivel I, Mahajan S, Tyagi M, Hoffmann L, Sanejouand YH, Srinivasan N, de Brevern AG, Cadet F, Offmann B. Knowledge-based prediction of protein backbone conformation using a structural alphabet. Plos One. 12: e0186215. PMID 29161266 DOI: 10.1371/Journal.Pone.0186215 |
0.59 |
|
| 2017 |
Mahajan S, Sanejouand YH. Jumping between protein conformers using normal modes. Journal of Computational Chemistry. PMID 28470912 DOI: 10.1002/Jcc.24803 |
0.399 |
|
| 2017 |
Fleri W, Paul S, Dhanda SK, Mahajan S, Xu X, Peters B, Sette A. The Immune Epitope Database and Analysis Resource in Epitope Discovery and Synthetic Vaccine Design. Frontiers in Immunology. 8: 278. PMID 28352270 DOI: 10.3389/Fimmu.2017.00278 |
0.331 |
|
| 2015 |
Mahajan S, Sanejouand YH. On the relationship between low-frequency normal modes and the large-scale conformational changes of proteins Archives of Biochemistry and Biophysics. 567: 59-65. PMID 25562404 DOI: 10.1016/J.Abb.2014.12.020 |
0.434 |
|
| 2015 |
Mahajan S, de Brevern AG, Sanejouand YH, Srinivasan N, Offmann B. Use of a structural alphabet to find compatible folds for amino acid sequences. Protein Science : a Publication of the Protein Society. 24: 145-53. PMID 25297700 DOI: 10.1002/Pro.2581 |
0.746 |
|
| 2014 |
Mahajan S, de Brevern AG, Offmann B, Srinivasan N. Correlation between local structural dynamics of proteins inferred from NMR ensembles and evolutionary dynamics of homologues of known structure. Journal of Biomolecular Structure & Dynamics. 32: 751-8. PMID 23730714 DOI: 10.1080/07391102.2013.789989 |
0.742 |
|
| 2013 |
Mahajan S, Agarwal G, Iftekhar M, Offmann B, de Brevern AG, Srinivasan N. DoSA: Database of Structural Alignments. Database : the Journal of Biological Databases and Curation. 2013: bat048. PMID 23846594 DOI: 10.1093/Database/Bat048 |
0.775 |
|
| 2012 |
Swapna LS, Mahajan S, de Brevern AG, Srinivasan N. Comparison of tertiary structures of proteins in protein-protein complexes with unbound forms suggests prevalence of allostery in signalling proteins. Bmc Structural Biology. 12: 6. PMID 22554255 DOI: 10.1186/1472-6807-12-6 |
0.517 |
|
| 2011 |
Agarwal G, Mahajan S, Srinivasan N, de Brevern AG. Identification of local conformational similarity in structurally variable regions of homologous proteins using protein blocks. Plos One. 6: e17826. PMID 21445259 DOI: 10.1371/Journal.Pone.0017826 |
0.622 |
|
| 2011 |
Srinivasan N, Agarwal G, Bhaskara RM, Gadkari R, Krishnadev O, Lakshmi B, Mahajan S, Mohanty S, Mudgal R, Rakshambikai R, Sandhya S, Sudha G, Swapna L, Tyagi N. Influence of Genomic and Other Biological Data Sets in the Understanding of Protein Structures, Functions and Interactions International Journal of Knowledge Discovery in Bioinformatics. 2: 24-44. DOI: 10.4018/Jkdb.2011010102 |
0.531 |
|
| 2010 |
Joseph AP, Agarwal G, Mahajan S, Gelly JC, Swapna LS, Offmann B, Cadet F, Bornot A, Tyagi M, Valadié H, Schneider B, Etchebest C, Srinivasan N, De Brevern AG. A short survey on protein blocks. Biophysical Reviews. 2: 137-147. PMID 21731588 DOI: 10.1007/S12551-010-0036-1 |
0.736 |
|
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